Wall clock time and date at job start Sun Mar 7 2021 11:43:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42897 * 114.00086 * 2 1 4 4 C 1.52993 * 112.91045 * 294.01232 * 3 2 1 5 5 F 1.39897 * 109.47488 * 196.28195 * 4 3 2 6 6 F 1.39905 * 109.46977 * 316.27946 * 4 3 2 7 7 F 1.39894 * 109.47331 * 76.27709 * 4 3 2 8 8 C 1.53785 * 113.61403 * 162.76017 * 3 2 1 9 9 C 1.53787 * 87.08274 * 270.88538 * 8 3 2 10 10 H 1.08994 * 113.69382 * 89.12266 * 9 8 3 11 11 N 1.46496 * 113.61557 * 220.02309 * 9 8 3 12 12 C 1.34781 * 119.99606 * 252.49456 * 11 9 8 13 13 O 1.21576 * 119.99936 * 359.97438 * 12 11 9 14 14 C 1.47605 * 119.99734 * 179.97438 * 12 11 9 15 15 C 1.39713 * 120.09009 * 359.96005 * 14 12 11 16 16 C 1.37720 * 119.91377 * 180.02562 * 15 14 12 17 17 C 1.50694 * 119.95666 * 180.02562 * 16 15 14 18 18 C 1.38976 * 120.08701 * 0.03915 * 16 15 14 19 19 O 1.35707 * 119.91242 * 180.02562 * 18 16 15 20 20 C 1.39021 * 120.17326 * 359.97438 * 18 16 15 21 21 C 1.50708 * 119.95176 * 179.97438 * 20 18 16 22 22 O 1.42895 * 109.47026 * 285.02342 * 21 20 18 23 23 Si 1.86299 * 109.46976 * 165.02592 * 21 20 18 24 24 C 1.37670 * 120.09120 * 0.02562 * 20 18 16 25 25 C 1.53781 * 87.07772 * 334.56842 * 9 8 3 26 26 H 1.08998 * 109.47618 * 183.54921 * 1 2 3 27 27 H 1.09000 * 109.47261 * 303.55478 * 1 2 3 28 28 H 1.08998 * 109.47013 * 63.55000 * 1 2 3 29 29 H 1.08994 * 113.61700 * 156.33775 * 8 3 2 30 30 H 1.09003 * 113.61814 * 25.42785 * 8 3 2 31 31 H 0.96998 * 120.00366 * 72.48863 * 11 9 8 32 32 H 1.08002 * 120.04094 * 0.03448 * 15 14 12 33 33 H 1.08999 * 109.47416 * 270.01754 * 17 16 15 34 34 H 1.09000 * 109.47420 * 30.02294 * 17 16 15 35 35 H 1.09001 * 109.47129 * 150.02184 * 17 16 15 36 36 H 0.96699 * 114.00027 * 269.97787 * 19 18 16 37 37 H 1.08995 * 109.46850 * 45.02649 * 21 20 18 38 38 H 0.96704 * 114.00123 * 179.97438 * 22 21 20 39 39 H 1.48499 * 110.00021 * 298.68264 * 23 21 20 40 40 H 1.48502 * 109.99963 * 59.99827 * 23 21 20 41 41 H 1.08007 * 120.04621 * 179.72092 * 24 20 18 42 42 H 1.09006 * 113.61581 * 139.98184 * 25 9 8 43 43 H 1.09003 * 113.61320 * 270.88302 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7286 2.0828 -1.2873 5 9 2.6089 3.1661 -1.3800 6 9 1.9084 1.2402 -2.3896 7 9 0.4110 2.5527 -1.2696 8 6 3.4902 1.3208 0.4176 9 6 2.9985 1.4816 1.8659 10 1 2.8251 0.5348 2.3772 11 7 3.8011 2.4171 2.6576 12 6 4.6256 1.9527 3.6174 13 8 4.7029 0.7575 3.8262 14 6 5.4347 2.8952 4.4147 15 6 5.3478 4.2690 4.1757 16 6 6.1047 5.1451 4.9215 17 6 6.0114 6.6270 4.6648 18 6 6.9547 4.6642 5.9103 19 8 7.6986 5.5307 6.6434 20 6 7.0442 3.2979 6.1510 21 6 7.9680 2.7819 7.2241 22 8 9.3192 2.8554 6.7651 23 14 7.5398 1.0110 7.6132 24 6 6.2908 2.4157 5.4098 25 6 1.7222 2.1079 1.2798 26 1 -0.3634 -1.0256 0.0636 27 1 -0.3634 0.5680 0.8564 28 1 -0.3633 0.4577 -0.9201 29 1 4.0401 2.1848 0.0448 30 1 4.0057 0.3781 0.2337 31 1 3.7391 3.3707 2.4912 32 1 4.6879 4.6434 3.4071 33 1 6.7489 6.9131 3.9149 34 1 5.0124 6.8711 4.3036 35 1 6.2055 7.1690 5.5904 36 1 8.5678 5.7209 6.2648 37 1 7.8559 3.3886 8.1226 38 1 9.9702 2.5390 7.4065 39 1 6.1472 0.9251 8.1217 40 1 7.6886 0.1733 6.3961 41 1 6.3642 1.3540 5.5944 42 1 0.8102 1.8008 1.7918 43 1 1.7888 3.1873 1.1426 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16772210_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:43:12 Heat of formation + Delta-G solvation = -237.527923 kcal Electronic energy + Delta-G solvation = -33442.709752 eV Core-core repulsion = 28234.491027 eV Total energy + Delta-G solvation = -5208.218725 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -51.23976 -48.79016 -48.66355 -41.98152 -41.33755 -40.06919 -37.81480 -37.67254 -37.34084 -34.67002 -34.10909 -31.89115 -29.11750 -28.24187 -28.15537 -26.96708 -26.88327 -25.37743 -23.54216 -22.08260 -21.66238 -21.31424 -19.81458 -19.57644 -19.52566 -19.27573 -18.64741 -18.44358 -17.82486 -17.31438 -16.80206 -16.70326 -16.57700 -16.01877 -15.91647 -15.87830 -15.58682 -15.54593 -15.37470 -15.17647 -15.14538 -14.96057 -14.85810 -14.80987 -14.62625 -14.46177 -13.96887 -13.88818 -13.71320 -13.57373 -13.51065 -13.20472 -13.04654 -12.99801 -12.83214 -12.67485 -12.59377 -11.94150 -11.87659 -11.55937 -11.18397 -11.01559 -10.37047 -10.34891 -10.06561 -9.73697 -4.99769 -0.46377 -0.01056 1.25117 1.40291 1.52527 1.67518 1.89162 1.97245 2.00248 2.41985 2.49540 2.54703 2.73800 3.02635 3.17003 3.21505 3.31058 3.41944 3.44646 3.55471 3.70157 3.82866 3.86757 4.02932 4.09038 4.12350 4.17590 4.23465 4.27155 4.34120 4.38752 4.47745 4.55488 4.56157 4.58928 4.64945 4.70999 4.92267 5.00380 5.02411 5.18796 5.20043 5.44737 5.58012 6.24322 6.50799 6.53304 7.00858 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.329 6.329 3 C 0.045 3.955 4 C 0.440 3.560 5 F -0.175 7.175 6 F -0.172 7.172 7 F -0.180 7.180 8 C -0.132 4.132 9 C 0.140 3.860 10 H 0.133 0.867 11 N -0.716 5.716 12 C 0.565 3.435 13 O -0.528 6.528 14 C -0.140 4.140 15 C -0.065 4.065 16 C -0.116 4.116 17 C -0.114 4.114 18 C 0.163 3.837 19 O -0.488 6.488 20 C -0.105 4.105 21 C -0.065 4.065 22 O -0.547 6.547 23 Si 0.678 3.322 24 C -0.052 4.052 25 C -0.162 4.162 26 H 0.104 0.896 27 H 0.056 0.944 28 H 0.053 0.947 29 H 0.116 0.884 30 H 0.103 0.897 31 H 0.403 0.597 32 H 0.134 0.866 33 H 0.074 0.926 34 H 0.071 0.929 35 H 0.078 0.922 36 H 0.400 0.600 37 H 0.081 0.919 38 H 0.385 0.615 39 H -0.252 1.252 40 H -0.245 1.245 41 H 0.140 0.860 42 H 0.102 0.898 43 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.025 3.607 2.713 4.629 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.247 6.247 3 C 0.002 3.998 4 C 0.386 3.614 5 F -0.156 7.156 6 F -0.153 7.153 7 F -0.162 7.162 8 C -0.171 4.171 9 C 0.035 3.965 10 H 0.150 0.850 11 N -0.368 5.368 12 C 0.353 3.647 13 O -0.404 6.404 14 C -0.144 4.144 15 C -0.084 4.084 16 C -0.117 4.117 17 C -0.171 4.171 18 C 0.118 3.882 19 O -0.299 6.299 20 C -0.105 4.105 21 C -0.175 4.175 22 O -0.354 6.354 23 Si 0.579 3.421 24 C -0.071 4.071 25 C -0.200 4.200 26 H 0.122 0.878 27 H 0.074 0.926 28 H 0.072 0.928 29 H 0.134 0.866 30 H 0.122 0.878 31 H 0.239 0.761 32 H 0.152 0.848 33 H 0.093 0.907 34 H 0.090 0.910 35 H 0.097 0.903 36 H 0.259 0.741 37 H 0.099 0.901 38 H 0.233 0.767 39 H -0.177 1.177 40 H -0.170 1.170 41 H 0.157 0.843 42 H 0.120 0.880 43 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -0.136 2.148 2.506 3.303 hybrid contribution -0.192 1.363 -1.011 1.708 sum -0.328 3.511 1.495 3.830 Atomic orbital electron populations 1.23157 0.79316 1.04549 1.01465 1.88135 1.21247 1.21356 1.93940 1.23533 0.99860 0.86566 0.89864 1.21027 0.74343 0.78641 0.87426 1.93176 1.68999 1.56876 1.96587 1.93231 1.94888 1.70709 1.56472 1.93198 1.36741 1.89393 1.96826 1.23741 0.91387 1.06123 0.95839 1.22280 0.89283 0.94934 0.89985 0.84972 1.45795 1.43785 1.10473 1.36776 1.18160 0.79164 0.88028 0.79317 1.90824 1.65759 1.15928 1.67912 1.19733 1.01326 0.93416 0.99877 1.21092 0.97726 0.91359 0.98231 1.20204 0.98392 0.97432 0.95629 1.20740 1.02933 0.90134 1.03254 1.18270 0.92821 0.87404 0.89738 1.84641 1.32339 1.63188 1.49778 1.19615 0.99413 0.92796 0.98711 1.24533 0.84549 1.11648 0.96810 1.86426 1.14503 1.88743 1.45713 0.95397 0.84743 0.76749 0.85183 1.20985 0.93477 0.99859 0.92734 1.24016 1.00529 1.01298 0.94201 0.87815 0.92570 0.92841 0.86601 0.87807 0.76070 0.84843 0.90706 0.90983 0.90301 0.74128 0.90113 0.76711 1.17678 1.16966 0.84313 0.87993 0.87289 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.33 101.05 1.04 1.03 16 2 O -0.33 -0.28 10.33 -35.23 -0.36 -0.64 16 3 C 0.05 -0.02 0.85 -89.81 -0.08 -0.09 16 4 C 0.44 0.37 2.52 37.15 0.09 0.46 16 5 F -0.17 -0.10 15.81 2.25 0.04 -0.07 16 6 F -0.17 -0.47 17.10 2.25 0.04 -0.43 16 7 F -0.18 -0.18 15.39 2.25 0.03 -0.14 16 8 C -0.13 0.10 7.13 -25.91 -0.18 -0.09 16 9 C 0.14 -0.10 4.17 -67.12 -0.28 -0.38 16 10 H 0.13 0.14 7.46 -51.93 -0.39 -0.25 16 11 N -0.72 0.60 5.30 -54.04 -0.29 0.31 16 12 C 0.57 1.55 7.76 -12.44 -0.10 1.46 16 13 O -0.53 -3.49 15.94 5.30 0.08 -3.40 16 14 C -0.14 -0.29 5.88 -104.96 -0.62 -0.91 16 15 C -0.07 0.03 9.18 -39.22 -0.36 -0.33 16 16 C -0.12 0.00 5.89 -104.54 -0.62 -0.62 16 17 C -0.11 0.24 9.78 36.00 0.35 0.59 16 18 C 0.16 0.21 6.66 -39.02 -0.26 -0.05 16 19 O -0.49 -0.02 11.84 -18.83 -0.22 -0.24 16 20 C -0.10 -0.24 5.30 -104.54 -0.55 -0.80 16 21 C -0.06 -0.02 2.36 36.01 0.09 0.07 16 22 O -0.55 0.25 12.86 -35.23 -0.45 -0.21 16 23 Si 0.68 0.02 30.20 -169.99 -5.13 -5.11 16 24 C -0.05 -0.18 8.19 -39.22 -0.32 -0.50 16 25 C -0.16 0.38 6.66 -25.92 -0.17 0.21 16 26 H 0.10 -0.24 8.14 -51.93 -0.42 -0.67 16 27 H 0.06 -0.14 6.58 -51.93 -0.34 -0.49 16 28 H 0.05 -0.04 6.63 -51.93 -0.34 -0.39 16 29 H 0.12 -0.21 7.01 -51.93 -0.36 -0.57 16 30 H 0.10 0.01 8.14 -51.93 -0.42 -0.42 16 31 H 0.40 -1.49 6.75 -40.82 -0.28 -1.77 16 32 H 0.13 -0.51 6.39 -52.49 -0.34 -0.84 16 33 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.07 -0.23 8.08 -51.93 -0.42 -0.65 16 35 H 0.08 -0.12 7.52 -51.93 -0.39 -0.51 16 36 H 0.40 -1.34 9.06 45.56 0.41 -0.92 16 37 H 0.08 -0.05 7.82 -51.93 -0.41 -0.46 16 38 H 0.38 -2.00 8.74 45.56 0.40 -1.60 16 39 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 40 H -0.24 -0.85 6.74 56.52 0.38 -0.47 16 41 H 0.14 0.65 4.47 -52.48 -0.23 0.41 16 42 H 0.10 -0.30 6.68 -51.93 -0.35 -0.65 16 43 H 0.11 -0.42 8.03 -51.93 -0.42 -0.84 16 LS Contribution 366.95 15.07 5.53 5.53 Total: 0.00 -9.79 366.95 -6.64 -16.43 By element: Atomic # 1 Polarization: -8.14 SS G_CDS: -3.94 Total: -12.08 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -1.96 Total: 0.05 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: -0.29 Total: 0.31 kcal Atomic # 8 Polarization: -3.54 SS G_CDS: -0.96 Total: -4.50 kcal Atomic # 9 Polarization: -0.74 SS G_CDS: 0.11 Total: -0.63 kcal Atomic # 14 Polarization: 0.02 SS G_CDS: -5.13 Total: -5.11 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -9.79 -6.64 -16.43 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -221.101 kcal (2) G-P(sol) polarization free energy of solvation -9.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -230.890 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.638 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.427 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.528 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds