Wall clock time and date at job start Sun Mar 7 2021 11:43:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42902 * 113.99976 * 2 1 4 4 C 1.53000 * 112.84860 * 68.03634 * 3 2 1 5 5 F 1.39902 * 109.46797 * 283.44297 * 4 3 2 6 6 F 1.39897 * 109.47536 * 43.44754 * 4 3 2 7 7 F 1.39903 * 109.47147 * 163.45030 * 4 3 2 8 8 C 1.53782 * 113.61318 * 296.83426 * 3 2 1 9 9 C 1.53783 * 87.08090 * 270.88105 * 8 3 2 10 10 H 1.09003 * 113.60697 * 89.20465 * 9 8 3 11 11 N 1.46496 * 113.61343 * 220.01566 * 9 8 3 12 12 C 1.34775 * 120.00009 * 205.00538 * 11 9 8 13 13 O 1.21698 * 119.99928 * 0.02562 * 12 11 9 14 14 C 1.46676 * 120.00103 * 180.02562 * 12 11 9 15 15 C 1.37878 * 126.23206 * 179.97438 * 14 12 11 16 16 C 1.50701 * 126.45789 * 359.97438 * 15 14 12 17 17 C 1.39839 * 107.08317 * 180.02562 * 15 14 12 18 18 C 1.35455 * 107.86664 * 0.02562 * 17 15 14 19 19 C 1.50696 * 125.56627 * 179.97438 * 18 17 15 20 20 O 1.42894 * 109.47184 * 245.02950 * 19 18 17 21 21 Si 1.86307 * 109.46825 * 5.02839 * 19 18 17 22 22 N 1.35539 * 108.87110 * 0.22819 * 18 17 15 23 23 C 1.53773 * 87.08383 * 334.57077 * 9 8 3 24 24 H 1.08996 * 109.47263 * 299.78475 * 1 2 3 25 25 H 1.09001 * 109.46764 * 59.78397 * 1 2 3 26 26 H 1.08999 * 109.47031 * 179.77706 * 1 2 3 27 27 H 1.09006 * 113.60803 * 156.33595 * 8 3 2 28 28 H 1.08998 * 113.69108 * 25.44511 * 8 3 2 29 29 H 0.96998 * 119.99888 * 25.00549 * 11 9 8 30 30 H 1.08996 * 109.46794 * 269.99331 * 16 15 14 31 31 H 1.08996 * 109.47102 * 29.99417 * 16 15 14 32 32 H 1.08996 * 109.46616 * 149.99554 * 16 15 14 33 33 H 1.07997 * 126.06633 * 180.02562 * 17 15 14 34 34 H 1.08999 * 109.46967 * 125.02267 * 19 18 17 35 35 H 0.96707 * 113.99782 * 180.02562 * 20 19 18 36 36 H 1.48495 * 110.00017 * 299.99643 * 21 19 18 37 37 H 1.48500 * 110.00048 * 61.31840 * 21 19 18 38 38 H 0.96999 * 125.67723 * 179.75337 * 22 18 17 39 39 H 1.08997 * 113.61887 * 139.97898 * 23 9 8 40 40 H 1.09002 * 113.61134 * 270.88379 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7701 2.0627 1.3076 5 9 0.4544 2.5373 1.3367 6 9 1.9794 1.2018 2.3903 7 9 2.6569 3.1415 1.3914 8 6 1.6797 2.1269 -1.2573 9 6 2.9357 1.5097 -1.8949 10 1 2.7449 0.5705 -2.4143 11 7 3.7115 2.4571 -2.6991 12 6 4.5033 2.0073 -3.6927 13 8 4.5734 0.8142 -3.9221 14 6 5.2805 2.9558 -4.4975 15 6 6.1269 2.6389 -5.5388 16 6 6.4261 1.2573 -6.0609 17 6 6.6563 3.8412 -6.0182 18 6 6.1361 4.8490 -5.2776 19 6 6.4393 6.3144 -5.4556 20 8 7.1150 6.8053 -4.2962 21 14 7.5247 6.5466 -6.9519 22 7 5.3027 4.3239 -4.3466 23 6 3.4754 1.3274 -0.4666 24 1 -0.3633 0.5105 0.8919 25 1 -0.3633 0.5172 -0.8881 26 1 -0.3633 -1.0276 -0.0040 27 1 1.7511 3.2041 -1.1063 28 1 0.7512 1.8283 -1.7440 29 1 3.6553 3.4081 -2.5165 30 1 7.2812 0.8441 -5.5260 31 1 5.5581 0.6157 -5.9093 32 1 6.6554 1.3129 -7.1250 33 1 7.3558 3.9473 -6.8341 34 1 5.5081 6.8639 -5.5935 35 1 7.3414 7.7444 -4.3410 36 1 8.7976 5.8022 -6.7764 37 1 6.8208 6.0690 -8.1691 38 1 4.8033 4.8283 -3.6856 39 1 3.9965 0.3823 -0.3140 40 1 4.0377 2.1860 -0.0995 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_13940406.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:43:48 Heat of formation + Delta-G solvation = -183.245729 kcal Electronic energy + Delta-G solvation = -29865.923379 eV Core-core repulsion = 25041.540928 eV Total energy + Delta-G solvation = -4824.382451 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.118 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -51.31465 -48.84595 -48.78191 -42.74380 -41.56553 -39.98065 -37.67478 -37.41126 -34.76628 -33.57110 -31.84923 -29.24185 -28.32911 -28.17157 -26.93596 -26.84223 -24.25863 -22.51799 -21.78537 -21.44706 -20.49249 -19.79915 -19.60645 -19.55598 -19.22550 -18.45838 -17.42163 -17.16408 -16.79839 -16.52787 -16.36922 -15.94162 -15.74871 -15.68042 -15.61977 -15.27675 -15.20818 -15.15225 -15.00441 -14.93533 -14.91457 -14.71806 -14.38460 -13.93909 -13.78369 -13.72178 -13.39528 -13.35891 -13.23602 -13.08910 -12.72311 -12.63223 -12.53862 -12.01808 -11.82282 -11.29090 -11.01865 -10.45256 -10.40143 -9.99724 -9.32411 -4.93333 0.15946 1.19445 1.33889 1.37691 1.74930 1.85264 1.99850 2.03829 2.10787 2.11092 2.47936 2.54902 2.76867 3.19086 3.30049 3.32092 3.44470 3.67693 3.82846 3.91922 3.93984 4.07497 4.18526 4.23409 4.31095 4.35923 4.39009 4.51470 4.53284 4.61316 4.66195 4.72375 4.76630 4.77517 5.00471 5.12949 5.22485 5.47080 5.65989 5.67335 6.18585 6.36393 6.85355 6.93716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.004 3.996 2 O -0.349 6.349 3 C 0.044 3.956 4 C 0.439 3.561 5 F -0.181 7.181 6 F -0.186 7.186 7 F -0.174 7.174 8 C -0.148 4.148 9 C 0.142 3.858 10 H 0.116 0.884 11 N -0.705 5.705 12 C 0.595 3.405 13 O -0.554 6.554 14 C -0.066 4.066 15 C -0.086 4.086 16 C -0.090 4.090 17 C -0.233 4.233 18 C 0.075 3.925 19 C -0.061 4.061 20 O -0.565 6.565 21 Si 0.808 3.192 22 N -0.506 5.506 23 C -0.133 4.133 24 H 0.048 0.952 25 H 0.072 0.928 26 H 0.112 0.888 27 H 0.129 0.871 28 H 0.114 0.886 29 H 0.412 0.588 30 H 0.067 0.933 31 H 0.070 0.930 32 H 0.073 0.927 33 H 0.141 0.859 34 H 0.108 0.892 35 H 0.410 0.590 36 H -0.301 1.301 37 H -0.290 1.290 38 H 0.432 0.568 39 H 0.092 0.908 40 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.372 8.968 -1.838 9.456 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 O -0.267 6.267 3 C 0.000 4.000 4 C 0.384 3.616 5 F -0.162 7.162 6 F -0.168 7.168 7 F -0.155 7.155 8 C -0.186 4.186 9 C 0.037 3.963 10 H 0.134 0.866 11 N -0.356 5.356 12 C 0.384 3.616 13 O -0.432 6.432 14 C -0.179 4.179 15 C -0.094 4.094 16 C -0.147 4.147 17 C -0.257 4.257 18 C -0.045 4.045 19 C -0.170 4.170 20 O -0.376 6.376 21 Si 0.713 3.287 22 N -0.104 5.104 23 C -0.171 4.171 24 H 0.067 0.933 25 H 0.090 0.910 26 H 0.130 0.870 27 H 0.147 0.853 28 H 0.132 0.868 29 H 0.249 0.751 30 H 0.086 0.914 31 H 0.089 0.911 32 H 0.092 0.908 33 H 0.158 0.842 34 H 0.126 0.874 35 H 0.262 0.738 36 H -0.228 1.228 37 H -0.218 1.218 38 H 0.273 0.727 39 H 0.110 0.890 40 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -2.031 7.029 -2.271 7.661 hybrid contribution -0.777 0.245 1.163 1.420 sum -2.808 7.274 -1.109 7.876 Atomic orbital electron populations 1.23314 0.78397 1.05400 1.01963 1.88117 1.22395 1.22154 1.93988 1.23575 1.00245 0.86633 0.89505 1.21253 0.74114 0.78346 0.87890 1.93192 1.36877 1.89207 1.96927 1.93198 1.94570 1.70138 1.58848 1.93175 1.68604 1.57110 1.96650 1.24021 1.00247 1.01944 0.92349 1.22165 0.90491 0.94269 0.89364 0.86602 1.45606 1.45493 1.10987 1.33537 1.17058 0.78451 0.86829 0.79279 1.90837 1.66061 1.16613 1.69722 1.20101 1.09601 0.83064 1.05172 1.20138 0.97112 0.96430 0.95740 1.20346 1.02359 0.91296 1.00728 1.20637 1.07459 0.91891 1.05749 1.20403 0.96028 0.94939 0.93137 1.24603 1.04319 0.88316 0.99797 1.86433 1.79117 1.32935 1.39068 0.94274 0.75142 0.87557 0.71766 1.41770 1.35883 1.05195 1.27574 1.23771 0.91771 1.05971 0.95632 0.93286 0.90983 0.87011 0.85322 0.86815 0.75072 0.91385 0.91149 0.90775 0.84197 0.87403 0.73755 1.22848 1.21756 0.72679 0.88964 0.85662 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.43 113.37 1.18 1.17 16 2 O -0.35 -0.61 10.32 -148.98 -1.54 -2.15 16 3 C 0.04 -0.05 0.85 -10.27 -0.01 -0.06 16 4 C 0.44 0.60 2.57 71.98 0.18 0.78 16 5 F -0.18 -0.23 15.35 44.97 0.69 0.46 16 6 F -0.19 -1.11 17.09 44.97 0.77 -0.34 16 7 F -0.17 -0.09 15.83 44.97 0.71 0.62 16 8 C -0.15 0.93 6.65 31.12 0.21 1.14 16 9 C 0.14 -0.29 4.17 45.52 0.19 -0.10 16 10 H 0.12 0.27 7.46 -2.39 -0.02 0.25 16 11 N -0.71 1.80 5.35 -444.01 -2.38 -0.57 16 12 C 0.60 3.33 7.79 86.45 0.67 4.00 16 13 O -0.55 -7.22 14.40 -4.34 -0.06 -7.28 16 14 C -0.07 -0.35 7.06 40.35 0.28 -0.07 16 15 C -0.09 -0.73 6.21 -19.56 -0.12 -0.85 16 16 C -0.09 -0.70 9.83 71.24 0.70 0.00 16 17 C -0.23 -1.54 9.27 22.01 0.20 -1.33 16 18 C 0.07 0.15 6.50 41.34 0.27 0.42 16 19 C -0.06 0.32 3.07 71.23 0.22 0.54 16 20 O -0.56 3.10 12.86 -148.98 -1.92 1.18 16 21 Si 0.81 -4.03 30.56 68.60 2.10 -1.94 16 22 N -0.51 0.21 5.99 -171.93 -1.03 -0.82 16 23 C -0.13 0.20 7.13 31.12 0.22 0.42 16 24 H 0.05 -0.10 6.45 -2.39 -0.02 -0.11 16 25 H 0.07 -0.46 6.57 -2.39 -0.02 -0.48 16 26 H 0.11 -0.55 8.14 -2.39 -0.02 -0.57 16 27 H 0.13 -1.33 8.04 -2.38 -0.02 -1.35 16 28 H 0.11 -0.92 6.59 -2.39 -0.02 -0.94 16 29 H 0.41 -3.73 7.86 -92.71 -0.73 -4.46 16 30 H 0.07 0.52 8.14 -2.39 -0.02 0.50 16 31 H 0.07 0.73 6.48 -2.39 -0.02 0.71 16 32 H 0.07 0.36 8.14 -2.39 -0.02 0.34 16 33 H 0.14 0.83 6.19 -2.91 -0.02 0.81 16 34 H 0.11 -1.19 7.96 -2.39 -0.02 -1.21 16 35 H 0.41 -6.57 8.74 -74.05 -0.65 -7.21 16 36 H -0.30 -1.16 7.11 99.48 0.71 -0.45 16 37 H -0.29 -0.38 7.11 99.48 0.71 0.33 16 38 H 0.43 -3.26 8.19 -92.71 -0.76 -4.02 16 39 H 0.09 0.11 8.14 -2.39 -0.02 0.09 16 40 H 0.13 -0.48 7.01 -2.39 -0.02 -0.50 16 Total: 0.00 -23.66 343.60 0.60 -23.06 By element: Atomic # 1 Polarization: -17.31 SS G_CDS: -0.95 Total: -18.26 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: 4.20 Total: 6.04 kcal Atomic # 7 Polarization: 2.01 SS G_CDS: -3.41 Total: -1.39 kcal Atomic # 8 Polarization: -4.73 SS G_CDS: -3.52 Total: -8.25 kcal Atomic # 9 Polarization: -1.43 SS G_CDS: 2.17 Total: 0.74 kcal Atomic # 14 Polarization: -4.03 SS G_CDS: 2.10 Total: -1.94 kcal Total: -23.66 0.60 -23.06 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_13940406.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -160.183 kcal (2) G-P(sol) polarization free energy of solvation -23.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.844 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.063 kcal (6) G-S(sol) free energy of system = (1) + (5) -183.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds