Wall clock time and date at job start Sun Mar 7 2021 11:44:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42899 * 113.99811 * 2 1 4 4 C 1.53010 * 112.84886 * 293.98376 * 3 2 1 5 5 F 1.39893 * 109.47091 * 195.86952 * 4 3 2 6 6 F 1.39896 * 109.47161 * 315.87646 * 4 3 2 7 7 F 1.39901 * 109.46828 * 75.87155 * 4 3 2 8 8 C 1.53774 * 113.69192 * 162.72151 * 3 2 1 9 9 C 1.53781 * 87.07855 * 270.87179 * 8 3 2 10 10 H 1.08999 * 113.69600 * 89.12930 * 9 8 3 11 11 N 1.46507 * 113.61382 * 220.02054 * 9 8 3 12 12 C 1.34775 * 119.99860 * 252.49523 * 11 9 8 13 13 O 1.21561 * 120.00067 * 0.02562 * 12 11 9 14 14 C 1.47842 * 120.00028 * 179.97438 * 12 11 9 15 15 C 1.39562 * 120.14399 * 180.02562 * 14 12 11 16 16 C 1.37975 * 119.85355 * 179.72459 * 15 14 12 17 17 C 1.50696 * 119.93263 * 180.26994 * 16 15 14 18 18 O 1.42897 * 109.47535 * 270.23534 * 17 16 15 19 19 C 1.35897 * 117.00226 * 179.97438 * 18 17 16 20 20 C 1.38709 * 120.05757 * 179.72567 * 19 18 17 21 21 C 1.38172 * 119.94732 * 179.76625 * 20 19 18 22 22 C 1.50700 * 119.97355 * 180.23425 * 21 20 19 23 23 O 1.42899 * 109.46999 * 65.25489 * 22 21 20 24 24 Si 1.86293 * 109.46973 * 185.25700 * 22 21 20 25 25 C 1.38240 * 120.04961 * 0.48966 * 21 20 19 26 26 C 1.38289 * 120.11837 * 359.76388 * 25 21 20 27 27 C 1.38129 * 120.04815 * 0.02562 * 26 25 21 28 28 C 1.38347 * 120.14229 * 0.50741 * 16 15 14 29 29 C 1.38378 * 120.28844 * 359.48857 * 28 16 15 30 30 C 1.37935 * 120.14972 * 0.25527 * 29 28 16 31 31 C 1.53778 * 87.08130 * 334.56463 * 9 8 3 32 32 H 1.09011 * 109.47037 * 184.90446 * 1 2 3 33 33 H 1.08991 * 109.47397 * 304.89989 * 1 2 3 34 34 H 1.08996 * 109.47205 * 64.90768 * 1 2 3 35 35 H 1.09004 * 113.61660 * 156.32019 * 8 3 2 36 36 H 1.09000 * 113.61751 * 25.42057 * 8 3 2 37 37 H 0.96996 * 120.00203 * 72.48958 * 11 9 8 38 38 H 1.08001 * 120.07557 * 359.97438 * 15 14 12 39 39 H 1.09002 * 109.46691 * 30.24037 * 17 16 15 40 40 H 1.09005 * 109.47171 * 150.23405 * 17 16 15 41 41 H 1.08001 * 120.02646 * 0.02562 * 20 19 18 42 42 H 1.09003 * 109.46561 * 305.25175 * 22 21 20 43 43 H 0.96705 * 113.99358 * 179.97438 * 23 22 21 44 44 H 1.48505 * 110.00336 * 178.68043 * 24 22 21 45 45 H 1.48505 * 110.00094 * 300.00085 * 24 22 21 46 46 H 1.08003 * 119.94271 * 179.74809 * 25 21 20 47 47 H 1.07991 * 119.97522 * 179.97438 * 26 25 21 48 48 H 1.08005 * 120.02137 * 179.97438 * 27 26 25 49 49 H 1.07998 * 119.85316 * 179.76855 * 28 16 15 50 50 H 1.08003 * 119.92443 * 180.23318 * 29 28 16 51 51 H 1.07999 * 120.07404 * 180.02562 * 30 29 28 52 52 H 1.09003 * 113.61551 * 139.97823 * 31 9 8 53 53 H 1.09002 * 113.61575 * 270.88907 * 31 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7282 2.0813 -1.2883 5 9 2.6017 3.1704 -1.3774 6 9 1.9174 1.2403 -2.3901 7 9 0.4075 2.5427 -1.2752 8 6 3.4899 1.3231 0.4182 9 6 2.9972 1.4845 1.8660 10 1 2.8248 0.5379 2.3782 11 7 3.7983 2.4218 2.6575 12 6 4.6229 1.9593 3.6180 13 8 4.7023 0.7645 3.8273 14 6 5.4317 2.9050 4.4162 15 6 6.2869 2.4293 5.4112 16 6 7.0432 3.3169 6.1488 17 6 7.9718 2.8048 7.2194 18 8 7.2710 2.7311 8.4626 19 6 7.9697 2.2844 9.5392 20 6 7.3531 2.1930 10.7783 21 6 8.0642 1.7339 11.8705 22 6 7.3934 1.6294 13.2159 23 8 6.3601 0.6441 13.1576 24 14 8.6501 1.1363 14.4996 25 6 9.3921 1.3755 11.7310 26 6 10.0106 1.4707 10.4978 27 6 9.3027 1.9249 9.4021 28 6 6.9473 4.6764 5.9108 29 6 6.1012 5.1545 4.9257 30 6 5.3436 4.2775 4.1777 31 6 1.7204 2.1088 1.2789 32 1 -0.3634 -1.0240 0.0879 33 1 -0.3634 0.5879 0.8428 34 1 -0.3633 0.4358 -0.9306 35 1 4.0389 2.1875 0.0448 36 1 4.0066 0.3810 0.2353 37 1 3.7352 3.3751 2.4901 38 1 6.3597 1.3686 5.6008 39 1 8.3306 1.8127 6.9451 40 1 8.8195 3.4827 7.3199 41 1 6.3168 2.4764 10.8886 42 1 6.9613 2.5940 13.4822 43 1 5.8847 0.5230 13.9910 44 1 8.0079 1.0607 15.8365 45 1 9.2469 -0.1773 14.1479 46 1 9.9474 1.0208 12.5867 47 1 11.0481 1.1904 10.3916 48 1 9.7864 1.9994 8.4393 49 1 7.5386 5.3672 6.4934 50 1 6.0337 6.2167 4.7424 51 1 4.6840 4.6520 3.4088 52 1 0.8086 1.8009 1.7906 53 1 1.7858 3.1881 1.1407 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_4549630.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:44:21 Heat of formation + Delta-G solvation = -198.277015 kcal Electronic energy + Delta-G solvation = -41776.936236 eV Core-core repulsion = 35746.439758 eV Total energy + Delta-G solvation = -6030.496478 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.153 amu Computer time = 1.98 seconds Orbital eigenvalues (eV) -51.28557 -48.81244 -48.75537 -41.85745 -41.36148 -40.76092 -39.60969 -38.81622 -37.44307 -37.39382 -34.75241 -33.27091 -32.60496 -32.17508 -31.05175 -29.11979 -28.14732 -27.73782 -26.83201 -26.60068 -25.58236 -23.65757 -23.58326 -23.11594 -22.09667 -21.52460 -21.21514 -19.81509 -19.56834 -19.27607 -18.99005 -18.79511 -18.58968 -17.57176 -17.36170 -17.31650 -17.12034 -17.04423 -16.72924 -16.55052 -16.12243 -15.94836 -15.84014 -15.81065 -15.64307 -15.58755 -15.52473 -15.36407 -15.18551 -14.93220 -14.91267 -14.81407 -14.61373 -14.55096 -14.48671 -14.06274 -13.89711 -13.75240 -13.63048 -13.46242 -13.34451 -13.24479 -13.12560 -12.77783 -12.71952 -12.57065 -12.54782 -12.14108 -12.03416 -11.93224 -11.78773 -11.68874 -11.21893 -10.99139 -10.55449 -10.37495 -10.02963 -9.98484 -9.92315 -9.26320 -4.92472 -0.27676 0.15730 0.20035 0.39816 1.27721 1.41139 1.60548 1.63416 1.93771 1.95415 2.06437 2.23276 2.51101 2.57717 2.62616 2.80113 2.86361 3.22524 3.36004 3.37539 3.47608 3.53150 3.54719 3.76972 3.80961 3.83630 3.95099 3.99522 4.08986 4.10526 4.17706 4.21255 4.23096 4.25524 4.26266 4.33423 4.35606 4.39529 4.48160 4.51609 4.56177 4.67327 4.67811 4.72834 4.77975 4.80097 4.89723 4.97371 5.17418 5.24324 5.26924 5.30768 5.37253 5.39649 5.45952 5.68554 5.70107 5.78855 6.35965 6.36825 6.55959 7.04038 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.350 6.350 3 C 0.042 3.958 4 C 0.439 3.561 5 F -0.172 7.172 6 F -0.187 7.187 7 F -0.181 7.181 8 C -0.131 4.131 9 C 0.139 3.861 10 H 0.109 0.891 11 N -0.699 5.699 12 C 0.561 3.439 13 O -0.578 6.578 14 C -0.156 4.156 15 C -0.055 4.055 16 C -0.114 4.114 17 C 0.098 3.902 18 O -0.327 6.327 19 C 0.117 3.883 20 C -0.148 4.148 21 C -0.047 4.047 22 C -0.094 4.094 23 O -0.560 6.560 24 Si 0.777 3.223 25 C -0.162 4.162 26 C -0.073 4.073 27 C -0.207 4.207 28 C -0.067 4.067 29 C -0.125 4.125 30 C -0.067 4.067 31 C -0.147 4.147 32 H 0.111 0.889 33 H 0.071 0.929 34 H 0.048 0.952 35 H 0.130 0.870 36 H 0.090 0.910 37 H 0.419 0.581 38 H 0.117 0.883 39 H 0.076 0.924 40 H 0.098 0.902 41 H 0.120 0.880 42 H 0.094 0.906 43 H 0.395 0.605 44 H -0.285 1.285 45 H -0.297 1.297 46 H 0.143 0.857 47 H 0.158 0.842 48 H 0.151 0.849 49 H 0.151 0.849 50 H 0.165 0.835 51 H 0.162 0.838 52 H 0.111 0.889 53 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.193 8.717 1.549 9.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.268 6.268 3 C -0.001 4.001 4 C 0.384 3.616 5 F -0.154 7.154 6 F -0.168 7.168 7 F -0.163 7.163 8 C -0.169 4.169 9 C 0.033 3.967 10 H 0.127 0.873 11 N -0.351 5.351 12 C 0.350 3.650 13 O -0.458 6.458 14 C -0.159 4.159 15 C -0.074 4.074 16 C -0.114 4.114 17 C 0.024 3.976 18 O -0.241 6.241 19 C 0.072 3.928 20 C -0.166 4.166 21 C -0.047 4.047 22 C -0.202 4.202 23 O -0.370 6.370 24 Si 0.682 3.318 25 C -0.180 4.180 26 C -0.091 4.091 27 C -0.226 4.226 28 C -0.085 4.085 29 C -0.143 4.143 30 C -0.085 4.085 31 C -0.185 4.185 32 H 0.129 0.871 33 H 0.090 0.910 34 H 0.066 0.934 35 H 0.148 0.852 36 H 0.108 0.892 37 H 0.259 0.741 38 H 0.135 0.865 39 H 0.094 0.906 40 H 0.116 0.884 41 H 0.138 0.862 42 H 0.112 0.888 43 H 0.245 0.755 44 H -0.212 1.212 45 H -0.224 1.224 46 H 0.161 0.839 47 H 0.176 0.824 48 H 0.169 0.831 49 H 0.169 0.831 50 H 0.183 0.817 51 H 0.179 0.821 52 H 0.129 0.871 53 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 2.548 7.168 1.610 7.776 hybrid contribution -1.627 -0.373 -0.495 1.741 sum 0.921 6.795 1.115 6.947 Atomic orbital electron populations 1.23299 0.78456 1.05410 1.01848 1.88111 1.22334 1.22314 1.94012 1.23612 1.00115 0.86428 0.89961 1.21232 0.74310 0.78619 0.87407 1.93174 1.69301 1.56289 1.96600 1.93196 1.94856 1.71331 1.57424 1.93195 1.36577 1.89656 1.96830 1.23770 0.91342 1.06058 0.95777 1.22134 0.90362 0.94500 0.89681 0.87288 1.45643 1.42623 1.11274 1.35544 1.18572 0.79245 0.87637 0.79545 1.90796 1.67426 1.18108 1.69461 1.19845 1.01477 0.94528 1.00093 1.21172 0.92932 1.00089 0.93232 1.19518 1.00024 0.94381 0.97512 1.21764 0.93802 1.02323 0.79745 1.86123 1.40538 1.80846 1.16628 1.19146 0.91368 0.95176 0.87122 1.20321 1.00589 1.05317 0.90418 1.19268 0.93980 0.97604 0.93890 1.25181 0.97805 0.95546 1.01629 1.86563 1.50159 1.60336 1.39986 0.93974 0.81325 0.83497 0.73008 1.21171 0.94292 1.03465 0.99074 1.21269 1.01075 0.95587 0.91133 1.21584 0.93277 1.06020 1.01712 1.21664 0.96643 0.94054 0.96156 1.21534 0.95779 1.01759 0.95215 1.21711 0.97537 0.90629 0.98617 1.24022 0.99908 1.02222 0.92365 0.87061 0.91029 0.93354 0.85211 0.89160 0.74146 0.86527 0.90600 0.88352 0.86153 0.88827 0.75454 1.21205 1.22447 0.83935 0.82401 0.83147 0.83123 0.81732 0.82086 0.87102 0.85009 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.30 113.37 1.17 1.16 16 2 O -0.35 -0.78 10.34 -148.98 -1.54 -2.32 16 3 C 0.04 -0.04 0.84 -10.27 -0.01 -0.05 16 4 C 0.44 0.51 2.52 71.99 0.18 0.69 16 5 F -0.17 0.02 15.81 44.97 0.71 0.73 16 6 F -0.19 -1.08 17.10 44.97 0.77 -0.31 16 7 F -0.18 -0.23 15.39 44.97 0.69 0.47 16 8 C -0.13 0.23 7.13 31.12 0.22 0.45 16 9 C 0.14 -0.24 4.18 45.52 0.19 -0.05 16 10 H 0.11 0.39 7.46 -2.39 -0.02 0.37 16 11 N -0.70 2.12 5.31 -442.90 -2.35 -0.23 16 12 C 0.56 2.72 7.77 86.79 0.67 3.40 16 13 O -0.58 -8.26 15.95 -3.91 -0.06 -8.33 16 14 C -0.16 -0.30 5.87 -20.09 -0.12 -0.42 16 15 C -0.06 -0.26 9.25 22.53 0.21 -0.06 16 16 C -0.11 -0.12 5.50 -19.90 -0.11 -0.23 16 17 C 0.10 0.03 4.86 71.23 0.35 0.37 16 18 O -0.33 -2.13 10.12 -92.39 -0.93 -3.07 16 19 C 0.12 0.74 6.69 22.50 0.15 0.89 16 20 C -0.15 -1.14 9.63 22.37 0.22 -0.93 16 21 C -0.05 -0.24 5.38 -19.88 -0.11 -0.35 16 22 C -0.09 -0.16 2.79 71.24 0.20 0.04 16 23 O -0.56 -2.88 12.81 -148.98 -1.91 -4.79 16 24 Si 0.78 -0.97 29.85 68.60 2.05 1.08 16 25 C -0.16 -0.34 8.67 22.28 0.19 -0.15 16 26 C -0.07 -0.02 10.04 22.26 0.22 0.21 16 27 C -0.21 -0.36 9.04 22.37 0.20 -0.16 16 28 C -0.07 0.23 9.69 22.33 0.22 0.45 16 29 C -0.13 0.79 10.03 22.23 0.22 1.01 16 30 C -0.07 0.35 9.54 22.52 0.21 0.57 16 31 C -0.15 0.89 6.66 31.12 0.21 1.10 16 32 H 0.11 -0.49 8.14 -2.38 -0.02 -0.51 16 33 H 0.07 -0.41 6.54 -2.39 -0.02 -0.42 16 34 H 0.05 -0.07 6.69 -2.39 -0.02 -0.08 16 35 H 0.13 -0.64 7.02 -2.39 -0.02 -0.65 16 36 H 0.09 0.10 8.14 -2.39 -0.02 0.08 16 37 H 0.42 -4.29 6.76 -92.71 -0.63 -4.92 16 38 H 0.12 0.97 7.65 -2.91 -0.02 0.94 16 39 H 0.08 -0.04 7.60 -2.39 -0.02 -0.05 16 40 H 0.10 -0.47 7.61 -2.38 -0.02 -0.48 16 41 H 0.12 1.04 8.06 -2.91 -0.02 1.01 16 42 H 0.09 -0.19 7.96 -2.39 -0.02 -0.21 16 43 H 0.40 -1.37 8.74 -74.05 -0.65 -2.01 16 44 H -0.28 -0.71 7.11 99.48 0.71 -0.01 16 45 H -0.30 -1.69 7.05 99.48 0.70 -0.99 16 46 H 0.14 -0.24 4.86 -2.91 -0.01 -0.26 16 47 H 0.16 -0.90 8.06 -2.92 -0.02 -0.92 16 48 H 0.15 -0.48 6.30 -2.91 -0.02 -0.50 16 49 H 0.15 -1.15 8.06 -2.91 -0.02 -1.17 16 50 H 0.17 -2.01 8.06 -2.91 -0.02 -2.03 16 51 H 0.16 -2.06 6.41 -2.91 -0.02 -2.08 16 52 H 0.11 -0.82 6.67 -2.39 -0.02 -0.83 16 53 H 0.13 -1.39 8.02 -2.39 -0.02 -1.41 16 Total: 0.00 -27.87 448.02 1.89 -25.98 By element: Atomic # 1 Polarization: -16.91 SS G_CDS: -0.23 Total: -17.14 kcal Atomic # 6 Polarization: 3.23 SS G_CDS: 4.69 Total: 7.92 kcal Atomic # 7 Polarization: 2.12 SS G_CDS: -2.35 Total: -0.23 kcal Atomic # 8 Polarization: -14.05 SS G_CDS: -4.45 Total: -18.50 kcal Atomic # 9 Polarization: -1.28 SS G_CDS: 2.17 Total: 0.89 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: 2.05 Total: 1.08 kcal Total: -27.87 1.89 -25.98 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_4549630.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -172.292 kcal (2) G-P(sol) polarization free energy of solvation -27.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -200.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.985 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.277 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.98 seconds