Wall clock time and date at job start Sun Mar 7 2021 11:44:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.42896 * 113.99913 * 2 1 4 4 C 1.52998 * 112.85147 * 293.98664 * 3 2 1 5 5 F 1.39902 * 109.47415 * 195.87159 * 4 3 2 6 6 F 1.39900 * 109.47103 * 315.86957 * 4 3 2 7 7 F 1.39903 * 109.47303 * 75.87021 * 4 3 2 8 8 C 1.53785 * 113.68987 * 162.71958 * 3 2 1 9 9 C 1.53779 * 87.08262 * 270.87225 * 8 3 2 10 10 H 1.09000 * 113.68985 * 89.12156 * 9 8 3 11 11 N 1.46497 * 113.61535 * 220.01768 * 9 8 3 12 12 C 1.34774 * 120.00279 * 252.49411 * 11 9 8 13 13 O 1.21555 * 119.99564 * 0.02562 * 12 11 9 14 14 C 1.47847 * 120.00292 * 179.72323 * 12 11 9 15 15 C 1.39556 * 120.14387 * 180.27590 * 14 12 11 16 16 C 1.50705 * 120.07338 * 0.02772 * 15 14 12 17 17 O 1.42897 * 109.46937 * 179.97438 * 16 15 14 18 18 C 1.35906 * 117.00075 * 179.97438 * 17 16 15 19 19 C 1.38714 * 120.05685 * 179.72936 * 18 17 16 20 20 C 1.38165 * 119.94241 * 179.77133 * 19 18 17 21 21 C 1.50698 * 119.97105 * 180.23370 * 20 19 18 22 22 O 1.42900 * 109.47507 * 65.25028 * 21 20 19 23 23 Si 1.86299 * 109.46981 * 185.25139 * 21 20 19 24 24 C 1.38243 * 120.05159 * 0.47972 * 20 19 18 25 25 C 1.38284 * 120.11631 * 359.77747 * 24 20 19 26 26 C 1.38119 * 120.05407 * 359.97438 * 25 24 20 27 27 C 1.37977 * 119.85354 * 180.02562 * 15 14 12 28 28 C 1.38343 * 120.14133 * 359.97438 * 27 15 14 29 29 C 1.38383 * 120.29224 * 0.02612 * 28 27 15 30 30 C 1.37932 * 120.14494 * 359.67656 * 29 28 27 31 31 C 1.53783 * 113.61708 * 65.18543 * 3 2 1 32 32 H 1.08992 * 109.47257 * 184.90891 * 1 2 3 33 33 H 1.09007 * 109.46917 * 304.90597 * 1 2 3 34 34 H 1.08994 * 109.46962 * 64.90379 * 1 2 3 35 35 H 1.09000 * 113.61578 * 156.32556 * 8 3 2 36 36 H 1.09004 * 113.61412 * 25.42202 * 8 3 2 37 37 H 0.97000 * 119.99714 * 72.49602 * 11 9 8 38 38 H 1.08994 * 109.46884 * 299.99646 * 16 15 14 39 39 H 1.08998 * 109.47096 * 60.00002 * 16 15 14 40 40 H 1.07995 * 120.02402 * 359.97438 * 19 18 17 41 41 H 1.09002 * 109.46635 * 305.24923 * 21 20 19 42 42 H 0.96703 * 114.00041 * 59.99799 * 22 21 20 43 43 H 1.48503 * 109.99971 * 58.67854 * 23 21 20 44 44 H 1.48503 * 109.99913 * 179.97438 * 23 21 20 45 45 H 1.08001 * 119.94052 * 179.74661 * 24 20 19 46 46 H 1.08005 * 119.96933 * 179.97438 * 25 24 20 47 47 H 1.08003 * 120.02805 * 179.97438 * 26 25 24 48 48 H 1.07990 * 119.93086 * 179.97438 * 27 15 14 49 49 H 1.08005 * 119.85017 * 180.02562 * 28 27 15 50 50 H 1.07996 * 119.92048 * 179.97438 * 29 28 27 51 51 H 1.08005 * 120.07661 * 180.30362 * 30 29 28 52 52 H 1.08995 * 113.61200 * 334.64879 * 31 3 2 53 53 H 1.08998 * 113.69147 * 203.75470 * 31 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7283 2.0813 -1.2881 5 9 2.6019 3.1704 -1.3773 6 9 1.9176 1.2404 -2.3900 7 9 0.4076 2.5428 -1.2751 8 6 3.4900 1.3230 0.4183 9 6 2.9975 1.4844 1.8661 10 1 2.8249 0.5378 2.3781 11 7 3.7985 2.4215 2.6575 12 6 4.6231 1.9590 3.6180 13 8 4.7024 0.7642 3.8273 14 6 5.4362 2.9043 4.4126 15 6 6.2952 2.4282 5.4040 16 6 6.3975 0.9479 5.6676 17 8 7.3357 0.7152 6.7200 18 6 7.5464 -0.5771 7.0842 19 6 8.4482 -0.8758 8.0950 20 6 8.6571 -2.1901 8.4666 21 6 9.6327 -2.5150 9.5682 22 8 9.1530 -1.9787 10.8029 23 14 9.8053 -4.3638 9.7195 24 6 7.9757 -3.2076 7.8251 25 6 7.0802 -2.9127 6.8134 26 6 6.8640 -1.6002 6.4418 27 6 7.0509 3.3157 6.1422 28 6 6.9586 4.6748 5.9011 29 6 6.1086 5.1534 4.9194 30 6 5.3524 4.2764 4.1702 31 6 1.7206 2.1088 1.2789 32 1 -0.3633 -1.0238 0.0879 33 1 -0.3633 0.5881 0.8428 34 1 -0.3633 0.4359 -0.9306 35 1 4.0391 2.1874 0.0450 36 1 4.0067 0.3808 0.2354 37 1 3.7355 3.3749 2.4902 38 1 5.4206 0.5626 5.9595 39 1 6.7330 0.4401 4.7633 40 1 8.9840 -0.0815 8.5933 41 1 10.6033 -2.0773 9.3347 42 1 8.2914 -2.3245 11.0736 43 1 10.2731 -4.9373 8.4321 44 1 10.7653 -4.6973 10.8023 45 1 8.1434 -4.2345 8.1142 46 1 6.5494 -3.7096 6.3136 47 1 6.1648 -1.3704 5.6513 48 1 7.7157 2.9487 6.9100 49 1 7.5525 5.3654 6.4815 50 1 6.0410 6.2156 4.7365 51 1 4.6930 4.6508 3.4010 52 1 0.8088 1.8010 1.7907 53 1 1.7855 3.1882 1.1422 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_4557126.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:44:48 Heat of formation + Delta-G solvation = -196.494630 kcal Electronic energy + Delta-G solvation = -43108.270350 eV Core-core repulsion = 37077.851162 eV Total energy + Delta-G solvation = -6030.419188 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.153 amu Computer time = 2.18 seconds Orbital eigenvalues (eV) -51.27898 -48.80783 -48.75042 -41.96549 -41.38596 -40.78468 -39.44980 -38.90889 -37.40244 -37.25101 -34.70542 -33.30914 -32.49044 -32.12106 -31.01403 -29.10161 -28.13340 -27.84854 -26.81462 -26.66476 -25.26640 -24.01724 -23.58797 -22.95948 -21.88594 -21.70393 -21.24751 -19.78312 -19.56358 -19.29377 -19.13586 -18.91254 -17.91292 -17.44127 -17.39433 -17.20312 -17.14460 -16.94750 -16.55474 -16.43608 -16.20377 -16.04419 -15.89484 -15.81587 -15.63698 -15.59578 -15.53940 -15.35622 -15.18419 -14.92990 -14.91079 -14.87751 -14.64438 -14.54594 -14.43404 -14.20936 -14.07751 -13.72909 -13.68518 -13.34948 -13.29403 -13.13589 -12.95768 -12.78467 -12.70527 -12.56680 -12.47686 -12.21638 -12.19223 -12.02963 -11.76688 -11.68631 -11.06740 -10.90706 -10.48984 -10.35595 -10.00205 -9.97404 -9.82549 -9.28353 -4.98560 -0.27244 0.18049 0.27022 0.37186 1.29695 1.42444 1.65891 1.71545 1.92356 1.97243 2.05690 2.07798 2.52292 2.58532 2.64700 2.73132 2.81780 3.23657 3.37144 3.46237 3.49134 3.57237 3.58238 3.66887 3.81282 3.84645 3.98632 4.04284 4.10030 4.18912 4.22122 4.22864 4.25720 4.27206 4.34643 4.37459 4.40362 4.41309 4.44042 4.51048 4.58135 4.63969 4.68961 4.73847 4.79854 4.82662 4.91172 4.95330 5.18040 5.23837 5.29148 5.34237 5.37336 5.42076 5.45383 5.69807 5.70928 5.82525 6.32045 6.36583 6.75157 7.02882 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.348 6.348 3 C 0.042 3.958 4 C 0.437 3.563 5 F -0.173 7.173 6 F -0.187 7.187 7 F -0.182 7.182 8 C -0.132 4.132 9 C 0.143 3.857 10 H 0.115 0.885 11 N -0.699 5.699 12 C 0.560 3.440 13 O -0.564 6.564 14 C -0.148 4.148 15 C -0.051 4.051 16 C 0.116 3.884 17 O -0.328 6.328 18 C 0.117 3.883 19 C -0.142 4.142 20 C -0.085 4.085 21 C -0.079 4.079 22 O -0.555 6.555 23 Si 0.787 3.213 24 C -0.154 4.154 25 C -0.074 4.074 26 C -0.210 4.210 27 C -0.124 4.124 28 C -0.090 4.090 29 C -0.124 4.124 30 C -0.075 4.075 31 C -0.149 4.149 32 H 0.112 0.888 33 H 0.072 0.928 34 H 0.046 0.954 35 H 0.127 0.873 36 H 0.091 0.909 37 H 0.418 0.582 38 H 0.080 0.920 39 H 0.077 0.923 40 H 0.125 0.875 41 H 0.105 0.895 42 H 0.396 0.604 43 H -0.285 1.285 44 H -0.297 1.297 45 H 0.152 0.848 46 H 0.154 0.846 47 H 0.134 0.866 48 H 0.131 0.869 49 H 0.150 0.850 50 H 0.161 0.839 51 H 0.163 0.837 52 H 0.112 0.888 53 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.170 3.515 0.127 6.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.266 6.266 3 C -0.001 4.001 4 C 0.383 3.617 5 F -0.155 7.155 6 F -0.169 7.169 7 F -0.163 7.163 8 C -0.171 4.171 9 C 0.037 3.963 10 H 0.133 0.867 11 N -0.351 5.351 12 C 0.350 3.650 13 O -0.445 6.445 14 C -0.151 4.151 15 C -0.052 4.052 16 C 0.042 3.958 17 O -0.243 6.243 18 C 0.072 3.928 19 C -0.161 4.161 20 C -0.085 4.085 21 C -0.188 4.188 22 O -0.363 6.363 23 Si 0.692 3.308 24 C -0.171 4.171 25 C -0.092 4.092 26 C -0.229 4.229 27 C -0.142 4.142 28 C -0.108 4.108 29 C -0.141 4.141 30 C -0.094 4.094 31 C -0.187 4.187 32 H 0.130 0.870 33 H 0.090 0.910 34 H 0.065 0.935 35 H 0.145 0.855 36 H 0.109 0.891 37 H 0.257 0.743 38 H 0.097 0.903 39 H 0.095 0.905 40 H 0.143 0.857 41 H 0.123 0.877 42 H 0.246 0.754 43 H -0.212 1.212 44 H -0.225 1.225 45 H 0.169 0.831 46 H 0.171 0.829 47 H 0.152 0.848 48 H 0.149 0.851 49 H 0.167 0.833 50 H 0.179 0.821 51 H 0.180 0.820 52 H 0.130 0.870 53 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -3.875 2.355 0.227 4.540 hybrid contribution -0.108 1.143 -1.060 1.563 sum -3.983 3.498 -0.833 5.367 Atomic orbital electron populations 1.23298 0.78472 1.05432 1.01803 1.88110 1.22298 1.22235 1.93997 1.23616 1.00178 0.86439 0.89858 1.21297 0.74285 0.78636 0.87522 1.93176 1.69326 1.56359 1.96612 1.93196 1.94854 1.71335 1.57482 1.93195 1.36610 1.89667 1.96836 1.23776 0.91262 1.05987 0.96041 1.22132 0.90060 0.94565 0.89516 0.86683 1.45648 1.42674 1.11287 1.35507 1.18455 0.79328 0.87644 0.79618 1.90756 1.67134 1.17503 1.69068 1.19629 1.01104 0.94788 0.99556 1.19710 0.96079 0.93941 0.95483 1.21536 0.91916 0.93499 0.88850 1.85935 1.60951 1.23847 1.53524 1.19156 0.95643 0.83106 0.94944 1.20315 1.00391 0.97250 0.98123 1.20247 0.97982 0.92657 0.97626 1.25324 0.97373 1.12805 0.83282 1.86471 1.41998 1.71046 1.36783 0.93563 0.86942 0.72839 0.77465 1.21167 0.98642 0.99031 0.98303 1.21250 0.96336 0.95955 0.95662 1.21553 1.03913 0.93750 1.03639 1.21109 0.99521 0.93615 0.99959 1.21765 0.97169 0.94948 0.96892 1.21569 0.95699 1.01672 0.95201 1.21602 0.98308 0.90410 0.99030 1.24024 1.00112 1.02143 0.92371 0.86995 0.90964 0.93529 0.85516 0.89068 0.74296 0.90252 0.90519 0.85667 0.87715 0.75438 1.21200 1.22527 0.83089 0.82863 0.84831 0.85138 0.83273 0.82131 0.81967 0.87008 0.85239 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.30 113.37 1.17 1.15 16 2 O -0.35 -0.19 10.34 -148.98 -1.54 -1.73 16 3 C 0.04 -0.11 0.84 -10.27 -0.01 -0.11 16 4 C 0.44 0.15 2.52 71.98 0.18 0.34 16 5 F -0.17 0.11 15.81 44.97 0.71 0.82 16 6 F -0.19 -0.95 17.10 44.97 0.77 -0.18 16 7 F -0.18 -0.10 15.39 44.97 0.69 0.59 16 8 C -0.13 0.45 7.13 31.12 0.22 0.67 16 9 C 0.14 -0.61 4.18 45.52 0.19 -0.42 16 10 H 0.12 -0.01 7.46 -2.39 -0.02 -0.02 16 11 N -0.70 3.76 5.31 -442.91 -2.35 1.41 16 12 C 0.56 0.89 7.75 86.79 0.67 1.56 16 13 O -0.56 -4.58 13.01 -3.89 -0.05 -4.63 16 14 C -0.15 -0.10 5.87 -20.09 -0.12 -0.21 16 15 C -0.05 -0.23 5.91 -19.61 -0.12 -0.35 16 16 C 0.12 0.82 3.38 71.24 0.24 1.06 16 17 O -0.33 -2.93 8.62 -92.49 -0.80 -3.73 16 18 C 0.12 0.98 6.69 22.51 0.15 1.13 16 19 C -0.14 -1.04 9.63 22.37 0.22 -0.83 16 20 C -0.08 -0.31 5.35 -19.88 -0.11 -0.42 16 21 C -0.08 -0.15 2.80 71.24 0.20 0.04 16 22 O -0.55 -1.44 12.84 -148.98 -1.91 -3.35 16 23 Si 0.79 -0.82 29.80 68.60 2.04 1.23 16 24 C -0.15 -0.16 8.67 22.28 0.19 0.03 16 25 C -0.07 -0.15 10.04 22.25 0.22 0.07 16 26 C -0.21 -1.25 9.04 22.36 0.20 -1.04 16 27 C -0.12 -0.34 9.37 22.23 0.21 -0.13 16 28 C -0.09 0.21 10.04 22.33 0.22 0.44 16 29 C -0.12 0.71 10.03 22.23 0.22 0.93 16 30 C -0.08 0.42 9.54 22.52 0.21 0.63 16 31 C -0.15 1.15 6.66 31.12 0.21 1.36 16 32 H 0.11 -0.66 8.14 -2.39 -0.02 -0.68 16 33 H 0.07 -0.53 6.55 -2.38 -0.02 -0.54 16 34 H 0.05 -0.11 6.69 -2.39 -0.02 -0.13 16 35 H 0.13 -0.75 7.02 -2.39 -0.02 -0.77 16 36 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 37 H 0.42 -4.89 6.76 -92.71 -0.63 -5.51 16 38 H 0.08 0.65 6.86 -2.39 -0.02 0.63 16 39 H 0.08 0.66 6.87 -2.39 -0.02 0.65 16 40 H 0.13 0.97 8.06 -2.91 -0.02 0.95 16 41 H 0.11 0.35 7.96 -2.39 -0.02 0.33 16 42 H 0.40 -2.24 8.70 -74.06 -0.64 -2.88 16 43 H -0.29 -1.04 7.11 99.48 0.71 -0.33 16 44 H -0.30 -1.80 7.11 99.48 0.71 -1.09 16 45 H 0.15 -0.66 4.90 -2.91 -0.01 -0.67 16 46 H 0.15 -0.47 8.06 -2.91 -0.02 -0.50 16 47 H 0.13 0.77 6.30 -2.91 -0.02 0.75 16 48 H 0.13 0.51 7.00 -2.92 -0.02 0.49 16 49 H 0.15 -0.97 8.06 -2.91 -0.02 -1.00 16 50 H 0.16 -1.82 8.06 -2.91 -0.02 -1.84 16 51 H 0.16 -2.14 6.41 -2.91 -0.02 -2.16 16 52 H 0.11 -1.03 6.67 -2.39 -0.02 -1.05 16 53 H 0.13 -1.52 8.02 -2.39 -0.02 -1.54 16 Total: 0.00 -22.63 440.85 1.94 -20.70 By element: Atomic # 1 Polarization: -16.79 SS G_CDS: -0.21 Total: -17.00 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: 4.59 Total: 5.89 kcal Atomic # 7 Polarization: 3.76 SS G_CDS: -2.35 Total: 1.41 kcal Atomic # 8 Polarization: -9.15 SS G_CDS: -4.30 Total: -13.45 kcal Atomic # 9 Polarization: -0.94 SS G_CDS: 2.17 Total: 1.23 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: 2.04 Total: 1.23 kcal Total: -22.63 1.94 -20.70 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_4557126.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -175.799 kcal (2) G-P(sol) polarization free energy of solvation -22.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.434 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.695 kcal (6) G-S(sol) free energy of system = (1) + (5) -196.495 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.18 seconds