Wall clock time and date at job start Sun Mar 7 2021 11:45:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42897 * 114.00132 * 2 1 4 4 C 1.53004 * 112.84719 * 66.08176 * 3 2 1 5 5 F 1.39900 * 109.46910 * 283.55860 * 4 3 2 6 6 F 1.39901 * 109.47126 * 43.55519 * 4 3 2 7 7 F 1.39899 * 109.47423 * 163.55350 * 4 3 2 8 8 C 1.53781 * 113.61568 * 294.88923 * 3 2 1 9 9 C 1.53785 * 87.16761 * 270.75355 * 8 3 2 10 10 H 1.08999 * 113.61294 * 89.16011 * 9 8 3 11 11 N 1.46501 * 113.61054 * 220.05675 * 9 8 3 12 12 C 1.34776 * 120.00058 * 205.00008 * 11 9 8 13 13 O 1.21286 * 119.99756 * 0.02562 * 12 11 9 14 14 C 1.50700 * 120.00233 * 180.02562 * 12 11 9 15 15 O 1.42891 * 109.47335 * 180.02562 * 14 12 11 16 16 C 1.35916 * 117.00162 * 179.97438 * 15 14 12 17 17 C 1.38793 * 120.05867 * 179.72012 * 16 15 14 18 18 Br 1.89102 * 120.03706 * 0.02765 * 17 16 15 19 19 C 1.38246 * 119.92427 * 179.76861 * 17 16 15 20 20 C 1.38242 * 120.04735 * 0.48983 * 19 17 16 21 21 C 1.50696 * 119.94238 * 179.76340 * 20 19 17 22 22 O 1.42894 * 109.47553 * 245.02313 * 21 20 19 23 23 Si 1.86303 * 109.47005 * 5.02616 * 21 20 19 24 24 C 1.38283 * 120.11611 * 359.78511 * 20 19 17 25 25 C 1.38146 * 120.07091 * 359.96103 * 24 20 19 26 26 C 1.53777 * 113.69484 * 197.34894 * 3 2 1 27 27 H 1.08998 * 109.47094 * 62.46585 * 1 2 3 28 28 H 1.09005 * 109.47417 * 182.46264 * 1 2 3 29 29 H 1.09001 * 109.46888 * 302.46353 * 1 2 3 30 30 H 1.08993 * 113.61603 * 25.34624 * 8 3 2 31 31 H 1.09002 * 113.61328 * 156.16778 * 8 3 2 32 32 H 0.97002 * 120.00198 * 25.00744 * 11 9 8 33 33 H 1.09004 * 109.47032 * 300.00192 * 14 12 11 34 34 H 1.09000 * 109.47399 * 59.99721 * 14 12 11 35 35 H 1.08002 * 119.96985 * 180.23593 * 19 17 16 36 36 H 1.08998 * 109.46883 * 125.01659 * 21 20 19 37 37 H 0.96701 * 113.99569 * 59.99862 * 22 21 20 38 38 H 1.48497 * 110.00336 * 58.67821 * 23 21 20 39 39 H 1.48494 * 110.00141 * 179.97438 * 23 21 20 40 40 H 1.08000 * 119.96428 * 179.97438 * 24 20 19 41 41 H 1.08001 * 120.01939 * 180.02562 * 25 24 20 42 42 H 1.08998 * 113.62030 * 203.67991 * 26 3 2 43 43 H 1.09005 * 113.60884 * 334.50001 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7297 2.0807 1.2889 5 9 0.4130 2.5532 1.2716 6 9 1.9074 1.2355 2.3895 7 9 2.6121 3.1621 1.3842 8 6 1.7191 2.1094 -1.2782 9 6 2.9956 1.4875 -1.8687 10 1 2.8233 0.5410 -2.3813 11 7 3.7945 2.4270 -2.6595 12 6 4.6179 1.9673 -3.6223 13 8 4.6973 0.7758 -3.8343 14 6 5.4402 2.9337 -4.4353 15 8 6.2257 2.2098 -5.3844 16 6 7.0299 2.9379 -6.2032 17 6 7.8246 2.2989 -7.1447 18 35 7.7893 0.4139 -7.2906 19 6 8.6380 3.0425 -7.9794 20 6 8.6676 4.4203 -7.8697 21 6 9.5591 5.2281 -8.7771 22 8 10.5669 5.8778 -7.9998 23 14 10.3654 4.0995 -10.0209 24 6 7.8808 5.0584 -6.9284 25 6 7.0623 4.3205 -6.0954 26 6 3.4895 1.3233 -0.4199 27 1 -0.3633 0.4751 -0.9113 28 1 -0.3634 -1.0267 0.0442 29 1 -0.3633 0.5516 0.8671 30 1 0.8068 1.8019 -1.7891 31 1 1.7832 3.1886 -1.1392 32 1 3.7308 3.3800 -2.4901 33 1 4.7778 3.6212 -4.9615 34 1 6.0976 3.4977 -3.7737 35 1 9.2539 2.5463 -8.7149 36 1 8.9634 5.9771 -9.2989 37 1 11.1360 5.2707 -7.5073 38 1 9.3274 3.3939 -10.8144 39 1 11.2469 4.8842 -10.9223 40 1 7.9062 6.1348 -6.8445 41 1 6.4479 4.8197 -5.3608 42 1 4.0390 2.1874 -0.0467 43 1 4.0067 0.3814 -0.2367 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:45:11 Heat of formation + Delta-G solvation = -220.507364 kcal Electronic energy + Delta-G solvation = -34457.367309 eV Core-core repulsion = 28910.068648 eV Total energy + Delta-G solvation = -5547.298661 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 440.032 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -51.27754 -48.80485 -48.74614 -41.83226 -41.38401 -40.25064 -39.06252 -37.40575 -37.14709 -34.49866 -33.47533 -32.12316 -30.59155 -29.86479 -28.62182 -28.09974 -26.81156 -26.35876 -24.47262 -23.63169 -22.42866 -21.78742 -21.32989 -19.81145 -19.56326 -19.53102 -19.22920 -18.51333 -18.06052 -17.51549 -17.34976 -17.24131 -16.59735 -16.48126 -16.47737 -15.98417 -15.85019 -15.67086 -15.63172 -15.60821 -15.55006 -15.20568 -15.12856 -14.91788 -14.87902 -14.75945 -14.56982 -14.28935 -14.05672 -13.95097 -13.65676 -13.42536 -13.33633 -13.13415 -12.68116 -12.56526 -12.38948 -12.26852 -12.15913 -11.86961 -11.84441 -11.77166 -11.18758 -11.10324 -10.93525 -10.44737 -10.26773 -9.98158 -9.30417 -5.02724 -0.02002 0.09825 0.65496 1.28834 1.29597 1.40628 1.56102 1.60392 1.93895 2.06801 2.41262 2.44431 2.54294 2.61484 2.83146 3.24327 3.36438 3.48813 3.49724 3.50438 3.58558 3.80731 3.84115 3.99366 4.05193 4.09395 4.10576 4.24637 4.25022 4.35738 4.38572 4.41848 4.46255 4.58851 4.64635 4.70335 4.80161 4.80225 4.81578 5.04692 5.28779 5.31792 5.47560 5.70350 6.06295 6.41119 6.78058 7.10201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.351 6.351 3 C 0.040 3.960 4 C 0.438 3.562 5 F -0.182 7.182 6 F -0.188 7.188 7 F -0.172 7.172 8 C -0.146 4.146 9 C 0.143 3.857 10 H 0.108 0.892 11 N -0.698 5.698 12 C 0.516 3.484 13 O -0.563 6.563 14 C 0.032 3.968 15 O -0.304 6.304 16 C 0.151 3.849 17 C -0.141 4.141 18 Br -0.049 7.049 19 C -0.054 4.054 20 C -0.152 4.152 21 C -0.052 4.052 22 O -0.550 6.550 23 Si 0.742 3.258 24 C -0.034 4.034 25 C -0.194 4.194 26 C -0.132 4.132 27 H 0.071 0.929 28 H 0.109 0.891 29 H 0.049 0.951 30 H 0.109 0.891 31 H 0.133 0.867 32 H 0.425 0.575 33 H 0.131 0.869 34 H 0.133 0.867 35 H 0.147 0.853 36 H 0.118 0.882 37 H 0.396 0.604 38 H -0.289 1.289 39 H -0.293 1.293 40 H 0.155 0.845 41 H 0.174 0.826 42 H 0.131 0.869 43 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.447 6.794 1.410 7.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 O -0.269 6.269 3 C -0.003 4.003 4 C 0.384 3.616 5 F -0.163 7.163 6 F -0.169 7.169 7 F -0.153 7.153 8 C -0.184 4.184 9 C 0.037 3.963 10 H 0.125 0.875 11 N -0.352 5.352 12 C 0.302 3.698 13 O -0.440 6.440 14 C -0.045 4.045 15 O -0.217 6.217 16 C 0.103 3.897 17 C -0.221 4.221 18 Br 0.036 6.964 19 C -0.073 4.073 20 C -0.154 4.154 21 C -0.164 4.164 22 O -0.358 6.358 23 Si 0.649 3.351 24 C -0.053 4.053 25 C -0.213 4.213 26 C -0.170 4.170 27 H 0.090 0.910 28 H 0.128 0.872 29 H 0.068 0.932 30 H 0.128 0.872 31 H 0.151 0.849 32 H 0.264 0.736 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.164 0.836 36 H 0.136 0.864 37 H 0.246 0.754 38 H -0.216 1.216 39 H -0.221 1.221 40 H 0.173 0.827 41 H 0.192 0.808 42 H 0.149 0.851 43 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -1.506 5.182 0.145 5.398 hybrid contribution -0.906 1.085 0.659 1.559 sum -2.412 6.267 0.803 6.763 Atomic orbital electron populations 1.23302 0.78498 1.05234 1.02022 1.88111 1.22299 1.22437 1.94026 1.23645 1.00301 0.86416 0.89984 1.21273 0.74273 0.78617 0.87476 1.93189 1.36982 1.89303 1.96824 1.93198 1.95002 1.71119 1.57580 1.93175 1.68733 1.56850 1.96576 1.24011 0.99933 1.02261 0.92184 1.22085 0.90243 0.94443 0.89537 0.87450 1.45527 1.42810 1.11518 1.35366 1.20531 0.79981 0.88985 0.80274 1.90811 1.66052 1.18748 1.68383 1.22856 0.95744 0.93760 0.92171 1.86239 1.53817 1.35351 1.46253 1.18787 0.90191 0.90896 0.89866 1.21151 1.06095 0.91239 1.03593 1.96780 1.98433 1.03302 1.97886 1.20910 0.96298 0.93410 0.96690 1.20292 1.01686 0.92623 1.00779 1.24817 0.91378 1.01515 0.98679 1.86477 1.46182 1.37758 1.65431 0.94019 0.81469 0.80761 0.78842 1.21219 0.91209 1.01465 0.91359 1.21612 1.04610 0.90576 1.04525 1.23815 0.91217 1.06045 0.95958 0.91030 0.87232 0.93242 0.87248 0.84867 0.73597 0.85118 0.84974 0.83563 0.86435 0.75409 1.21602 1.22096 0.82731 0.80832 0.85056 0.89352 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.02 10.43 113.37 1.18 1.17 16 2 O -0.35 -0.38 10.33 -148.98 -1.54 -1.92 16 3 C 0.04 -0.11 0.85 -10.27 -0.01 -0.11 16 4 C 0.44 -0.04 2.51 71.98 0.18 0.14 16 5 F -0.18 -0.03 15.24 44.97 0.69 0.66 16 6 F -0.19 -0.91 17.09 44.97 0.77 -0.14 16 7 F -0.17 0.26 15.82 44.97 0.71 0.98 16 8 C -0.15 1.22 6.67 31.12 0.21 1.43 16 9 C 0.14 -0.68 4.19 45.58 0.19 -0.49 16 10 H 0.11 0.12 7.47 -2.39 -0.02 0.10 16 11 N -0.70 5.80 5.36 -439.75 -2.36 3.44 16 12 C 0.52 -0.55 7.91 87.66 0.69 0.15 16 13 O -0.56 -6.33 16.10 15.99 0.26 -6.08 16 14 C 0.03 -0.23 5.22 71.24 0.37 0.14 16 15 O -0.30 -0.84 9.00 -73.56 -0.66 -1.50 16 16 C 0.15 0.11 6.68 22.52 0.15 0.26 16 17 C -0.14 -0.48 6.24 22.40 0.14 -0.34 16 18 Br -0.05 -0.35 33.16 -20.37 -0.68 -1.02 16 19 C -0.05 0.01 8.40 22.27 0.19 0.20 16 20 C -0.15 0.43 5.35 -19.85 -0.11 0.33 16 21 C -0.05 0.18 2.80 71.23 0.20 0.38 16 22 O -0.55 1.77 12.83 -148.98 -1.91 -0.14 16 23 Si 0.74 -1.54 29.80 68.60 2.04 0.51 16 24 C -0.03 0.18 9.68 22.26 0.22 0.39 16 25 C -0.19 1.13 9.04 22.36 0.20 1.33 16 26 C -0.13 0.51 7.14 31.18 0.22 0.73 16 27 H 0.07 -0.49 6.75 -2.39 -0.02 -0.50 16 28 H 0.11 -0.55 8.14 -2.38 -0.02 -0.57 16 29 H 0.05 -0.12 6.25 -2.39 -0.01 -0.13 16 30 H 0.11 -1.03 6.73 -2.39 -0.02 -1.04 16 31 H 0.13 -1.74 8.04 -2.39 -0.02 -1.76 16 32 H 0.43 -7.01 8.73 -92.71 -0.81 -7.82 16 33 H 0.13 -1.82 7.66 -2.38 -0.02 -1.84 16 34 H 0.13 -1.85 7.66 -2.39 -0.02 -1.87 16 35 H 0.15 -0.35 4.90 -2.91 -0.01 -0.37 16 36 H 0.12 -0.41 7.96 -2.39 -0.02 -0.43 16 37 H 0.40 -4.16 8.70 -74.06 -0.64 -4.81 16 38 H -0.29 -1.09 7.11 99.48 0.71 -0.38 16 39 H -0.29 -1.50 7.11 99.48 0.71 -0.79 16 40 H 0.16 -1.32 8.06 -2.91 -0.02 -1.35 16 41 H 0.17 -2.36 6.30 -2.91 -0.02 -2.37 16 42 H 0.13 -0.97 7.01 -2.39 -0.02 -0.99 16 43 H 0.09 -0.05 8.14 -2.38 -0.02 -0.06 16 Total: 0.00 -27.55 390.55 1.06 -26.49 By element: Atomic # 1 Polarization: -26.70 SS G_CDS: -0.29 Total: -26.99 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: 4.03 Total: 5.71 kcal Atomic # 7 Polarization: 5.80 SS G_CDS: -2.36 Total: 3.44 kcal Atomic # 8 Polarization: -5.78 SS G_CDS: -3.86 Total: -9.63 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 2.17 Total: 1.49 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: 2.04 Total: 0.51 kcal Atomic # 35 Polarization: -0.35 SS G_CDS: -0.68 Total: -1.02 kcal Total: -27.55 1.06 -26.49 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -194.014 kcal (2) G-P(sol) polarization free energy of solvation -27.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -221.567 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.060 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.493 kcal (6) G-S(sol) free energy of system = (1) + (5) -220.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds