Wall clock time and date at job start Sun Mar 7 2021 11:45:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42893 * 114.00295 * 2 1 4 4 C 1.52998 * 112.84921 * 65.99622 * 3 2 1 5 5 F 1.39902 * 109.47238 * 283.65504 * 4 3 2 6 6 F 1.39897 * 109.47104 * 43.65473 * 4 3 2 7 7 F 1.39901 * 109.47423 * 163.65334 * 4 3 2 8 8 C 1.53781 * 113.61618 * 294.80220 * 3 2 1 9 9 C 1.53785 * 87.08021 * 270.88008 * 8 3 2 10 10 H 1.09000 * 113.61016 * 89.20045 * 9 8 3 11 11 N 1.46506 * 113.61469 * 220.01897 * 9 8 3 12 12 C 1.34770 * 119.99857 * 205.00313 * 11 9 8 13 13 O 1.21710 * 120.00089 * 359.97438 * 12 11 9 14 14 C 1.46585 * 120.00284 * 180.02562 * 12 11 9 15 15 C 1.36642 * 125.46041 * 179.97438 * 14 12 11 16 16 C 1.37481 * 113.29595 * 179.79440 * 15 14 12 17 17 C 1.50694 * 122.45102 * 180.26369 * 16 15 14 18 18 C 1.33816 * 115.09780 * 0.42325 * 16 15 14 19 19 C 1.50706 * 124.52350 * 179.85298 * 18 16 15 20 20 O 1.42894 * 109.46892 * 111.75220 * 19 18 16 21 21 Si 1.86291 * 109.47465 * 231.75490 * 19 18 16 22 22 S 1.70615 * 110.95733 * 359.58781 * 18 16 15 23 23 C 1.53784 * 87.08237 * 334.56542 * 9 8 3 24 24 H 1.09001 * 109.47576 * 62.45927 * 1 2 3 25 25 H 1.09000 * 109.47313 * 182.46115 * 1 2 3 26 26 H 1.09003 * 109.46668 * 302.46272 * 1 2 3 27 27 H 1.09001 * 113.61411 * 156.33496 * 8 3 2 28 28 H 1.08993 * 113.61653 * 25.43128 * 8 3 2 29 29 H 0.96999 * 119.99809 * 24.99848 * 11 9 8 30 30 H 1.07998 * 123.35301 * 0.04040 * 15 14 12 31 31 H 1.08997 * 109.47176 * 264.57116 * 17 16 15 32 32 H 1.09001 * 109.47258 * 24.57165 * 17 16 15 33 33 H 1.09002 * 109.47094 * 144.57439 * 17 16 15 34 34 H 1.09002 * 109.46817 * 351.75559 * 19 18 16 35 35 H 0.96701 * 114.00403 * 60.00724 * 20 19 18 36 36 H 1.48501 * 110.00008 * 58.67578 * 21 19 18 37 37 H 1.48499 * 110.00083 * 179.97438 * 21 19 18 38 38 H 1.08997 * 113.61277 * 139.97852 * 23 9 8 39 39 H 1.08997 * 113.61615 * 270.88355 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7279 2.0814 1.2880 5 9 0.4106 2.5521 1.2697 6 9 1.9063 1.2376 2.3894 7 9 2.6088 3.1642 1.3827 8 6 1.7209 2.1086 -1.2790 9 6 2.9967 1.4825 -1.8667 10 1 2.8227 0.5359 -2.3783 11 7 3.7986 2.4184 -2.6588 12 6 4.6220 1.9545 -3.6195 13 8 4.6999 0.7580 -3.8288 14 6 5.4248 2.8908 -4.4118 15 6 6.2926 2.5442 -5.4087 16 6 6.9124 3.6249 -5.9901 17 6 7.9051 3.4794 -7.1145 18 6 6.5722 4.8153 -5.4822 19 6 7.1234 6.1353 -5.9565 20 8 6.0878 6.8800 -6.6007 21 14 7.7668 7.0997 -4.4983 22 16 5.4257 4.6398 -4.2310 23 6 3.4898 1.3210 -0.4190 24 1 -0.3634 0.4752 -0.9112 25 1 -0.3634 -1.0267 0.0441 26 1 -0.3633 0.5516 0.8671 27 1 1.7877 3.1878 -1.1414 28 1 0.8085 1.8018 -1.7903 29 1 3.7367 3.3719 -2.4918 30 1 6.4708 1.5233 -5.7125 31 1 8.9162 3.4707 -6.7077 32 1 7.7189 2.5455 -7.6450 33 1 7.7981 4.3166 -7.8043 34 1 7.9355 5.9577 -6.6615 35 1 5.3310 7.0750 -6.0312 36 1 8.8222 6.3220 -3.8008 37 1 8.3136 8.4033 -4.9529 38 1 4.0054 0.3782 -0.2360 39 1 4.0401 2.1848 -0.0463 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16772210_6739946.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:45:26 Heat of formation + Delta-G solvation = -194.962214 kcal Electronic energy + Delta-G solvation = -29339.724745 eV Core-core repulsion = 24541.186246 eV Total energy + Delta-G solvation = -4798.538499 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.079 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -51.23176 -48.78102 -48.65476 -41.75379 -40.50746 -39.62544 -37.72982 -37.33837 -34.51161 -32.48052 -29.96365 -29.26391 -28.23446 -26.96644 -26.88859 -24.77158 -23.57004 -21.93708 -21.47571 -20.26848 -19.74133 -19.56622 -19.50914 -19.19561 -17.87773 -17.64111 -17.19372 -17.02306 -16.61890 -16.14253 -16.11143 -15.86081 -15.79449 -15.58621 -15.54302 -15.22707 -15.11122 -14.95135 -14.84011 -14.82009 -14.65975 -14.38004 -14.22003 -13.89435 -13.58151 -13.54119 -13.26351 -13.18730 -13.09153 -12.78714 -12.68409 -12.48611 -12.26528 -12.03777 -11.87101 -11.24361 -11.04038 -10.85118 -10.36936 -9.78068 -9.55042 -5.29133 -0.72258 0.21871 0.61762 0.98906 1.20063 1.40950 1.50899 1.80602 1.88326 1.97170 2.05970 2.46824 2.55333 2.74787 3.19189 3.20048 3.31182 3.42713 3.44095 3.59858 3.83781 4.00789 4.05924 4.08098 4.12079 4.18856 4.27295 4.32773 4.37345 4.39687 4.56701 4.58135 4.64430 4.67051 4.76810 4.88300 5.15644 5.18220 5.28767 5.58910 6.19916 6.28392 6.96551 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.329 6.329 3 C 0.045 3.955 4 C 0.440 3.560 5 F -0.180 7.180 6 F -0.172 7.172 7 F -0.174 7.174 8 C -0.162 4.162 9 C 0.142 3.858 10 H 0.134 0.866 11 N -0.718 5.718 12 C 0.597 3.403 13 O -0.519 6.519 14 C -0.262 4.262 15 C -0.042 4.042 16 C -0.097 4.097 17 C -0.102 4.102 18 C -0.230 4.230 19 C -0.034 4.034 20 O -0.532 6.532 21 Si 0.676 3.324 22 S 0.202 5.798 23 C -0.132 4.132 24 H 0.056 0.944 25 H 0.103 0.897 26 H 0.054 0.946 27 H 0.110 0.890 28 H 0.102 0.898 29 H 0.401 0.599 30 H 0.157 0.843 31 H 0.073 0.927 32 H 0.074 0.926 33 H 0.072 0.928 34 H 0.128 0.872 35 H 0.378 0.622 36 H -0.247 1.247 37 H -0.240 1.240 38 H 0.104 0.896 39 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.873 3.466 0.081 3.940 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.247 6.247 3 C 0.002 3.998 4 C 0.386 3.614 5 F -0.161 7.161 6 F -0.153 7.153 7 F -0.156 7.156 8 C -0.201 4.201 9 C 0.037 3.963 10 H 0.152 0.848 11 N -0.369 5.369 12 C 0.383 3.617 13 O -0.396 6.396 14 C -0.382 4.382 15 C -0.075 4.075 16 C -0.110 4.110 17 C -0.161 4.161 18 C -0.349 4.349 19 C -0.146 4.146 20 O -0.337 6.337 21 Si 0.575 3.425 22 S 0.471 5.529 23 C -0.171 4.171 24 H 0.074 0.926 25 H 0.122 0.878 26 H 0.073 0.927 27 H 0.128 0.872 28 H 0.121 0.879 29 H 0.236 0.764 30 H 0.175 0.825 31 H 0.092 0.908 32 H 0.093 0.907 33 H 0.091 0.909 34 H 0.145 0.855 35 H 0.225 0.775 36 H -0.171 1.171 37 H -0.163 1.163 38 H 0.122 0.878 39 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -1.386 3.811 0.798 4.133 hybrid contribution 0.465 -0.622 -0.923 1.207 sum -0.921 3.189 -0.126 3.322 Atomic orbital electron populations 1.23172 0.79314 1.04585 1.01509 1.88133 1.21253 1.21365 1.93947 1.23532 0.99860 0.86573 0.89866 1.21031 0.74346 0.78632 0.87430 1.93195 1.36761 1.89349 1.96829 1.93230 1.94903 1.70635 1.56540 1.93180 1.68944 1.56893 1.96576 1.24021 1.00512 1.01359 0.94177 1.22291 0.89266 0.94826 0.89938 0.84846 1.45754 1.44052 1.10272 1.36829 1.16938 0.78627 0.87268 0.78839 1.90883 1.65641 1.15120 1.67907 1.24450 1.09401 0.96881 1.07478 1.20718 0.93076 1.00791 0.92961 1.18707 1.01161 0.90990 1.00123 1.20626 0.96840 1.03497 0.95152 1.24461 1.06111 1.00579 1.03791 1.24647 0.94322 0.89576 1.06096 1.86578 1.31351 1.74002 1.41784 0.95156 0.87363 0.80585 0.79423 1.82613 1.38446 1.00282 1.31566 1.23745 0.91416 1.06167 0.95772 0.92575 0.87849 0.92736 0.87216 0.87947 0.76375 0.82530 0.90814 0.90715 0.90888 0.85484 0.77496 1.17114 1.16323 0.87761 0.86548 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.43 101.05 1.05 1.04 16 2 O -0.33 -0.09 10.33 -35.23 -0.36 -0.45 16 3 C 0.05 -0.04 0.85 -89.80 -0.08 -0.12 16 4 C 0.44 0.12 2.51 37.16 0.09 0.21 16 5 F -0.18 -0.08 15.23 2.25 0.03 -0.04 16 6 F -0.17 -0.38 17.10 2.25 0.04 -0.34 16 7 F -0.17 0.00 15.82 2.25 0.04 0.04 16 8 C -0.16 0.49 6.68 -25.92 -0.17 0.32 16 9 C 0.14 -0.21 4.17 -67.11 -0.28 -0.49 16 10 H 0.13 0.02 7.46 -51.93 -0.39 -0.37 16 11 N -0.72 1.14 5.35 -54.34 -0.29 0.85 16 12 C 0.60 0.88 7.78 -12.90 -0.10 0.78 16 13 O -0.52 -2.69 16.44 5.18 0.09 -2.61 16 14 C -0.26 -0.10 6.45 -36.79 -0.24 -0.34 16 15 C -0.04 -0.04 9.78 -40.43 -0.40 -0.43 16 16 C -0.10 -0.01 5.78 -106.45 -0.62 -0.63 16 17 C -0.10 0.12 9.45 36.00 0.34 0.46 16 18 C -0.23 0.18 4.85 -35.86 -0.17 0.01 16 19 C -0.03 0.04 2.75 36.01 0.10 0.14 16 20 O -0.53 0.46 12.88 -35.23 -0.45 0.01 16 21 Si 0.68 -1.28 32.08 -169.99 -5.45 -6.73 16 22 S 0.20 -0.51 20.77 -107.50 -2.23 -2.74 16 23 C -0.13 0.20 7.13 -25.91 -0.18 0.01 16 24 H 0.06 -0.17 6.76 -51.93 -0.35 -0.52 16 25 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 26 H 0.05 -0.07 6.24 -51.93 -0.32 -0.40 16 27 H 0.11 -0.49 8.04 -51.93 -0.42 -0.91 16 28 H 0.10 -0.37 6.74 -51.93 -0.35 -0.72 16 29 H 0.40 -1.62 7.84 -40.82 -0.32 -1.94 16 30 H 0.16 0.11 8.06 -52.49 -0.42 -0.31 16 31 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.07 -0.12 8.10 -51.93 -0.42 -0.54 16 33 H 0.07 -0.09 7.05 -51.93 -0.37 -0.46 16 34 H 0.13 -0.15 6.30 -51.93 -0.33 -0.48 16 35 H 0.38 -1.77 8.70 45.56 0.40 -1.38 16 36 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 37 H -0.24 -0.20 7.11 56.52 0.40 0.20 16 38 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.12 -0.30 7.02 -51.93 -0.36 -0.66 16 LS Contribution 351.57 15.07 5.30 5.30 Total: 0.00 -7.74 351.57 -8.07 -15.81 By element: Atomic # 1 Polarization: -5.93 SS G_CDS: -4.12 Total: -10.05 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -0.65 Total: 0.96 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: -0.29 Total: 0.85 kcal Atomic # 8 Polarization: -2.32 SS G_CDS: -0.73 Total: -3.05 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.11 Total: -0.35 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.45 Total: -6.73 kcal Atomic # 16 Polarization: -0.51 SS G_CDS: -2.23 Total: -2.74 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -7.74 -8.07 -15.81 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_6739946.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -179.148 kcal (2) G-P(sol) polarization free energy of solvation -7.741 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -186.890 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.073 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -194.962 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds