Wall clock time and date at job start Sun Mar 7 2021 11:45:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42901 * 113.99382 * 2 1 4 4 C 1.53001 * 112.85082 * 289.99726 * 3 2 1 5 5 F 1.39891 * 109.47226 * 63.23459 * 4 3 2 6 6 F 1.39904 * 109.47011 * 183.23903 * 4 3 2 7 7 F 1.39908 * 109.47050 * 303.23385 * 4 3 2 8 8 C 1.53780 * 113.61207 * 158.69403 * 3 2 1 9 9 C 1.53786 * 87.08100 * 270.88153 * 8 3 2 10 10 H 1.09000 * 113.61489 * 89.11601 * 9 8 3 11 11 N 1.46498 * 113.68630 * 220.00645 * 9 8 3 12 12 C 1.34775 * 119.99835 * 252.53007 * 11 9 8 13 13 O 1.21552 * 120.00262 * 0.02562 * 12 11 9 14 14 C 1.47852 * 119.99752 * 180.02562 * 12 11 9 15 15 C 1.39549 * 120.14407 * 356.96743 * 14 12 11 16 16 C 1.37986 * 119.85161 * 179.72116 * 15 14 12 17 17 C 1.50694 * 119.92758 * 180.29788 * 16 15 14 18 18 O 1.42901 * 109.47178 * 105.28629 * 17 16 15 19 19 Si 1.86299 * 109.47391 * 345.28206 * 17 16 15 20 20 C 1.38340 * 120.14192 * 0.58327 * 16 15 14 21 21 C 1.50699 * 119.85227 * 179.71936 * 20 16 15 22 22 C 1.38379 * 120.29188 * 359.69410 * 20 16 15 23 23 C 1.37940 * 120.14682 * 0.02562 * 22 20 16 24 24 C 1.50698 * 120.07272 * 180.02562 * 23 22 20 25 25 C 1.53776 * 113.61563 * 61.19693 * 3 2 1 26 26 H 1.08995 * 109.47526 * 66.92650 * 1 2 3 27 27 H 1.08998 * 109.47233 * 306.92356 * 1 2 3 28 28 H 1.09000 * 109.46697 * 186.93151 * 1 2 3 29 29 H 1.09001 * 113.61426 * 25.42977 * 8 3 2 30 30 H 1.08997 * 113.61821 * 156.33292 * 8 3 2 31 31 H 0.97000 * 119.99929 * 72.53655 * 11 9 8 32 32 H 1.07994 * 120.07798 * 0.02874 * 15 14 12 33 33 H 1.09009 * 109.47182 * 225.27952 * 17 16 15 34 34 H 0.96703 * 113.99714 * 299.99369 * 18 17 16 35 35 H 1.48498 * 109.99790 * 58.67866 * 19 17 16 36 36 H 1.48501 * 110.00223 * 180.02562 * 19 17 16 37 37 H 1.09001 * 109.46790 * 269.97715 * 21 20 16 38 38 H 1.09002 * 109.47279 * 29.97227 * 21 20 16 39 39 H 1.09001 * 109.47171 * 149.98001 * 21 20 16 40 40 H 1.08005 * 119.92555 * 180.02562 * 22 20 16 41 41 H 1.09008 * 109.47086 * 262.87989 * 24 23 22 42 42 H 1.08999 * 109.47176 * 22.88167 * 24 23 22 43 43 H 1.09002 * 109.47048 * 142.88008 * 24 23 22 44 44 H 1.09000 * 113.61390 * 203.66165 * 25 3 2 45 45 H 1.08997 * 113.61907 * 334.55974 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 1.8112 2.0444 -1.3249 5 9 0.4450 2.2516 -1.5428 6 9 2.4679 3.2787 -1.2737 7 9 2.3392 1.2784 -2.3699 8 6 3.4599 1.3344 0.5120 9 6 2.8756 1.5365 1.9201 10 1 2.6689 0.6039 2.4450 11 7 3.6250 2.4948 2.7363 12 6 4.3848 2.0584 3.7604 13 8 4.4487 0.8697 4.0064 14 6 5.1407 3.0256 4.5845 15 6 5.1201 4.3841 4.2663 16 6 5.8231 5.2822 5.0430 17 6 5.7966 6.7505 4.7048 18 8 4.9592 7.4387 5.6360 19 14 5.1274 6.9789 2.9812 20 6 6.5569 4.8369 6.1279 21 6 7.3273 5.8227 6.9679 22 6 6.5861 3.4904 6.4454 23 6 5.8832 2.5828 5.6806 24 6 5.9157 1.1169 6.0282 25 6 1.6404 2.1444 1.2347 26 1 -0.3634 0.4027 -0.9454 27 1 -0.3633 0.6174 0.8215 28 1 -0.3633 -1.0202 0.1240 29 1 3.9853 0.3874 0.3891 30 1 4.0337 2.1879 0.1508 31 1 3.5742 3.4433 2.5398 32 1 4.5513 4.7325 3.4170 33 1 6.8078 7.1540 4.7585 34 1 4.0425 7.1309 5.6427 35 1 3.7614 6.4043 2.8865 36 1 5.0968 8.4228 2.6354 37 1 8.3337 5.9353 6.5645 38 1 6.8200 6.7873 6.9531 39 1 7.3857 5.4585 7.9936 40 1 7.1607 3.1492 7.2940 41 1 6.6614 0.6139 5.4125 42 1 6.1738 0.9987 7.0806 43 1 4.9354 0.6777 5.8430 44 1 1.7167 3.2193 1.0710 45 1 0.6970 1.8513 1.6952 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_9599494.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:45:36 Heat of formation + Delta-G solvation = -194.856928 kcal Electronic energy + Delta-G solvation = -33685.269073 eV Core-core repulsion = 28642.045274 eV Total energy + Delta-G solvation = -5043.223799 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.26127 -48.80235 -48.72827 -41.94031 -41.12368 -39.81756 -37.81115 -37.30898 -34.83127 -34.38047 -33.05086 -29.65912 -28.98528 -28.35819 -28.04795 -26.76246 -25.65469 -24.35486 -23.60219 -22.29408 -21.53781 -20.86597 -19.73358 -19.55289 -19.31102 -19.03398 -17.62500 -17.51924 -17.16928 -16.69282 -16.53607 -16.35278 -16.12966 -16.00284 -15.92443 -15.69158 -15.57122 -15.48084 -15.15814 -15.00051 -14.92281 -14.86634 -14.69065 -14.55249 -14.47690 -14.06710 -13.92535 -13.70868 -13.46868 -13.24411 -13.09911 -13.05728 -12.81709 -12.70939 -12.65582 -12.53387 -12.49897 -11.95069 -11.77635 -11.73919 -10.99860 -10.69809 -10.56732 -10.27321 -9.89156 -9.60578 -4.92695 -0.25039 0.18310 1.29238 1.44256 1.52998 1.69613 1.95877 2.00141 2.09771 2.53225 2.59217 2.65720 2.83111 3.24976 3.38214 3.42609 3.48443 3.50008 3.61548 3.70079 3.83279 3.98327 4.16560 4.20241 4.24762 4.30476 4.38327 4.42818 4.52171 4.56268 4.58636 4.59034 4.69720 4.72453 4.78817 4.81009 4.82072 4.84452 4.93246 5.05799 5.16058 5.26507 5.38064 5.50847 5.52725 5.71154 5.82063 6.38008 6.50221 7.09362 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.001 3.999 2 O -0.349 6.349 3 C 0.043 3.957 4 C 0.439 3.561 5 F -0.184 7.184 6 F -0.172 7.172 7 F -0.186 7.186 8 C -0.130 4.130 9 C 0.142 3.858 10 H 0.116 0.884 11 N -0.706 5.706 12 C 0.562 3.438 13 O -0.556 6.556 14 C -0.159 4.159 15 C -0.072 4.072 16 C -0.134 4.134 17 C -0.078 4.078 18 O -0.543 6.543 19 Si 0.749 3.251 20 C -0.027 4.027 21 C -0.127 4.127 22 C -0.138 4.138 23 C -0.022 4.022 24 C -0.121 4.121 25 C -0.155 4.155 26 H 0.052 0.948 27 H 0.071 0.929 28 H 0.110 0.890 29 H 0.094 0.906 30 H 0.128 0.872 31 H 0.413 0.587 32 H 0.147 0.853 33 H 0.125 0.875 34 H 0.386 0.614 35 H -0.259 1.259 36 H -0.303 1.303 37 H 0.087 0.913 38 H 0.077 0.923 39 H 0.074 0.926 40 H 0.144 0.856 41 H 0.071 0.929 42 H 0.071 0.929 43 H 0.081 0.919 44 H 0.127 0.873 45 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.134 2.614 0.951 2.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 O -0.267 6.267 3 C 0.000 4.000 4 C 0.384 3.616 5 F -0.165 7.165 6 F -0.154 7.154 7 F -0.167 7.167 8 C -0.168 4.168 9 C 0.037 3.963 10 H 0.134 0.866 11 N -0.358 5.358 12 C 0.352 3.648 13 O -0.436 6.436 14 C -0.162 4.162 15 C -0.090 4.090 16 C -0.135 4.135 17 C -0.187 4.187 18 O -0.351 6.351 19 Si 0.653 3.347 20 C -0.028 4.028 21 C -0.184 4.184 22 C -0.156 4.156 23 C -0.023 4.023 24 C -0.177 4.177 25 C -0.192 4.192 26 H 0.071 0.929 27 H 0.089 0.911 28 H 0.128 0.872 29 H 0.113 0.887 30 H 0.146 0.854 31 H 0.251 0.749 32 H 0.164 0.836 33 H 0.143 0.857 34 H 0.235 0.765 35 H -0.185 1.185 36 H -0.230 1.230 37 H 0.106 0.894 38 H 0.096 0.904 39 H 0.093 0.907 40 H 0.162 0.838 41 H 0.090 0.910 42 H 0.090 0.910 43 H 0.099 0.901 44 H 0.145 0.855 45 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 0.185 2.269 0.722 2.389 hybrid contribution -1.142 0.622 0.273 1.329 sum -0.958 2.891 0.995 3.204 Atomic orbital electron populations 1.23374 0.78522 1.05328 1.02145 1.88110 1.22332 1.22234 1.93977 1.23577 1.00766 0.86668 0.89031 1.21319 0.73801 0.78200 0.88279 1.93165 1.32472 1.95084 1.95811 1.93182 1.81009 1.44613 1.96571 1.93200 1.86406 1.75537 1.61573 1.23748 0.91797 1.06088 0.95169 1.22132 0.90731 0.94032 0.89418 0.86635 1.45743 1.47614 1.11144 1.31338 1.18442 0.78623 0.87825 0.79949 1.90748 1.64997 1.18097 1.69717 1.19611 1.03828 0.93532 0.99225 1.21307 0.97494 0.91465 0.98722 1.20078 1.00243 0.96127 0.97015 1.25137 1.00469 0.88816 1.04299 1.86586 1.25165 1.62550 1.60792 0.94259 0.82852 0.79919 0.77675 1.20223 0.94226 0.94342 0.93989 1.21013 1.00091 0.98176 0.99089 1.21200 1.00909 0.92201 1.01266 1.20212 0.92647 0.97025 0.92439 1.21066 1.04206 0.90960 1.01512 1.24072 1.00686 1.01867 0.92614 0.92914 0.91095 0.87171 0.88734 0.85398 0.74915 0.83600 0.85745 0.76472 1.18501 1.23050 0.89429 0.90398 0.90661 0.83833 0.91019 0.91003 0.90096 0.85466 0.87030 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 10.32 113.37 1.17 1.17 16 2 O -0.35 -0.43 10.52 -148.98 -1.57 -1.99 16 3 C 0.04 -0.07 0.79 -10.27 -0.01 -0.08 16 4 C 0.44 0.40 2.70 71.98 0.19 0.60 16 5 F -0.18 -0.32 14.90 44.97 0.67 0.35 16 6 F -0.17 0.11 15.71 44.97 0.71 0.82 16 7 F -0.19 -0.96 17.29 44.97 0.78 -0.18 16 8 C -0.13 0.38 7.16 31.12 0.22 0.60 16 9 C 0.14 -0.43 4.17 45.52 0.19 -0.24 16 10 H 0.12 0.12 7.46 -2.39 -0.02 0.10 16 11 N -0.71 2.48 5.31 -442.90 -2.35 0.13 16 12 C 0.56 1.53 7.73 86.79 0.67 2.20 16 13 O -0.56 -5.22 12.88 -3.88 -0.05 -5.27 16 14 C -0.16 -0.18 5.87 -20.09 -0.12 -0.30 16 15 C -0.07 0.24 8.14 22.53 0.18 0.42 16 16 C -0.13 0.36 5.26 -19.90 -0.10 0.26 16 17 C -0.08 0.32 1.88 71.23 0.13 0.45 16 18 O -0.54 0.75 11.92 -148.98 -1.78 -1.02 16 19 Si 0.75 -4.36 30.23 68.60 2.07 -2.29 16 20 C -0.03 0.03 5.89 -19.81 -0.12 -0.08 16 21 C -0.13 0.44 9.31 71.24 0.66 1.11 16 22 C -0.14 0.01 9.31 22.23 0.21 0.22 16 23 C -0.02 -0.05 5.91 -19.61 -0.12 -0.17 16 24 C -0.12 -0.40 8.77 71.24 0.62 0.22 16 25 C -0.15 0.98 6.79 31.12 0.21 1.19 16 26 H 0.05 -0.10 6.27 -2.39 -0.01 -0.12 16 27 H 0.07 -0.46 6.27 -2.39 -0.01 -0.47 16 28 H 0.11 -0.57 8.14 -2.39 -0.02 -0.59 16 29 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 30 H 0.13 -0.77 7.38 -2.39 -0.02 -0.79 16 31 H 0.41 -3.61 6.77 -92.71 -0.63 -4.24 16 32 H 0.15 -1.21 3.21 -2.91 -0.01 -1.21 16 33 H 0.12 -0.66 7.38 -2.38 -0.02 -0.67 16 34 H 0.39 -2.62 8.70 -74.06 -0.64 -3.27 16 35 H -0.26 1.47 6.69 99.48 0.67 2.13 16 36 H -0.30 -0.84 7.11 99.48 0.71 -0.13 16 37 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 38 H 0.08 -0.14 6.18 -2.39 -0.01 -0.15 16 39 H 0.07 -0.32 8.08 -2.39 -0.02 -0.34 16 40 H 0.14 -0.44 8.05 -2.91 -0.02 -0.46 16 41 H 0.07 0.30 8.14 -2.38 -0.02 0.28 16 42 H 0.07 0.01 8.04 -2.39 -0.02 -0.01 16 43 H 0.08 0.58 5.79 -2.39 -0.01 0.57 16 44 H 0.13 -1.24 7.58 -2.39 -0.02 -1.26 16 45 H 0.11 -0.89 6.41 -2.39 -0.02 -0.90 16 Total: 0.00 -16.32 368.69 2.30 -14.02 By element: Atomic # 1 Polarization: -11.92 SS G_CDS: -0.19 Total: -12.12 kcal Atomic # 6 Polarization: 3.55 SS G_CDS: 4.01 Total: 7.56 kcal Atomic # 7 Polarization: 2.48 SS G_CDS: -2.35 Total: 0.13 kcal Atomic # 8 Polarization: -4.89 SS G_CDS: -3.39 Total: -8.28 kcal Atomic # 9 Polarization: -1.18 SS G_CDS: 2.15 Total: 0.98 kcal Atomic # 14 Polarization: -4.36 SS G_CDS: 2.07 Total: -2.29 kcal Total: -16.32 2.30 -14.02 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_9599494.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -180.838 kcal (2) G-P(sol) polarization free energy of solvation -16.318 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -197.156 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.299 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.019 kcal (6) G-S(sol) free energy of system = (1) + (5) -194.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds