Wall clock time and date at job start Sun Mar 7 2021 13:30:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35540 * 125.67458 * 2 1 4 4 C 1.35454 * 108.87148 * 179.97438 * 3 2 1 5 5 C 1.50692 * 126.06946 * 180.02562 * 4 3 2 6 6 O 1.42907 * 109.47335 * 120.02214 * 5 4 3 7 7 Si 1.86308 * 109.47204 * 0.02562 * 5 4 3 8 8 H 1.48502 * 109.46878 * 59.99716 * 7 5 4 9 9 H 1.48497 * 109.47124 * 180.02562 * 7 5 4 10 10 H 1.48495 * 109.46887 * 300.00230 * 7 5 4 11 11 C 1.39838 * 107.86478 * 0.02562 * 4 3 2 12 12 C 1.37647 * 125.68212 * 179.69807 * 2 1 3 13 13 C 1.46683 * 126.22945 * 0.02562 * 12 2 1 14 14 O 1.21693 * 120.00242 * 5.56297 * 13 12 2 15 15 N 1.34774 * 119.99528 * 185.56622 * 13 12 2 16 16 C 1.46504 * 119.99448 * 185.06962 * 15 13 12 17 17 C 1.52524 * 109.04291 * 277.14528 * 16 15 13 18 18 C 1.53716 * 109.64030 * 162.45038 * 17 16 15 19 19 Si 1.87387 * 107.28096 * 59.12827 * 18 17 16 20 20 C 1.86305 * 109.94416 * 195.09359 * 19 18 17 21 21 C 1.86297 * 109.94639 * 73.84509 * 19 18 17 22 22 C 1.87372 * 107.00702 * 314.46748 * 19 18 17 23 23 C 1.52531 * 109.04190 * 154.99960 * 16 15 13 24 24 H 1.09003 * 109.47392 * 86.10561 * 1 2 3 25 25 H 1.09004 * 109.47369 * 326.10489 * 1 2 3 26 26 H 1.09002 * 109.46584 * 206.10454 * 1 2 3 27 27 H 1.07994 * 125.56357 * 359.97438 * 3 2 1 28 28 H 1.08995 * 109.47711 * 240.02428 * 5 4 3 29 29 H 0.96693 * 114.00072 * 180.02562 * 6 5 4 30 30 H 1.08003 * 126.45897 * 180.02562 * 11 4 3 31 31 H 0.96998 * 120.00473 * 5.06684 * 15 13 12 32 32 H 1.09001 * 109.03593 * 36.04027 * 16 15 13 33 33 H 1.08992 * 109.44376 * 282.50505 * 17 16 15 34 34 H 1.09000 * 109.44175 * 42.40151 * 17 16 15 35 35 H 1.09001 * 109.89409 * 299.68445 * 18 17 16 36 36 H 1.08997 * 109.89262 * 178.57312 * 18 17 16 37 37 H 1.08994 * 109.46954 * 177.56161 * 20 19 18 38 38 H 1.09001 * 109.46993 * 297.56626 * 20 19 18 39 39 H 1.09002 * 109.46809 * 57.56233 * 20 19 18 40 40 H 1.09004 * 109.47058 * 302.43547 * 21 19 18 41 41 H 1.09000 * 109.47192 * 62.43229 * 21 19 18 42 42 H 1.09000 * 109.47194 * 182.43748 * 21 19 18 43 43 H 1.09004 * 109.89676 * 286.08657 * 22 19 18 44 44 H 1.09003 * 109.95446 * 165.00862 * 22 19 18 45 45 H 1.09005 * 109.43908 * 317.59865 * 23 16 15 46 46 H 1.08994 * 109.44455 * 77.49808 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5522 0.7095 0.0006 5 6 4.7536 1.6190 0.0013 6 8 5.5398 1.3689 1.1682 7 14 4.1886 3.3944 0.0021 8 1 3.3710 3.6530 1.2146 9 1 5.3725 4.2907 0.0022 10 1 3.3716 3.6543 -1.2104 11 6 3.5781 -0.6887 0.0004 12 6 2.2679 -1.1180 0.0059 13 6 1.8125 -2.5124 0.0127 14 8 0.6265 -2.7656 -0.0886 15 7 2.7075 -3.5130 0.1313 16 6 2.2667 -4.9062 0.0267 17 6 1.7226 -5.3587 1.3779 18 6 0.8701 -6.6245 1.1938 19 14 1.9747 -7.9342 0.4351 20 6 0.9378 -9.3279 -0.2382 21 6 3.1617 -8.5841 1.7155 22 6 2.9226 -7.1126 -0.9567 23 6 3.4421 -5.7676 -0.4238 24 1 -0.3634 0.0698 -1.0253 25 1 -0.3634 0.8530 0.5731 26 1 -0.3632 -0.9229 0.4522 27 1 1.9081 2.1236 -0.0004 28 1 5.3537 1.4292 -0.8885 29 1 6.3311 1.9205 1.2350 30 1 4.4585 -1.3143 0.0011 31 1 3.6435 -3.3107 0.2858 32 1 1.4718 -4.9728 -0.7160 33 1 2.5533 -5.5752 2.0494 34 1 1.1081 -4.5664 1.8053 35 1 0.0329 -6.4143 0.5282 36 1 0.4998 -6.9660 2.1604 37 1 1.5845 -10.0640 -0.7157 38 1 0.3901 -9.8001 0.5774 39 1 0.2322 -8.9350 -0.9702 40 1 3.7486 -7.7589 2.1190 41 1 2.6025 -9.0601 2.5210 42 1 3.8286 -9.3135 1.2557 43 1 2.2616 -6.9442 -1.8070 44 1 3.7609 -7.7410 -1.2576 45 1 3.9888 -5.2513 -1.2130 46 1 4.1071 -5.9447 0.4214 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16807780_10803934.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:30:44 Heat of formation + Delta-G solvation = -70.110444 kcal Electronic energy + Delta-G solvation = -24021.051945 eV Core-core repulsion = 20648.412805 eV Total energy + Delta-G solvation = -3372.639140 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 310.163 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.45860 -40.39508 -37.84529 -37.51058 -34.42439 -33.55460 -32.06307 -30.84545 -29.27472 -28.46539 -28.35645 -26.69745 -25.52544 -23.57378 -23.37155 -21.53381 -20.90427 -20.26428 -18.59890 -18.28236 -17.14473 -17.02950 -16.59077 -16.12032 -15.86782 -15.42816 -15.21781 -14.96053 -14.88574 -14.60858 -14.28937 -14.05074 -13.99102 -13.81661 -13.57331 -13.41657 -13.35535 -13.27683 -13.22950 -13.15529 -13.11491 -12.90328 -12.52919 -12.42592 -12.16535 -12.11758 -11.83220 -11.77496 -10.93939 -10.82105 -10.49680 -10.28696 -10.24093 -9.97328 -9.57923 -9.15866 0.53891 1.20148 1.42736 1.49422 1.62505 1.67761 1.72453 1.84679 1.88239 1.95210 2.39880 2.47211 2.59939 3.55727 3.70722 3.84152 3.92355 3.96667 4.06282 4.16451 4.19968 4.31542 4.35994 4.43954 4.49025 4.61150 4.64248 4.69719 4.71374 4.74925 4.75094 4.75707 4.78387 4.85555 4.87766 5.08839 5.20056 5.25957 5.31584 5.33439 5.42892 5.49036 5.54168 5.60146 5.75285 5.98732 6.18300 6.57049 6.69824 7.28144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.404 5.404 3 C 0.019 3.981 4 C -0.163 4.163 5 C -0.043 4.043 6 O -0.546 6.546 7 Si 0.939 3.061 8 H -0.249 1.249 9 H -0.255 1.255 10 H -0.251 1.251 11 C -0.109 4.109 12 C -0.054 4.054 13 C 0.592 3.408 14 O -0.546 6.546 15 N -0.716 5.716 16 C 0.141 3.859 17 C -0.117 4.117 18 C -0.402 4.402 19 Si 0.990 3.010 20 C -0.447 4.447 21 C -0.445 4.445 22 C -0.402 4.402 23 C -0.117 4.117 24 H 0.079 0.921 25 H 0.083 0.917 26 H 0.107 0.893 27 H 0.168 0.832 28 H 0.072 0.928 29 H 0.377 0.623 30 H 0.146 0.854 31 H 0.403 0.597 32 H 0.090 0.910 33 H 0.065 0.935 34 H 0.068 0.932 35 H 0.077 0.923 36 H 0.076 0.924 37 H 0.068 0.932 38 H 0.069 0.931 39 H 0.069 0.931 40 H 0.069 0.931 41 H 0.069 0.931 42 H 0.068 0.932 43 H 0.078 0.922 44 H 0.080 0.920 45 H 0.071 0.929 46 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.629 0.297 -0.702 2.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.076 5.076 3 C -0.117 4.117 4 C -0.170 4.170 5 C -0.154 4.154 6 O -0.352 6.352 7 Si 0.762 3.238 8 H -0.172 1.172 9 H -0.179 1.179 10 H -0.175 1.175 11 C -0.136 4.136 12 C -0.167 4.167 13 C 0.380 3.620 14 O -0.425 6.425 15 N -0.367 5.367 16 C 0.037 3.963 17 C -0.155 4.155 18 C -0.489 4.489 19 Si 1.186 2.814 20 C -0.555 4.555 21 C -0.553 4.553 22 C -0.488 4.488 23 C -0.155 4.155 24 H 0.098 0.902 25 H 0.102 0.898 26 H 0.125 0.875 27 H 0.185 0.815 28 H 0.090 0.910 29 H 0.224 0.776 30 H 0.164 0.836 31 H 0.238 0.762 32 H 0.108 0.892 33 H 0.083 0.917 34 H 0.087 0.913 35 H 0.096 0.904 36 H 0.095 0.905 37 H 0.088 0.912 38 H 0.088 0.912 39 H 0.088 0.912 40 H 0.088 0.912 41 H 0.088 0.912 42 H 0.088 0.912 43 H 0.097 0.903 44 H 0.099 0.901 45 H 0.090 0.910 46 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 0.602 0.501 -0.691 1.044 hybrid contribution 0.990 0.253 -0.043 1.023 sum 1.592 0.755 -0.735 1.909 Atomic orbital electron populations 1.22367 0.75528 1.05770 1.04114 1.43744 1.06976 1.04638 1.52212 1.21724 0.90145 0.91710 1.08122 1.18619 0.91999 0.94117 1.12244 1.23943 0.93051 1.08074 0.90376 1.86516 1.40341 1.65631 1.42678 0.85892 0.81420 0.75038 0.81487 1.17221 1.17890 1.17477 1.21150 0.94303 0.94454 1.03651 1.20057 0.90257 0.87651 1.18755 1.16944 0.85591 0.83446 0.76047 1.90792 1.16126 1.84750 1.50850 1.45790 1.11445 1.05699 1.73777 1.21069 0.97624 0.79230 0.98389 1.21563 0.99553 0.98059 0.96358 1.26237 1.07453 1.07783 1.07402 0.79679 0.67391 0.66976 0.67344 1.26072 1.09434 1.13447 1.06572 1.26087 1.10906 1.06334 1.11981 1.26204 1.08452 1.01924 1.12236 1.21470 0.96867 0.95654 1.01461 0.90225 0.89788 0.87486 0.81535 0.90999 0.77612 0.83592 0.76210 0.89214 0.91662 0.91320 0.90372 0.90485 0.91239 0.91216 0.91162 0.91202 0.91229 0.91238 0.90297 0.90083 0.91010 0.91011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.03 10.64 59.85 0.64 0.67 16 2 N -0.40 -1.00 3.16 -120.23 -0.38 -1.38 16 3 C 0.02 0.03 9.94 -16.91 -0.17 -0.14 16 4 C -0.16 -0.32 5.47 -105.02 -0.57 -0.89 16 5 C -0.04 0.01 3.01 36.00 0.11 0.11 16 6 O -0.55 -0.20 12.86 -35.23 -0.45 -0.65 16 7 Si 0.94 -0.64 25.87 -169.99 -4.40 -5.04 16 8 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 9 H -0.26 0.13 7.11 56.52 0.40 0.53 16 10 H -0.25 0.05 7.11 56.52 0.40 0.45 16 11 C -0.11 -0.22 10.28 -39.12 -0.40 -0.62 16 12 C -0.05 -0.16 6.88 -81.98 -0.56 -0.73 16 13 C 0.59 2.03 7.53 -12.85 -0.10 1.94 16 14 O -0.55 -3.30 14.11 5.19 0.07 -3.22 16 15 N -0.72 -0.47 5.02 -55.58 -0.28 -0.75 16 16 C 0.14 0.03 2.01 -68.41 -0.14 -0.10 16 17 C -0.12 -0.05 5.15 -26.60 -0.14 -0.19 16 18 C -0.40 0.19 4.98 37.53 0.19 0.38 16 19 Si 0.99 -2.41 11.60 -169.99 -1.97 -4.38 16 20 C -0.45 0.54 8.65 101.05 0.87 1.41 16 21 C -0.45 0.72 8.65 101.05 0.87 1.60 16 22 C -0.40 0.78 4.98 37.53 0.19 0.96 16 23 C -0.12 0.19 5.05 -26.60 -0.13 0.06 16 24 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 25 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 26 H 0.11 0.22 6.21 -51.93 -0.32 -0.11 16 27 H 0.17 -0.12 6.19 -52.49 -0.32 -0.44 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H 0.38 -1.53 8.74 45.56 0.40 -1.13 16 30 H 0.15 -0.02 7.50 -52.48 -0.39 -0.42 16 31 H 0.40 -0.62 7.54 -40.82 -0.31 -0.93 16 32 H 0.09 0.16 7.42 -51.93 -0.39 -0.22 16 33 H 0.06 -0.05 7.69 -51.93 -0.40 -0.45 16 34 H 0.07 0.19 7.69 -51.93 -0.40 -0.20 16 35 H 0.08 0.02 7.99 -51.93 -0.41 -0.39 16 36 H 0.08 -0.05 7.99 -51.93 -0.41 -0.46 16 37 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 38 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 39 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 40 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 41 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 42 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 43 H 0.08 -0.12 7.99 -51.93 -0.41 -0.54 16 44 H 0.08 -0.19 7.99 -51.93 -0.41 -0.61 16 45 H 0.07 -0.12 8.13 -51.93 -0.42 -0.54 16 46 H 0.07 -0.19 7.69 -51.93 -0.40 -0.59 16 LS Contribution 365.93 15.07 5.51 5.51 Total: 0.00 -7.47 365.93 -8.39 -15.86 By element: Atomic # 1 Polarization: -3.26 SS G_CDS: -7.15 Total: -10.41 kcal Atomic # 6 Polarization: 3.81 SS G_CDS: 0.65 Total: 4.46 kcal Atomic # 7 Polarization: -1.47 SS G_CDS: -0.66 Total: -2.13 kcal Atomic # 8 Polarization: -3.50 SS G_CDS: -0.38 Total: -3.88 kcal Atomic # 14 Polarization: -3.05 SS G_CDS: -6.37 Total: -9.42 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -7.47 -8.39 -15.86 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16807780_10803934.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.248 kcal (2) G-P(sol) polarization free energy of solvation -7.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.862 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds