Wall clock time and date at job start Sun Mar 7 2021 05:48:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86297 * 1 3 3 C 1.86297 * 110.00352 * 2 1 4 4 C 1.87382 * 109.94668 * 121.21886 * 2 1 3 5 5 C 1.53717 * 107.28219 * 164.90369 * 4 2 1 6 6 C 1.52528 * 109.63927 * 300.87244 * 5 4 2 7 7 N 1.46499 * 109.04114 * 197.54953 * 6 5 4 8 8 C 1.34771 * 120.00102 * 155.00057 * 7 6 5 9 9 O 1.21578 * 119.99991 * 0.02562 * 8 7 6 10 10 C 1.47699 * 120.00370 * 180.02562 * 8 7 6 11 11 C 1.39616 * 120.15127 * 359.97438 * 10 8 7 12 12 C 1.38114 * 119.84635 * 180.02562 * 11 10 8 13 13 F 1.35101 * 119.91209 * 180.02562 * 12 11 10 14 14 C 1.38608 * 120.16995 * 359.97438 * 12 11 10 15 15 C 1.50699 * 119.84311 * 180.02562 * 14 12 11 16 16 O 1.42907 * 109.46921 * 74.98280 * 15 14 12 17 17 Si 1.86293 * 109.47348 * 314.98425 * 15 14 12 18 18 H 1.48497 * 109.47309 * 59.99800 * 17 15 14 19 19 H 1.48498 * 109.47349 * 180.02562 * 17 15 14 20 20 H 1.48504 * 109.47016 * 299.99980 * 17 15 14 21 21 C 1.38233 * 120.31418 * 0.02562 * 14 12 11 22 22 C 1.38275 * 120.14337 * 359.97438 * 21 14 12 23 23 F 1.35100 * 120.07937 * 180.02562 * 22 21 14 24 24 C 1.52523 * 111.65251 * 76.99616 * 6 5 4 25 25 C 1.53714 * 109.63944 * 283.00283 * 24 6 5 26 26 H 1.08999 * 109.47219 * 298.78400 * 1 2 3 27 27 H 1.09003 * 109.47066 * 58.78076 * 1 2 3 28 28 H 1.08998 * 109.47307 * 178.77685 * 1 2 3 29 29 H 1.09004 * 109.47756 * 181.21965 * 3 2 1 30 30 H 1.09000 * 109.47457 * 301.22073 * 3 2 1 31 31 H 1.08999 * 109.47171 * 61.21956 * 3 2 1 32 32 H 1.09004 * 109.88870 * 45.45857 * 4 2 1 33 33 H 1.09001 * 109.95811 * 284.38134 * 4 2 1 34 34 H 1.09003 * 109.44066 * 180.82435 * 5 4 2 35 35 H 1.08996 * 109.44181 * 60.93053 * 5 4 2 36 36 H 1.08989 * 109.04730 * 316.50449 * 6 5 4 37 37 H 0.97007 * 120.00044 * 335.00861 * 7 6 5 38 38 H 1.07996 * 120.07542 * 359.97438 * 11 10 8 39 39 H 1.08998 * 109.46815 * 194.97980 * 15 14 12 40 40 H 0.96698 * 113.99724 * 300.00094 * 16 15 14 41 41 H 1.07998 * 119.92846 * 180.27338 * 21 14 12 42 42 H 1.09002 * 109.44420 * 43.05788 * 24 6 5 43 43 H 1.09003 * 109.44252 * 162.95737 * 24 6 5 44 44 H 1.08998 * 109.89445 * 299.68304 * 25 24 6 45 45 H 1.09000 * 109.89450 * 178.56690 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5002 1.7506 0.0000 4 6 2.5022 -0.9130 1.5064 5 6 3.9901 -1.2118 1.2619 6 6 4.1431 -2.0548 -0.0001 7 7 5.4684 -2.6790 -0.0001 8 6 5.6761 -3.8196 -0.6873 9 8 4.7636 -4.3302 -1.3076 10 6 7.0121 -4.4493 -0.6869 11 6 8.0623 -3.8654 0.0239 12 6 9.3092 -4.4594 0.0195 13 9 10.3264 -3.8958 0.7073 14 6 9.5194 -5.6327 -0.6878 15 6 10.8828 -6.2748 -0.6871 16 8 11.1070 -6.9152 0.5707 17 14 12.1840 -4.9699 -0.9602 18 1 12.1108 -3.9624 0.1282 19 1 13.5274 -5.6027 -0.9601 20 1 11.9510 -4.3044 -2.2672 21 6 8.4844 -6.2167 -1.3940 22 6 7.2309 -5.6331 -1.3985 23 9 6.2201 -6.2052 -2.0886 24 6 3.9901 -1.2118 -1.2619 25 6 2.5022 -0.9130 -1.5064 26 1 -0.3633 0.4948 0.9007 27 1 -0.3633 0.5327 -0.8789 28 1 -0.3634 -1.0274 -0.0219 29 1 3.5900 1.7407 -0.0219 30 1 2.1240 2.2743 -0.8788 31 1 2.1596 2.2612 0.9007 32 1 1.9529 -1.8455 1.6355 33 1 2.3899 -0.2905 2.3941 34 1 4.3953 -1.7575 2.1140 35 1 4.5332 -0.2746 1.1403 36 1 3.3825 -2.8354 -0.0007 37 1 6.1965 -2.2715 0.4947 38 1 7.9003 -2.9510 0.5752 39 1 10.9365 -7.0143 -1.4860 40 1 11.0735 -6.3157 1.3287 41 1 8.6540 -7.1333 -1.9393 42 1 4.5332 -0.2746 -1.1403 43 1 4.3953 -1.7574 -2.1141 44 1 1.9530 -1.8455 -1.6357 45 1 2.3900 -0.2893 -2.3932 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16807780_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:48:59 Heat of formation + Delta-G solvation = -169.803854 kcal Electronic energy + Delta-G solvation = -28161.473464 eV Core-core repulsion = 23938.340732 eV Total energy + Delta-G solvation = -4223.132732 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 343.133 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -50.55800 -49.96561 -41.39233 -40.02565 -38.04661 -37.59377 -34.42572 -32.90182 -32.13609 -31.41058 -29.35515 -28.50800 -28.16531 -26.42439 -24.61298 -23.63932 -23.49948 -21.84052 -21.58959 -19.56414 -19.18107 -18.57070 -17.96777 -17.63523 -17.19896 -17.02197 -16.68815 -16.27473 -16.10638 -15.98624 -15.78734 -15.64716 -15.17326 -15.07211 -14.66906 -14.51787 -14.11945 -14.04509 -14.02732 -13.90769 -13.50227 -13.46957 -13.36250 -13.31637 -13.18286 -13.07584 -13.03895 -12.62253 -12.54460 -12.24147 -12.21187 -11.86197 -11.41192 -11.07707 -10.88603 -10.84481 -10.56092 -10.43627 -10.34249 -10.08381 -9.82439 -0.82257 -0.36685 0.95028 1.36088 1.39726 1.51543 1.67168 1.77232 1.81480 1.86039 1.93084 2.29216 2.54403 2.71991 2.80329 3.03882 3.19376 3.34195 3.46664 3.66803 3.72941 3.96180 4.09064 4.13056 4.17201 4.28336 4.29780 4.41464 4.51651 4.56793 4.63523 4.66886 4.67726 4.70463 4.71774 4.72935 4.74172 4.81384 5.00850 5.12938 5.20664 5.26004 5.33472 5.36230 5.40489 5.49808 5.52893 6.28509 6.31551 7.05898 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.448 4.448 2 Si 0.990 3.010 3 C -0.445 4.445 4 C -0.403 4.403 5 C -0.116 4.116 6 C 0.136 3.864 7 N -0.721 5.721 8 C 0.559 3.441 9 O -0.512 6.512 10 C -0.146 4.146 11 C -0.087 4.087 12 C 0.073 3.927 13 F -0.120 7.120 14 C -0.094 4.094 15 C -0.085 4.085 16 O -0.528 6.528 17 Si 0.938 3.062 18 H -0.226 1.226 19 H -0.249 1.249 20 H -0.249 1.249 21 C -0.114 4.114 22 C 0.158 3.842 23 F -0.105 7.105 24 C -0.117 4.117 25 C -0.403 4.403 26 H 0.069 0.931 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.069 0.931 32 H 0.079 0.921 33 H 0.081 0.919 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.093 0.907 37 H 0.399 0.601 38 H 0.152 0.848 39 H 0.128 0.872 40 H 0.378 0.622 41 H 0.159 0.841 42 H 0.065 0.935 43 H 0.068 0.932 44 H 0.079 0.921 45 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.761 3.636 2.229 4.614 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.556 4.556 2 Si 1.187 2.813 3 C -0.553 4.553 4 C -0.489 4.489 5 C -0.154 4.154 6 C 0.033 3.967 7 N -0.373 5.373 8 C 0.345 3.655 9 O -0.388 6.388 10 C -0.150 4.150 11 C -0.106 4.106 12 C 0.054 3.946 13 F -0.099 7.099 14 C -0.096 4.096 15 C -0.195 4.195 16 O -0.333 6.333 17 Si 0.758 3.242 18 H -0.149 1.149 19 H -0.173 1.173 20 H -0.173 1.173 21 C -0.133 4.133 22 C 0.138 3.862 23 F -0.083 7.083 24 C -0.156 4.156 25 C -0.490 4.490 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.098 0.902 33 H 0.100 0.900 34 H 0.089 0.911 35 H 0.090 0.910 36 H 0.111 0.889 37 H 0.234 0.766 38 H 0.170 0.830 39 H 0.146 0.854 40 H 0.226 0.774 41 H 0.177 0.823 42 H 0.084 0.916 43 H 0.087 0.913 44 H 0.098 0.902 45 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.763 3.373 1.273 4.013 hybrid contribution -0.082 0.280 0.600 0.667 sum 1.682 3.653 1.873 4.436 Atomic orbital electron populations 1.26071 1.20446 1.04584 1.04455 0.79669 0.67145 0.67324 0.67181 1.26088 1.06252 1.18475 1.04488 1.26209 0.99278 1.08614 1.14769 1.21466 0.97635 0.99868 0.96444 1.21131 0.84252 0.96094 0.95239 1.46032 1.13766 1.25366 1.52141 1.17830 0.87038 0.80861 0.79814 1.90895 1.43313 1.62726 1.41818 1.19926 0.95267 0.97045 1.02768 1.21132 0.90368 1.00460 0.98649 1.17367 0.85713 0.93956 0.97572 1.91614 1.56345 1.84436 1.77457 1.20414 0.98186 0.93949 0.97064 1.25096 0.96902 1.06471 0.91010 1.86591 1.94066 1.37911 1.14770 0.86080 0.78124 0.77604 0.82406 1.14869 1.17308 1.17256 1.20966 0.89781 1.01496 1.01051 1.17670 0.85383 0.91125 0.92065 1.91655 1.57960 1.82996 1.75659 1.21567 0.96940 0.99622 0.97430 1.26242 0.99808 1.08437 1.14472 0.91225 0.91183 0.91113 0.91269 0.91189 0.91219 0.90203 0.90036 0.91068 0.91030 0.88858 0.76589 0.83028 0.85437 0.77436 0.82301 0.91605 0.91343 0.90241 0.90373 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.67 8.65 101.05 0.87 1.55 16 2 Si 0.99 -2.89 11.60 -169.99 -1.97 -4.86 16 3 C -0.45 0.96 8.65 101.05 0.87 1.83 16 4 C -0.40 1.00 4.98 37.53 0.19 1.19 16 5 C -0.12 0.29 5.05 -26.60 -0.13 0.16 16 6 C 0.14 -0.08 2.03 -68.42 -0.14 -0.22 16 7 N -0.72 0.60 5.00 -55.27 -0.28 0.32 16 8 C 0.56 1.24 7.52 -12.40 -0.09 1.15 16 9 O -0.51 -3.19 15.01 5.30 0.08 -3.11 16 10 C -0.15 -0.10 5.88 -104.92 -0.62 -0.71 16 11 C -0.09 0.16 9.52 -39.11 -0.37 -0.22 16 12 C 0.07 -0.09 6.60 -39.49 -0.26 -0.35 16 13 F -0.12 0.14 12.55 2.25 0.03 0.17 16 14 C -0.09 0.10 4.79 -104.49 -0.50 -0.40 16 15 C -0.09 0.15 2.80 36.01 0.10 0.25 16 16 O -0.53 0.35 12.88 -35.23 -0.45 -0.11 16 17 Si 0.94 -1.15 26.08 -169.99 -4.43 -5.59 16 18 H -0.23 0.20 5.28 56.52 0.30 0.50 16 19 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 20 H -0.25 0.08 7.11 56.52 0.40 0.48 16 21 C -0.11 0.08 9.63 -39.57 -0.38 -0.30 16 22 C 0.16 0.24 7.28 -38.97 -0.28 -0.05 16 23 F -0.10 -0.43 15.55 2.25 0.04 -0.40 16 24 C -0.12 0.04 5.18 -26.60 -0.14 -0.09 16 25 C -0.40 0.40 4.98 37.53 0.19 0.58 16 26 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 27 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 28 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 29 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 30 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 31 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 32 H 0.08 -0.16 7.99 -51.93 -0.41 -0.58 16 33 H 0.08 -0.24 7.99 -51.93 -0.41 -0.65 16 34 H 0.07 -0.18 8.13 -51.93 -0.42 -0.61 16 35 H 0.07 -0.26 7.69 -51.93 -0.40 -0.66 16 36 H 0.09 0.12 7.34 -51.93 -0.38 -0.26 16 37 H 0.40 -1.52 6.62 -40.82 -0.27 -1.79 16 38 H 0.15 -0.72 6.40 -52.49 -0.34 -1.06 16 39 H 0.13 -0.41 7.76 -51.93 -0.40 -0.81 16 40 H 0.38 -1.31 8.39 45.56 0.38 -0.92 16 41 H 0.16 -0.42 7.99 -52.49 -0.42 -0.84 16 42 H 0.07 -0.12 7.69 -51.93 -0.40 -0.52 16 43 H 0.07 0.13 7.92 -51.93 -0.41 -0.28 16 44 H 0.08 0.00 7.99 -51.93 -0.41 -0.42 16 45 H 0.08 -0.09 7.99 -51.93 -0.41 -0.50 16 LS Contribution 367.37 15.07 5.54 5.54 Total: 0.00 -7.19 367.37 -8.25 -15.44 By element: Atomic # 1 Polarization: -5.67 SS G_CDS: -6.10 Total: -11.77 kcal Atomic # 6 Polarization: 5.06 SS G_CDS: -0.70 Total: 4.36 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: -0.28 Total: 0.32 kcal Atomic # 8 Polarization: -2.85 SS G_CDS: -0.37 Total: -3.22 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.06 Total: -0.23 kcal Atomic # 14 Polarization: -4.04 SS G_CDS: -6.40 Total: -10.44 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -7.19 -8.25 -15.44 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16807780_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -154.367 kcal (2) G-P(sol) polarization free energy of solvation -7.186 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -161.553 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.251 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.437 kcal (6) G-S(sol) free energy of system = (1) + (5) -169.804 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds