Wall clock time and date at job start Sun Mar 7 2021 06:10:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86296 * 109.99970 * 2 1 4 4 C 1.87383 * 109.94654 * 121.21774 * 2 1 3 5 5 C 1.53717 * 107.28076 * 164.90256 * 4 2 1 6 6 C 1.52519 * 109.64497 * 300.88002 * 5 4 2 7 7 N 1.46500 * 109.04373 * 197.54995 * 6 5 4 8 8 C 1.34779 * 120.00169 * 154.99418 * 7 6 5 9 9 O 1.21282 * 119.99922 * 0.02562 * 8 7 6 10 10 C 1.50699 * 120.00037 * 180.02562 * 8 7 6 11 11 O 1.42905 * 109.46972 * 180.02562 * 10 8 7 12 12 C 1.35896 * 117.00039 * 180.02562 * 11 10 8 13 13 C 1.38738 * 120.05353 * 359.72616 * 12 11 10 14 14 C 1.38148 * 119.94048 * 179.74738 * 13 12 11 15 15 C 1.38261 * 120.05800 * 0.50500 * 14 13 12 16 16 C 1.50703 * 119.94589 * 179.75166 * 15 14 13 17 17 O 1.42902 * 109.46840 * 245.01936 * 16 15 14 18 18 Si 1.86294 * 109.47009 * 5.01633 * 16 15 14 19 19 H 1.48499 * 109.47378 * 60.00493 * 18 16 15 20 20 H 1.48497 * 109.47077 * 180.02562 * 18 16 15 21 21 H 1.48507 * 109.47291 * 300.00372 * 18 16 15 22 22 C 1.38262 * 120.11048 * 359.76434 * 15 14 13 23 23 C 1.38145 * 120.05942 * 359.97438 * 22 15 14 24 24 C 1.52523 * 111.66129 * 76.98891 * 6 5 4 25 25 C 1.53720 * 109.63962 * 283.01248 * 24 6 5 26 26 H 1.08998 * 109.47119 * 298.77389 * 1 2 3 27 27 H 1.09000 * 109.47202 * 58.78333 * 1 2 3 28 28 H 1.09005 * 109.47009 * 178.78225 * 1 2 3 29 29 H 1.09000 * 109.47571 * 181.21788 * 3 2 1 30 30 H 1.09003 * 109.47363 * 301.22300 * 3 2 1 31 31 H 1.08999 * 109.47224 * 61.21832 * 3 2 1 32 32 H 1.09004 * 109.89222 * 45.46474 * 4 2 1 33 33 H 1.08991 * 109.89586 * 284.34782 * 4 2 1 34 34 H 1.08998 * 109.44313 * 180.81895 * 5 4 2 35 35 H 1.09003 * 109.44326 * 60.92757 * 5 4 2 36 36 H 1.09009 * 109.04219 * 316.49785 * 6 5 4 37 37 H 0.96996 * 119.99986 * 335.00015 * 7 6 5 38 38 H 1.09000 * 109.47247 * 60.00371 * 10 8 7 39 39 H 1.09001 * 109.47358 * 299.99798 * 10 8 7 40 40 H 1.07995 * 120.02746 * 359.97438 * 13 12 11 41 41 H 1.08004 * 119.97067 * 180.22662 * 14 13 12 42 42 H 1.08995 * 109.47668 * 125.02330 * 16 15 14 43 43 H 0.96699 * 113.99859 * 59.99468 * 17 16 15 44 44 H 1.08009 * 119.97583 * 179.97438 * 22 15 14 45 45 H 1.08000 * 120.03441 * 179.97438 * 23 22 15 46 46 H 1.08999 * 109.43834 * 43.05661 * 24 6 5 47 47 H 1.08998 * 109.44457 * 162.96027 * 24 6 5 48 48 H 1.08998 * 109.89468 * 299.67850 * 25 24 6 49 49 H 1.08999 * 109.89168 * 178.56779 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5002 1.7506 0.0000 4 6 2.5023 -0.9129 1.5064 5 6 3.9901 -1.2118 1.2619 6 6 4.1432 -2.0546 -0.0001 7 7 5.4686 -2.6788 -0.0001 8 6 5.6762 -3.8195 -0.6874 9 8 4.7660 -4.3288 -1.3062 10 6 7.0394 -4.4619 -0.6869 11 8 7.0065 -5.6497 -1.4809 12 6 8.1637 -6.3545 -1.5850 13 6 9.3089 -5.9089 -0.9410 14 6 10.4828 -6.6300 -1.0441 15 6 10.5196 -7.7892 -1.7968 16 6 11.8029 -8.5708 -1.9122 17 8 12.2543 -8.5478 -3.2678 18 14 13.0976 -7.8046 -0.8135 19 1 12.6285 -7.8285 0.5953 20 1 14.3623 -8.5744 -0.9276 21 1 13.3342 -6.3997 -1.2326 22 6 9.3810 -8.2323 -2.4442 23 6 8.2033 -7.5178 -2.3398 24 6 3.9902 -1.2117 -1.2620 25 6 2.5022 -0.9129 -1.5064 26 1 -0.3633 0.4947 0.9008 27 1 -0.3633 0.5326 -0.8789 28 1 -0.3633 -1.0275 -0.0218 29 1 3.5899 1.7407 -0.0218 30 1 2.1239 2.2743 -0.8788 31 1 2.1595 2.2613 0.9007 32 1 1.9530 -1.8456 1.6356 33 1 2.3901 -0.2894 2.3933 34 1 4.3954 -1.7573 2.1140 35 1 4.5333 -0.2746 1.1402 36 1 3.3826 -2.8354 -0.0007 37 1 6.1966 -2.2713 0.4946 38 1 7.3213 -4.7153 0.3350 39 1 7.7687 -3.7671 -1.1034 40 1 9.2818 -5.0012 -0.3566 41 1 11.3737 -6.2856 -0.5400 42 1 11.6292 -9.6019 -1.6046 43 1 12.4292 -7.6601 -3.6091 44 1 9.4123 -9.1379 -3.0320 45 1 7.3143 -7.8641 -2.8460 46 1 4.5332 -0.2745 -1.1403 47 1 4.3954 -1.7573 -2.1141 48 1 1.9530 -1.8454 -1.6357 49 1 2.3900 -0.2893 -2.3933 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16807780_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:10:42 Heat of formation + Delta-G solvation = -127.581789 kcal Electronic energy + Delta-G solvation = -26411.210306 eV Core-core repulsion = 22654.596600 eV Total energy + Delta-G solvation = -3756.613706 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 337.167 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.57185 -40.72611 -39.13713 -37.81780 -37.07860 -34.11501 -32.39196 -32.14181 -31.75453 -29.89050 -29.23167 -28.51162 -26.61368 -26.00777 -24.01489 -23.60313 -22.42245 -21.60147 -21.49025 -19.54167 -18.50498 -18.11001 -17.46996 -17.22565 -16.99550 -16.48636 -16.22363 -15.99388 -15.65079 -15.56853 -15.16683 -15.02887 -14.89598 -14.44326 -14.13928 -14.06575 -13.92223 -13.76825 -13.60495 -13.53309 -13.43830 -13.40443 -13.31554 -13.17506 -13.05982 -12.61789 -12.30974 -12.25568 -12.20838 -12.11242 -12.06485 -11.86387 -11.59433 -10.94873 -10.85722 -10.55120 -10.41262 -10.36349 -10.07587 -10.04659 -9.22421 0.28073 0.29313 1.13671 1.39250 1.43966 1.48297 1.50755 1.66783 1.79215 1.83244 1.88681 2.51930 2.57446 2.65411 3.43773 3.48193 3.63270 3.69482 3.73228 3.85109 3.86375 3.87590 3.98458 4.10628 4.24649 4.27775 4.40988 4.43503 4.53561 4.54165 4.65706 4.66347 4.67133 4.69892 4.71463 4.72548 4.80255 4.94005 5.00269 5.12158 5.14458 5.20455 5.24226 5.25446 5.35897 5.40275 5.49481 5.49834 5.52285 5.68057 6.23254 6.38917 6.54999 7.11557 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.448 4.448 2 Si 0.991 3.009 3 C -0.445 4.445 4 C -0.403 4.403 5 C -0.115 4.115 6 C 0.138 3.862 7 N -0.725 5.725 8 C 0.515 3.485 9 O -0.510 6.510 10 C 0.039 3.961 11 O -0.288 6.288 12 C 0.134 3.866 13 C -0.206 4.206 14 C -0.084 4.084 15 C -0.158 4.158 16 C -0.076 4.076 17 O -0.539 6.539 18 Si 0.949 3.051 19 H -0.251 1.251 20 H -0.254 1.254 21 H -0.253 1.253 22 C -0.048 4.048 23 C -0.145 4.145 24 C -0.117 4.117 25 C -0.404 4.404 26 H 0.069 0.931 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.069 0.931 32 H 0.079 0.921 33 H 0.081 0.919 34 H 0.070 0.930 35 H 0.071 0.929 36 H 0.092 0.908 37 H 0.401 0.599 38 H 0.094 0.906 39 H 0.094 0.906 40 H 0.131 0.869 41 H 0.123 0.877 42 H 0.117 0.883 43 H 0.376 0.624 44 H 0.137 0.863 45 H 0.136 0.864 46 H 0.065 0.935 47 H 0.067 0.933 48 H 0.078 0.922 49 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.903 4.471 3.572 6.031 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.556 4.556 2 Si 1.188 2.812 3 C -0.553 4.553 4 C -0.489 4.489 5 C -0.153 4.153 6 C 0.034 3.966 7 N -0.379 5.379 8 C 0.299 3.701 9 O -0.384 6.384 10 C -0.040 4.040 11 O -0.200 6.200 12 C 0.089 3.911 13 C -0.225 4.225 14 C -0.102 4.102 15 C -0.158 4.158 16 C -0.186 4.186 17 O -0.344 6.344 18 Si 0.772 3.228 19 H -0.175 1.175 20 H -0.178 1.178 21 H -0.177 1.177 22 C -0.066 4.066 23 C -0.164 4.164 24 C -0.156 4.156 25 C -0.490 4.490 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.098 0.902 33 H 0.100 0.900 34 H 0.089 0.911 35 H 0.090 0.910 36 H 0.110 0.890 37 H 0.235 0.765 38 H 0.112 0.888 39 H 0.112 0.888 40 H 0.148 0.852 41 H 0.141 0.859 42 H 0.135 0.865 43 H 0.223 0.777 44 H 0.154 0.846 45 H 0.154 0.846 46 H 0.084 0.916 47 H 0.086 0.914 48 H 0.097 0.903 49 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.608 3.761 3.628 5.467 hybrid contribution 0.240 0.789 0.119 0.833 sum 1.848 4.549 3.747 6.177 Atomic orbital electron populations 1.26073 1.20455 1.04585 1.04454 0.79654 0.67135 0.67291 0.67146 1.26090 1.06242 1.18494 1.04490 1.26209 0.99329 1.08589 1.14790 1.21456 0.97573 0.99859 0.96435 1.21101 0.84309 0.95997 0.95175 1.45980 1.13808 1.25450 1.52647 1.20016 0.89494 0.80922 0.79632 1.90788 1.44029 1.62344 1.41213 1.22496 0.96715 0.87536 0.97229 1.86177 1.31031 1.35912 1.66869 1.19086 0.84641 0.91998 0.95387 1.21151 0.93063 1.02828 1.05443 1.20829 0.97562 0.94226 0.97587 1.20217 0.96853 0.97232 1.01536 1.24902 0.97776 1.05253 0.90717 1.86521 1.88005 1.33549 1.26338 0.85708 0.78557 0.79754 0.78800 1.17472 1.17784 1.17688 1.20865 0.90502 0.98842 0.96388 1.20553 0.99701 0.94327 1.01819 1.21567 0.96925 0.99616 0.97458 1.26248 0.99838 1.08434 1.14492 0.91226 0.91178 0.91117 0.91278 0.91186 0.91222 0.90220 0.90050 0.91095 0.91048 0.89019 0.76490 0.88773 0.88785 0.85163 0.85914 0.86484 0.77693 0.84565 0.84574 0.91624 0.91392 0.90269 0.90384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.69 8.65 101.05 0.87 1.56 16 2 Si 0.99 -2.94 11.59 -169.99 -1.97 -4.91 16 3 C -0.45 0.98 8.65 101.05 0.87 1.86 16 4 C -0.40 1.03 4.98 37.53 0.19 1.22 16 5 C -0.12 0.31 5.05 -26.60 -0.13 0.17 16 6 C 0.14 -0.11 2.03 -68.42 -0.14 -0.25 16 7 N -0.73 1.11 5.05 -54.28 -0.27 0.84 16 8 C 0.52 0.79 7.66 -10.99 -0.08 0.71 16 9 O -0.51 -3.31 16.17 -14.35 -0.23 -3.54 16 10 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 11 O -0.29 -0.87 9.67 -39.33 -0.38 -1.25 16 12 C 0.13 0.26 6.69 -39.21 -0.26 0.00 16 13 C -0.21 -0.02 9.04 -39.43 -0.36 -0.38 16 14 C -0.08 -0.01 8.66 -39.61 -0.34 -0.35 16 15 C -0.16 -0.06 5.35 -104.60 -0.56 -0.62 16 16 C -0.08 0.04 2.80 36.01 0.10 0.14 16 17 O -0.54 -0.15 12.83 -35.23 -0.45 -0.60 16 18 Si 0.95 -0.80 25.13 -169.99 -4.27 -5.07 16 19 H -0.25 0.07 7.11 56.52 0.40 0.47 16 20 H -0.25 -0.19 7.11 56.52 0.40 0.22 16 21 H -0.25 0.21 7.04 56.52 0.40 0.61 16 22 C -0.05 -0.04 9.68 -39.61 -0.38 -0.42 16 23 C -0.15 -0.26 9.99 -39.43 -0.39 -0.66 16 24 C -0.12 0.06 5.18 -26.60 -0.14 -0.08 16 25 C -0.40 0.39 4.98 37.53 0.19 0.58 16 26 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 27 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 28 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 29 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 30 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 31 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 32 H 0.08 -0.16 7.99 -51.93 -0.41 -0.58 16 33 H 0.08 -0.24 7.99 -51.93 -0.41 -0.66 16 34 H 0.07 -0.20 8.13 -51.93 -0.42 -0.62 16 35 H 0.07 -0.27 7.69 -51.93 -0.40 -0.67 16 36 H 0.09 0.12 7.34 -51.92 -0.38 -0.27 16 37 H 0.40 -1.95 8.58 -40.82 -0.35 -2.30 16 38 H 0.09 -0.31 7.67 -51.93 -0.40 -0.71 16 39 H 0.09 -0.31 7.65 -51.93 -0.40 -0.71 16 40 H 0.13 -0.34 6.30 -52.49 -0.33 -0.67 16 41 H 0.12 -0.18 4.86 -52.48 -0.25 -0.43 16 42 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 43 H 0.38 -1.07 8.70 45.56 0.40 -0.67 16 44 H 0.14 -0.04 8.06 -52.48 -0.42 -0.46 16 45 H 0.14 0.18 8.06 -52.49 -0.42 -0.24 16 46 H 0.07 -0.13 7.69 -51.93 -0.40 -0.53 16 47 H 0.07 0.13 7.92 -51.93 -0.41 -0.28 16 48 H 0.08 0.00 7.99 -51.93 -0.41 -0.41 16 49 H 0.08 -0.08 7.99 -51.93 -0.41 -0.50 16 LS Contribution 392.66 15.07 5.92 5.92 Total: 0.00 -8.56 392.66 -9.60 -18.16 By element: Atomic # 1 Polarization: -5.63 SS G_CDS: -7.55 Total: -13.18 kcal Atomic # 6 Polarization: 4.02 SS G_CDS: -0.38 Total: 3.63 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.27 Total: 0.84 kcal Atomic # 8 Polarization: -4.33 SS G_CDS: -1.06 Total: -5.39 kcal Atomic # 14 Polarization: -3.74 SS G_CDS: -6.24 Total: -9.98 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -8.56 -9.60 -18.16 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16807780_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.422 kcal (2) G-P(sol) polarization free energy of solvation -8.564 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.595 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.582 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds