Wall clock time and date at job start Sun Mar 7 2021 06:17:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86296 * 1 3 3 C 1.86297 * 110.00173 * 2 1 4 4 C 1.87380 * 109.94793 * 121.22057 * 2 1 3 5 5 C 1.53707 * 107.28613 * 164.90577 * 4 2 1 6 6 C 1.52526 * 109.63880 * 300.87386 * 5 4 2 7 7 N 1.46507 * 109.04145 * 197.55257 * 6 5 4 8 8 C 1.34774 * 119.99975 * 155.00011 * 7 6 5 9 9 O 1.21287 * 120.00070 * 359.97438 * 8 7 6 10 10 C 1.50696 * 119.99994 * 179.97438 * 8 7 6 11 11 O 1.42899 * 109.47561 * 180.02562 * 10 8 7 12 12 C 1.35894 * 117.00434 * 180.02562 * 11 10 8 13 13 C 1.38709 * 120.05744 * 359.97438 * 12 11 10 14 14 C 1.38159 * 119.94698 * 180.02562 * 13 12 11 15 15 C 1.38241 * 120.05581 * 359.97438 * 14 13 12 16 16 C 1.50706 * 119.94735 * 179.97438 * 15 14 13 17 17 O 1.42895 * 109.47147 * 245.00352 * 16 15 14 18 18 Si 1.86299 * 109.46748 * 4.99994 * 16 15 14 19 19 H 1.48506 * 109.47139 * 179.97438 * 18 16 15 20 20 H 1.48505 * 109.47505 * 299.99883 * 18 16 15 21 21 H 1.48503 * 109.47188 * 60.00070 * 18 16 15 22 22 C 1.38293 * 120.11270 * 0.27563 * 15 14 13 23 23 C 1.38126 * 120.05159 * 359.45046 * 22 15 14 24 24 N 1.48002 * 120.02520 * 180.29946 * 23 22 15 25 25 O 1.21798 * 120.00044 * 0.24677 * 24 23 22 26 26 O 1.21801 * 119.99648 * 180.25377 * 24 23 22 27 27 C 1.52519 * 111.65797 * 76.99234 * 6 5 4 28 28 C 1.53719 * 109.63754 * 283.00954 * 27 6 5 29 29 H 1.09000 * 109.47003 * 298.77820 * 1 2 3 30 30 H 1.08998 * 109.47340 * 58.78384 * 1 2 3 31 31 H 1.08998 * 109.46997 * 178.78058 * 1 2 3 32 32 H 1.09003 * 109.47142 * 181.22005 * 3 2 1 33 33 H 1.09004 * 109.47151 * 301.21660 * 3 2 1 34 34 H 1.08997 * 109.47294 * 61.21563 * 3 2 1 35 35 H 1.08993 * 109.89597 * 45.45499 * 4 2 1 36 36 H 1.09012 * 109.88930 * 284.34811 * 4 2 1 37 37 H 1.09002 * 109.44563 * 180.82190 * 5 4 2 38 38 H 1.08999 * 109.44238 * 60.92271 * 5 4 2 39 39 H 1.09004 * 109.04193 * 316.49804 * 6 5 4 40 40 H 0.96996 * 119.99778 * 334.99235 * 7 6 5 41 41 H 1.08998 * 109.47376 * 59.99560 * 10 8 7 42 42 H 1.09005 * 109.46967 * 300.00150 * 10 8 7 43 43 H 1.08008 * 120.02343 * 359.97438 * 13 12 11 44 44 H 1.08008 * 119.97393 * 179.97438 * 14 13 12 45 45 H 1.09000 * 109.47318 * 124.99465 * 16 15 14 46 46 H 0.96700 * 113.99916 * 179.97438 * 17 16 15 47 47 H 1.08002 * 119.97160 * 179.70751 * 22 15 14 48 48 H 1.09000 * 109.44657 * 43.05827 * 27 6 5 49 49 H 1.08995 * 109.44303 * 162.96103 * 27 6 5 50 50 H 1.09000 * 109.89450 * 299.67636 * 28 27 6 51 51 H 1.09001 * 109.89206 * 178.57444 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5002 1.7506 0.0000 4 6 2.5022 -0.9130 1.5063 5 6 3.9901 -1.2118 1.2619 6 6 4.1431 -2.0547 0.0000 7 7 5.4685 -2.6790 0.0000 8 6 5.6761 -3.8196 -0.6873 9 8 4.7656 -4.3294 -1.3055 10 6 7.0395 -4.4615 -0.6877 11 8 7.0066 -5.6493 -1.4814 12 6 8.1641 -6.3536 -1.5862 13 6 9.3081 -5.9105 -0.9390 14 6 10.4837 -6.6280 -1.0476 15 6 10.5204 -7.7871 -1.8001 16 6 11.8043 -8.5676 -1.9173 17 8 12.2535 -8.5448 -3.2736 18 14 13.1001 -7.7996 -0.8210 19 1 14.3651 -8.5690 -0.9360 20 1 13.3348 -6.3947 -1.2412 21 1 12.6333 -7.8233 0.5886 22 6 9.3826 -8.2284 -2.4506 23 6 8.2034 -7.5176 -2.3405 24 7 6.9843 -7.9940 -3.0316 25 8 7.0196 -9.0155 -3.6939 26 8 5.9459 -7.3643 -2.9380 27 6 3.9901 -1.2118 -1.2619 28 6 2.5022 -0.9130 -1.5063 29 1 -0.3633 0.4947 0.9007 30 1 -0.3634 0.5326 -0.8788 31 1 -0.3633 -1.0274 -0.0219 32 1 3.5900 1.7406 -0.0219 33 1 2.1240 2.2742 -0.8789 34 1 2.1595 2.2613 0.9007 35 1 1.9530 -1.8455 1.6356 36 1 2.3900 -0.2893 2.3933 37 1 4.3953 -1.7574 2.1141 38 1 4.5331 -0.2746 1.1403 39 1 3.3825 -2.8355 -0.0006 40 1 6.1965 -2.2714 0.4946 41 1 7.3223 -4.7146 0.3341 42 1 7.7682 -3.7663 -1.1047 43 1 9.2799 -5.0047 -0.3513 44 1 11.3748 -6.2831 -0.5441 45 1 11.6321 -9.5987 -1.6087 46 1 13.0774 -9.0284 -3.4233 47 1 9.4151 -9.1317 -3.0417 48 1 4.5332 -0.2746 -1.1403 49 1 4.3953 -1.7574 -2.1140 50 1 1.9529 -1.8455 -1.6356 51 1 2.3900 -0.2894 -2.3933 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16807780_4549638.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:17:30 Heat of formation + Delta-G solvation = -118.192751 kcal Electronic energy + Delta-G solvation = -33057.796980 eV Core-core repulsion = 28470.573978 eV Total energy + Delta-G solvation = -4587.223002 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 382.161 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.97001 -41.72040 -40.85329 -39.52033 -37.88233 -37.49547 -37.07093 -34.14529 -33.46261 -32.43478 -32.12557 -30.17104 -29.25262 -28.49496 -27.56111 -26.87474 -26.22253 -24.02058 -23.58855 -22.68230 -21.64927 -21.55292 -20.34942 -19.44312 -19.10165 -18.75680 -18.41516 -18.26145 -17.61068 -17.48526 -17.15412 -16.60883 -16.24909 -16.10435 -15.80881 -15.70120 -15.28962 -15.09231 -14.81899 -14.49907 -14.21745 -14.05821 -13.96066 -13.84653 -13.80843 -13.47044 -13.40896 -13.30382 -13.21178 -13.16559 -13.03710 -12.85159 -12.61779 -12.45790 -12.30792 -12.21812 -12.15434 -12.05442 -11.85489 -11.76257 -11.68851 -10.96086 -10.87087 -10.85181 -10.64420 -10.54059 -10.35053 -10.06776 -9.84356 -1.07785 -0.32257 0.43127 0.57059 0.87378 1.13519 1.17782 1.24158 1.48104 1.64021 1.68586 1.80757 1.84534 1.96709 2.26604 2.55957 2.93607 3.08350 3.14708 3.43010 3.49216 3.57918 3.60049 3.65972 3.68691 3.76786 3.97612 4.07369 4.11458 4.19937 4.29635 4.32572 4.42323 4.47007 4.54988 4.67377 4.68079 4.71128 4.73587 4.74114 4.74816 4.81768 4.97055 5.01069 5.14039 5.21755 5.26475 5.36905 5.41349 5.47858 5.51961 5.55079 5.75758 6.32652 6.34147 6.99095 7.10382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.448 4.448 2 Si 0.991 3.009 3 C -0.445 4.445 4 C -0.403 4.403 5 C -0.115 4.115 6 C 0.138 3.862 7 N -0.725 5.725 8 C 0.513 3.487 9 O -0.494 6.494 10 C 0.030 3.970 11 O -0.253 6.253 12 C 0.200 3.800 13 C -0.208 4.208 14 C -0.031 4.031 15 C -0.112 4.112 16 C -0.080 4.080 17 O -0.544 6.544 18 Si 0.943 3.057 19 H -0.248 1.248 20 H -0.245 1.245 21 H -0.246 1.246 22 C 0.013 3.987 23 C -0.075 4.075 24 N 0.029 4.971 25 O -0.177 6.177 26 O -0.118 6.118 27 C -0.117 4.117 28 C -0.404 4.404 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.070 0.930 32 H 0.068 0.932 33 H 0.069 0.931 34 H 0.068 0.932 35 H 0.079 0.921 36 H 0.080 0.920 37 H 0.070 0.930 38 H 0.071 0.929 39 H 0.093 0.907 40 H 0.400 0.600 41 H 0.101 0.899 42 H 0.101 0.899 43 H 0.156 0.844 44 H 0.143 0.857 45 H 0.084 0.916 46 H 0.386 0.614 47 H 0.165 0.835 48 H 0.065 0.935 49 H 0.068 0.932 50 H 0.080 0.920 51 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.185 4.791 6.811 10.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.556 4.556 2 Si 1.188 2.812 3 C -0.553 4.553 4 C -0.489 4.489 5 C -0.153 4.153 6 C 0.035 3.965 7 N -0.379 5.379 8 C 0.296 3.704 9 O -0.366 6.366 10 C -0.049 4.049 11 O -0.162 6.162 12 C 0.150 3.850 13 C -0.227 4.227 14 C -0.048 4.048 15 C -0.113 4.113 16 C -0.190 4.190 17 O -0.350 6.350 18 Si 0.765 3.235 19 H -0.172 1.172 20 H -0.168 1.168 21 H -0.169 1.169 22 C -0.006 4.006 23 C -0.160 4.160 24 N 0.549 4.451 25 O -0.386 6.386 26 O -0.342 6.342 27 C -0.156 4.156 28 C -0.490 4.490 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.089 0.911 32 H 0.087 0.913 33 H 0.088 0.912 34 H 0.088 0.912 35 H 0.098 0.902 36 H 0.099 0.901 37 H 0.089 0.911 38 H 0.089 0.911 39 H 0.111 0.889 40 H 0.234 0.766 41 H 0.119 0.881 42 H 0.119 0.881 43 H 0.174 0.826 44 H 0.160 0.840 45 H 0.102 0.898 46 H 0.234 0.766 47 H 0.182 0.818 48 H 0.083 0.917 49 H 0.087 0.913 50 H 0.098 0.902 51 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 7.003 5.267 7.028 11.233 hybrid contribution 0.497 -0.333 -0.038 0.599 sum 7.500 4.934 6.990 11.378 Atomic orbital electron populations 1.26073 1.20456 1.04619 1.04437 0.79655 0.67162 0.67258 0.67161 1.26091 1.06214 1.18526 1.04479 1.26207 0.99318 1.08619 1.14781 1.21452 0.97592 0.99820 0.96408 1.21114 0.84196 0.96035 0.95178 1.45954 1.13870 1.25376 1.52732 1.19801 0.89202 0.81191 0.80214 1.90866 1.43505 1.61811 1.40412 1.22757 0.98100 0.86892 0.97149 1.86501 1.28410 1.35714 1.65575 1.18672 0.86527 0.88731 0.91065 1.21215 0.91634 1.04038 1.05862 1.21239 0.97929 0.91752 0.93927 1.19152 0.94341 0.96986 1.00865 1.24696 0.99171 1.03459 0.91673 1.86509 1.45796 1.78162 1.24572 0.85787 0.78093 0.81239 0.78419 1.17172 1.16812 1.16949 1.20806 0.88044 0.98420 0.93325 1.20557 0.88234 0.99205 1.07999 1.43318 1.02103 1.00196 0.99449 1.94547 1.91524 1.13617 1.38892 1.94699 1.18218 1.55720 1.65559 1.21566 0.96974 0.99571 0.97466 1.26249 0.99820 1.08508 1.14457 0.91253 0.91175 0.91079 0.91302 0.91185 0.91243 0.90177 0.90071 0.91129 0.91078 0.88884 0.76584 0.88103 0.88109 0.82604 0.83979 0.89770 0.76618 0.81756 0.91673 0.91316 0.90165 0.90377 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.61 8.65 101.05 0.87 1.49 16 2 Si 0.99 -2.86 11.59 -169.99 -1.97 -4.83 16 3 C -0.45 0.97 8.65 101.05 0.87 1.84 16 4 C -0.40 1.05 4.98 37.53 0.19 1.23 16 5 C -0.11 0.33 5.05 -26.61 -0.13 0.19 16 6 C 0.14 -0.13 2.03 -68.42 -0.14 -0.27 16 7 N -0.73 1.46 5.05 -54.28 -0.27 1.19 16 8 C 0.51 0.58 7.66 -10.99 -0.08 0.50 16 9 O -0.49 -3.27 16.17 -14.36 -0.23 -3.50 16 10 C 0.03 -0.05 5.22 36.00 0.19 0.13 16 11 O -0.25 -0.73 7.68 -49.76 -0.38 -1.12 16 12 C 0.20 0.33 6.67 -39.22 -0.26 0.07 16 13 C -0.21 0.42 9.04 -39.44 -0.36 0.06 16 14 C -0.03 0.06 8.66 -39.61 -0.34 -0.28 16 15 C -0.11 0.07 5.39 -104.60 -0.56 -0.49 16 16 C -0.08 0.21 2.79 36.01 0.10 0.31 16 17 O -0.54 0.88 12.81 -35.23 -0.45 0.43 16 18 Si 0.94 -3.09 25.13 -169.99 -4.27 -7.36 16 19 H -0.25 0.68 7.11 56.52 0.40 1.08 16 20 H -0.24 0.57 7.04 56.52 0.40 0.97 16 21 H -0.25 0.75 7.11 56.52 0.40 1.15 16 22 C 0.01 0.02 9.18 -39.60 -0.36 -0.35 16 23 C -0.08 -0.27 6.87 -79.81 -0.55 -0.82 16 24 N 0.03 0.21 4.45 34.03 0.15 0.36 16 25 O -0.18 -1.34 18.45 -29.46 -0.54 -1.88 16 26 O -0.12 -1.08 17.24 -36.49 -0.63 -1.70 16 27 C -0.12 0.06 5.18 -26.60 -0.14 -0.08 16 28 C -0.40 0.33 4.98 37.53 0.19 0.52 16 29 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 30 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 31 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 32 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 33 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 34 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 35 H 0.08 -0.16 7.99 -51.93 -0.41 -0.58 16 36 H 0.08 -0.24 7.99 -51.92 -0.41 -0.66 16 37 H 0.07 -0.22 8.13 -51.93 -0.42 -0.64 16 38 H 0.07 -0.29 7.69 -51.93 -0.40 -0.69 16 39 H 0.09 0.11 7.34 -51.93 -0.38 -0.27 16 40 H 0.40 -2.23 8.58 -40.82 -0.35 -2.58 16 41 H 0.10 -0.52 7.66 -51.93 -0.40 -0.92 16 42 H 0.10 -0.50 7.66 -51.93 -0.40 -0.90 16 43 H 0.16 -0.90 6.30 -52.48 -0.33 -1.23 16 44 H 0.14 -0.61 4.86 -52.48 -0.25 -0.86 16 45 H 0.08 -0.36 7.96 -51.93 -0.41 -0.78 16 46 H 0.39 -2.29 8.74 45.56 0.40 -1.89 16 47 H 0.16 0.13 7.61 -52.49 -0.40 -0.27 16 48 H 0.06 -0.13 7.69 -51.93 -0.40 -0.53 16 49 H 0.07 0.13 7.92 -51.93 -0.41 -0.28 16 50 H 0.08 0.02 7.99 -51.93 -0.41 -0.39 16 51 H 0.08 -0.07 7.99 -51.93 -0.41 -0.48 16 LS Contribution 418.73 15.07 6.31 6.31 Total: 0.00 -12.06 418.73 -9.91 -21.98 By element: Atomic # 1 Polarization: -6.82 SS G_CDS: -7.10 Total: -13.92 kcal Atomic # 6 Polarization: 4.57 SS G_CDS: -0.52 Total: 4.05 kcal Atomic # 7 Polarization: 1.67 SS G_CDS: -0.12 Total: 1.54 kcal Atomic # 8 Polarization: -5.54 SS G_CDS: -2.24 Total: -7.78 kcal Atomic # 14 Polarization: -5.94 SS G_CDS: -6.24 Total: -12.19 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -12.06 -9.91 -21.98 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16807780_4549638.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.216 kcal (2) G-P(sol) polarization free energy of solvation -12.063 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.279 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.914 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.977 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.193 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds