Wall clock time and date at job start Sun Mar 7 2021 06:23:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37641 * 125.67537 * 2 1 4 4 C 1.46670 * 126.22652 * 359.97438 * 3 2 1 5 5 O 1.21700 * 120.00047 * 354.38108 * 4 3 2 6 6 N 1.34782 * 120.00152 * 174.66126 * 4 3 2 7 7 C 1.46497 * 119.99860 * 184.64425 * 6 4 3 8 8 C 1.52519 * 109.04567 * 277.14854 * 7 6 4 9 9 C 1.53716 * 109.64294 * 162.45215 * 8 7 6 10 10 Si 1.87382 * 107.28185 * 59.12684 * 9 8 7 11 11 C 1.86301 * 109.94365 * 195.09599 * 10 9 8 12 12 C 1.86303 * 110.01894 * 73.88456 * 10 9 8 13 13 C 1.87383 * 107.00602 * 314.46756 * 10 9 8 14 14 C 1.52522 * 109.03955 * 154.99772 * 7 6 4 15 15 C 1.37886 * 107.54556 * 179.73637 * 3 2 1 16 16 C 1.39872 * 107.09461 * 0.23607 * 15 3 2 17 17 Br 1.89104 * 126.07324 * 179.97438 * 16 15 3 18 18 C 1.35502 * 107.85302 * 0.02562 * 16 15 3 19 19 C 1.50698 * 125.57065 * 179.97438 * 18 16 15 20 20 O 1.42905 * 109.47257 * 304.52444 * 19 18 16 21 21 Si 1.86302 * 109.47138 * 64.52571 * 19 18 16 22 22 H 1.48501 * 109.46969 * 54.87900 * 21 19 18 23 23 H 1.48504 * 109.47196 * 174.87815 * 21 19 18 24 24 H 1.48496 * 109.47103 * 294.87836 * 21 19 18 25 25 H 1.09001 * 109.47544 * 94.63957 * 1 2 3 26 26 H 1.09000 * 109.47143 * 214.64486 * 1 2 3 27 27 H 1.09004 * 109.47066 * 334.64450 * 1 2 3 28 28 H 0.97003 * 119.99523 * 4.64256 * 6 4 3 29 29 H 1.08999 * 109.03033 * 36.03896 * 7 6 4 30 30 H 1.09002 * 109.44127 * 282.50448 * 8 7 6 31 31 H 1.09003 * 109.44484 * 42.39899 * 8 7 6 32 32 H 1.08995 * 109.89284 * 299.67868 * 9 8 7 33 33 H 1.09005 * 109.88977 * 178.56643 * 9 8 7 34 34 H 1.09006 * 109.47038 * 177.56170 * 11 10 9 35 35 H 1.09000 * 109.46869 * 297.56447 * 11 10 9 36 36 H 1.09004 * 109.47176 * 57.56213 * 11 10 9 37 37 H 1.08996 * 109.46943 * 302.39299 * 12 10 9 38 38 H 1.09003 * 109.46647 * 62.39403 * 12 10 9 39 39 H 1.08995 * 109.46986 * 182.39397 * 12 10 9 40 40 H 1.08993 * 109.89308 * 286.08883 * 13 10 9 41 41 H 1.09002 * 109.95288 * 165.00841 * 13 10 9 42 42 H 1.08994 * 109.44678 * 317.60327 * 14 7 6 43 43 H 1.09002 * 109.44795 * 77.50133 * 14 7 6 44 44 H 1.08010 * 126.45037 * 180.26345 * 15 3 2 45 45 H 1.09001 * 109.46922 * 184.52351 * 19 18 16 46 46 H 0.96702 * 113.99418 * 60.00295 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 -0.0005 5 8 0.6261 2.7648 -0.1042 6 7 2.7073 3.5139 0.1081 7 6 2.2462 4.9006 0.2101 8 6 1.9599 5.4341 -1.1898 9 6 1.0802 6.6910 -1.0939 10 14 2.0164 7.9487 -0.0678 11 6 0.8638 9.3055 0.4812 12 6 3.4166 8.6690 -1.0635 13 6 2.6941 7.0424 1.4257 14 6 3.3119 5.7284 0.9209 15 6 3.5781 0.6891 0.0060 16 6 3.5528 -0.7094 0.0042 17 35 5.0609 -1.8503 0.0097 18 6 2.2558 -1.1015 -0.0034 19 6 1.7713 -2.5285 -0.0083 20 8 2.3472 -3.2232 -1.1164 21 14 2.2786 -3.3620 1.5787 22 1 1.7840 -2.5703 2.7337 23 1 1.6965 -4.7273 1.6288 24 1 3.7596 -3.4528 1.6388 25 1 -0.3634 -0.0831 -1.0243 26 1 -0.3633 -0.8454 0.5842 27 1 -0.3633 0.9287 0.4401 28 1 3.6570 3.3165 0.1189 29 1 1.3266 4.9273 0.7946 30 1 2.8997 5.6856 -1.6814 31 1 1.4405 4.6711 -1.7697 32 1 0.1352 6.4462 -0.6091 33 1 0.8941 7.0904 -2.0909 34 1 1.4059 10.0094 1.1129 35 1 0.4744 9.8273 -0.3930 36 1 0.0368 8.8738 1.0450 37 1 4.0745 7.8670 -1.3982 38 1 3.0139 9.1941 -1.9297 39 1 3.9806 9.3673 -0.4451 40 1 1.8876 6.8278 2.1267 41 1 3.4579 7.6481 1.9134 42 1 3.7055 5.1643 1.7663 43 1 4.1214 5.9517 0.2259 44 1 4.4583 1.3150 0.0117 45 1 0.6849 -2.5430 -0.0952 46 1 3.3138 -3.2501 -1.1044 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16807780_5000100.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:23:09 Heat of formation + Delta-G solvation = -67.964278 kcal Electronic energy + Delta-G solvation = -26197.743552 eV Core-core repulsion = 22485.379474 eV Total energy + Delta-G solvation = -3712.364078 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 388.073 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.84089 -40.60615 -38.05197 -37.67199 -34.79834 -33.87593 -32.12956 -32.05710 -30.95810 -29.33981 -28.49945 -27.66615 -27.39356 -25.86549 -23.61095 -23.25157 -21.68793 -21.29231 -20.44727 -19.02609 -18.27736 -17.32177 -17.21084 -16.69367 -16.19356 -16.05135 -15.79398 -15.44607 -15.04476 -14.93814 -14.64571 -14.38758 -14.26249 -14.11318 -14.03127 -13.91867 -13.85372 -13.46822 -13.41287 -13.30774 -13.25426 -13.16205 -13.01739 -12.78022 -12.69681 -12.58249 -12.22929 -12.21223 -11.85390 -11.74067 -11.13754 -10.88609 -10.84975 -10.76105 -10.54853 -10.35814 -10.07048 -9.79280 -9.23959 0.19505 0.54678 0.84697 1.18061 1.40595 1.46193 1.57699 1.67863 1.80003 1.83566 1.92243 2.24514 2.28282 2.55216 3.17733 3.43228 3.54757 3.66330 3.71310 3.85245 3.98748 4.12132 4.13989 4.28412 4.29640 4.40619 4.42960 4.53999 4.57618 4.64996 4.67898 4.71369 4.71607 4.71913 4.73373 4.81360 5.02765 5.13940 5.23460 5.26723 5.29117 5.37453 5.42728 5.49921 5.54273 5.61086 5.81425 6.31195 6.40366 7.10582 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.386 5.386 3 C -0.036 4.036 4 C 0.592 3.408 5 O -0.539 6.539 6 N -0.715 5.715 7 C 0.141 3.859 8 C -0.117 4.117 9 C -0.403 4.403 10 Si 0.990 3.010 11 C -0.448 4.448 12 C -0.445 4.445 13 C -0.402 4.402 14 C -0.117 4.117 15 C -0.105 4.105 16 C -0.178 4.178 17 Br -0.018 7.018 18 C 0.056 3.944 19 C -0.063 4.063 20 O -0.528 6.528 21 Si 0.927 3.073 22 H -0.246 1.246 23 H -0.239 1.239 24 H -0.216 1.216 25 H 0.086 0.914 26 H 0.087 0.913 27 H 0.113 0.887 28 H 0.403 0.597 29 H 0.091 0.909 30 H 0.065 0.935 31 H 0.069 0.931 32 H 0.078 0.922 33 H 0.077 0.923 34 H 0.069 0.931 35 H 0.069 0.931 36 H 0.069 0.931 37 H 0.069 0.931 38 H 0.069 0.931 39 H 0.069 0.931 40 H 0.078 0.922 41 H 0.081 0.919 42 H 0.072 0.928 43 H 0.072 0.928 44 H 0.157 0.843 45 H 0.121 0.879 46 H 0.377 0.623 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.549 1.852 1.570 2.880 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.059 5.059 3 C -0.150 4.150 4 C 0.379 3.621 5 O -0.418 6.418 6 N -0.365 5.365 7 C 0.037 3.963 8 C -0.156 4.156 9 C -0.489 4.489 10 Si 1.186 2.814 11 C -0.556 4.556 12 C -0.553 4.553 13 C -0.488 4.488 14 C -0.155 4.155 15 C -0.132 4.132 16 C -0.264 4.264 17 Br 0.066 6.934 18 C -0.066 4.066 19 C -0.173 4.173 20 O -0.334 6.334 21 Si 0.743 3.257 22 H -0.170 1.170 23 H -0.161 1.161 24 H -0.137 1.137 25 H 0.105 0.895 26 H 0.105 0.895 27 H 0.131 0.869 28 H 0.238 0.762 29 H 0.109 0.891 30 H 0.084 0.916 31 H 0.087 0.913 32 H 0.097 0.903 33 H 0.096 0.904 34 H 0.088 0.912 35 H 0.088 0.912 36 H 0.088 0.912 37 H 0.088 0.912 38 H 0.088 0.912 39 H 0.088 0.912 40 H 0.097 0.903 41 H 0.100 0.900 42 H 0.090 0.910 43 H 0.090 0.910 44 H 0.175 0.825 45 H 0.139 0.861 46 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges 0.474 1.168 2.118 2.465 hybrid contribution 0.511 0.495 -0.430 0.831 sum 0.985 1.663 1.688 2.566 Atomic orbital electron populations 1.22490 0.74882 1.06190 1.04756 1.43754 1.07209 1.03844 1.51140 1.20068 0.89719 0.87907 1.17313 1.16824 0.85747 0.83123 0.76362 1.90817 1.16208 1.84610 1.50127 1.45795 1.09796 1.06190 1.74741 1.21102 0.98865 0.79131 0.97206 1.21567 1.00065 0.97881 0.96060 1.26236 1.05904 1.07155 1.09588 0.79677 0.67426 0.67003 0.67257 1.26076 1.10615 1.12994 1.05871 1.26087 1.13426 1.06784 1.09030 1.26205 1.06097 1.02875 1.13651 1.21471 0.97499 0.96139 1.00362 1.21172 0.95244 0.92807 1.04005 1.20678 0.90927 0.94687 1.20090 1.96651 1.36569 1.62089 1.98072 1.20880 0.89534 0.90123 1.06052 1.24721 1.02688 0.87508 1.02391 1.86548 1.26196 1.75276 1.45408 0.85954 0.84495 0.80878 0.74342 1.16951 1.16135 1.13732 0.89541 0.89455 0.86874 0.76215 0.89096 0.91606 0.91256 0.90340 0.90416 0.91225 0.91195 0.91163 0.91222 0.91204 0.91218 0.90276 0.90028 0.90986 0.90961 0.82544 0.86145 0.77315 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.02 10.15 59.85 0.61 0.59 16 2 N -0.39 -0.62 3.16 -115.59 -0.37 -0.99 16 3 C -0.04 -0.06 6.88 -81.98 -0.56 -0.63 16 4 C 0.59 1.23 7.53 -12.85 -0.10 1.13 16 5 O -0.54 -2.55 14.10 5.19 0.07 -2.48 16 6 N -0.71 0.44 5.03 -55.60 -0.28 0.16 16 7 C 0.14 -0.11 2.01 -68.42 -0.14 -0.24 16 8 C -0.12 0.05 5.15 -26.61 -0.14 -0.09 16 9 C -0.40 0.45 4.98 37.53 0.19 0.64 16 10 Si 0.99 -2.95 11.60 -169.99 -1.97 -4.92 16 11 C -0.45 0.73 8.65 101.05 0.87 1.60 16 12 C -0.45 0.93 8.65 101.05 0.87 1.81 16 13 C -0.40 1.03 4.98 37.53 0.19 1.22 16 14 C -0.12 0.29 5.05 -26.60 -0.13 0.15 16 15 C -0.11 -0.06 10.34 -39.10 -0.40 -0.46 16 16 C -0.18 -0.25 6.08 -39.95 -0.24 -0.49 16 17 Br -0.02 -0.01 28.87 -68.01 -1.96 -1.97 16 18 C 0.06 0.08 5.32 -81.91 -0.44 -0.35 16 19 C -0.06 -0.02 2.80 36.00 0.10 0.08 16 20 O -0.53 -0.87 12.88 -35.23 -0.45 -1.32 16 21 Si 0.93 -0.06 26.76 -169.99 -4.55 -4.60 16 22 H -0.25 -0.19 7.11 56.52 0.40 0.22 16 23 H -0.24 -0.12 7.11 56.52 0.40 0.28 16 24 H -0.22 0.02 5.74 56.52 0.32 0.34 16 25 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.09 -0.25 7.30 -51.93 -0.38 -0.62 16 27 H 0.11 0.08 6.19 -51.93 -0.32 -0.24 16 28 H 0.40 -1.21 7.48 -40.82 -0.31 -1.52 16 29 H 0.09 0.07 7.42 -51.93 -0.39 -0.31 16 30 H 0.07 -0.10 7.69 -51.93 -0.40 -0.50 16 31 H 0.07 0.14 7.69 -51.93 -0.40 -0.26 16 32 H 0.08 -0.03 7.99 -51.93 -0.41 -0.44 16 33 H 0.08 -0.09 7.99 -51.93 -0.41 -0.50 16 34 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 35 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 36 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 37 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 38 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 39 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 40 H 0.08 -0.17 7.99 -51.93 -0.41 -0.59 16 41 H 0.08 -0.24 7.99 -51.93 -0.41 -0.65 16 42 H 0.07 -0.18 8.13 -51.93 -0.42 -0.60 16 43 H 0.07 -0.25 7.69 -51.93 -0.40 -0.65 16 44 H 0.16 -0.34 7.45 -52.48 -0.39 -0.73 16 45 H 0.12 -0.17 6.67 -51.93 -0.35 -0.52 16 46 H 0.38 0.09 6.17 45.56 0.28 0.37 16 LS Contribution 378.68 15.07 5.71 5.71 Total: 0.00 -6.08 378.68 -10.03 -16.11 By element: Atomic # 1 Polarization: -3.74 SS G_CDS: -6.90 Total: -10.64 kcal Atomic # 6 Polarization: 4.27 SS G_CDS: 0.68 Total: 4.95 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.65 Total: -0.83 kcal Atomic # 8 Polarization: -3.42 SS G_CDS: -0.38 Total: -3.80 kcal Atomic # 14 Polarization: -3.01 SS G_CDS: -6.52 Total: -9.53 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -1.96 Total: -1.97 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -6.08 -10.03 -16.11 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16807780_5000100.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.854 kcal (2) G-P(sol) polarization free energy of solvation -6.082 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.936 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.110 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.964 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds