Wall clock time and date at job start Sun Mar 7 2021 10:17:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34231 * 116.99846 * 2 1 4 4 O 1.20830 * 120.00161 * 359.97438 * 3 2 1 5 5 C 1.50707 * 120.00048 * 180.02562 * 3 2 1 6 6 C 1.52999 * 109.47092 * 179.97438 * 5 3 2 7 7 H 1.08999 * 109.46905 * 54.99820 * 6 5 3 8 8 C 1.52995 * 109.47111 * 174.99803 * 6 5 3 9 9 C 1.52999 * 109.47111 * 179.97438 * 8 6 5 10 10 C 1.52995 * 109.47089 * 299.99857 * 9 8 6 11 11 H 1.08999 * 109.47378 * 299.99871 * 10 9 8 12 12 C 1.52999 * 109.47089 * 180.02562 * 10 9 8 13 13 N 1.46505 * 109.47014 * 175.00028 * 12 10 9 14 14 C 1.34778 * 119.99539 * 180.02562 * 13 12 10 15 15 O 1.21273 * 120.00538 * 359.97438 * 14 13 12 16 16 C 1.50701 * 119.99568 * 180.02562 * 14 13 12 17 17 C 1.50702 * 109.47213 * 180.02562 * 16 14 13 18 18 C 1.38234 * 120.00257 * 89.99642 * 17 16 14 19 19 C 1.38230 * 119.99864 * 179.97438 * 18 17 16 20 20 C 1.38235 * 120.00326 * 0.02562 * 19 18 17 21 21 C 1.50702 * 120.00236 * 179.70551 * 20 19 18 22 22 O 1.42904 * 109.46864 * 299.99602 * 21 20 19 23 23 Si 1.86305 * 109.47004 * 180.02562 * 21 20 19 24 24 C 1.38234 * 119.99814 * 359.97438 * 20 19 18 25 25 C 1.38235 * 119.99519 * 269.97572 * 17 16 14 26 26 C 1.52995 * 109.47027 * 60.00091 * 10 9 8 27 27 C 1.52995 * 109.47407 * 300.00043 * 26 10 9 28 28 H 1.08992 * 109.47073 * 60.00186 * 1 2 3 29 29 H 1.09003 * 109.46908 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47107 * 299.99904 * 1 2 3 31 31 H 1.08996 * 109.47028 * 59.99735 * 5 3 2 32 32 H 1.09007 * 109.46754 * 299.99746 * 5 3 2 33 33 H 1.08998 * 109.46840 * 59.99831 * 8 6 5 34 34 H 1.09005 * 109.47385 * 299.99907 * 8 6 5 35 35 H 1.09000 * 109.46853 * 179.97438 * 9 8 6 36 36 H 1.08998 * 109.47407 * 60.00178 * 9 8 6 37 37 H 1.09000 * 109.47078 * 55.00593 * 12 10 9 38 38 H 1.09001 * 109.47591 * 295.00234 * 12 10 9 39 39 H 0.96997 * 120.00105 * 0.02562 * 13 12 10 40 40 H 1.08999 * 109.47440 * 59.99322 * 16 14 13 41 41 H 1.09003 * 109.46969 * 299.99572 * 16 14 13 42 42 H 1.08002 * 119.99744 * 359.97438 * 18 17 16 43 43 H 1.08000 * 120.00356 * 179.97438 * 19 18 17 44 44 H 1.08993 * 109.47357 * 59.99629 * 21 20 19 45 45 H 0.96696 * 114.00191 * 180.02562 * 22 21 20 46 46 H 1.48500 * 109.99858 * 298.67347 * 23 21 20 47 47 H 1.48493 * 110.00109 * 59.99608 * 23 21 20 48 48 H 1.08001 * 120.00279 * 180.02562 * 24 20 19 49 49 H 1.08005 * 120.00223 * 359.97438 * 25 17 16 50 50 H 1.09008 * 109.47389 * 59.99929 * 26 10 9 51 51 H 1.09005 * 109.47385 * 179.97438 * 26 10 9 52 52 H 1.09007 * 109.47254 * 300.00115 * 27 26 10 53 53 H 1.09007 * 109.47502 * 180.02562 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5664 1.2749 -0.0006 6 6 4.0001 2.7422 -0.0011 7 1 3.5382 3.2579 0.8407 8 6 5.5228 2.8239 0.1241 9 6 5.9566 4.2911 0.1229 10 6 5.5162 4.9521 -1.1847 11 1 5.9782 4.4360 -2.0263 12 6 5.9505 6.4191 -1.1862 13 7 5.6356 7.0204 -2.4845 14 6 5.9314 8.3145 -2.7172 15 8 6.4578 8.9814 -1.8519 16 6 5.6068 8.9332 -4.0525 17 6 6.0359 10.3778 -4.0545 18 6 7.3106 10.7198 -4.4658 19 6 7.7039 12.0449 -4.4681 20 6 6.8228 13.0282 -4.0585 21 6 7.2538 14.4722 -4.0546 22 8 8.3771 14.6317 -3.1858 23 14 5.8487 15.5381 -3.4539 24 6 5.5481 12.6863 -3.6471 25 6 5.1546 11.3611 -3.6453 26 6 3.9936 4.8704 -1.3099 27 6 3.5597 3.4032 -1.3087 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 3.9558 0.7810 -0.8908 32 1 3.9565 0.7807 0.8892 33 1 5.9847 2.3081 -0.7178 34 1 5.8366 2.3526 1.0555 35 1 7.0413 4.3493 0.2126 36 1 5.4947 4.8073 0.9645 37 1 7.0242 6.4803 -1.0084 38 1 5.4208 6.9558 -0.3991 39 1 5.2141 6.4871 -3.1765 40 1 4.5331 8.8724 -4.2299 41 1 6.1360 8.3964 -4.8399 42 1 7.9991 9.9515 -4.7854 43 1 8.6999 12.3121 -4.7890 44 1 7.5309 14.7714 -5.0654 45 1 8.7085 15.5386 -3.1338 46 1 4.6848 15.4058 -4.3666 47 1 5.4621 15.1399 -2.0766 48 1 4.8595 13.4544 -3.3275 49 1 4.1584 11.0940 -3.3246 50 1 3.5315 5.3865 -0.4683 51 1 3.6797 5.3417 -2.2413 52 1 4.0217 2.8870 -2.1503 53 1 2.4749 3.3450 -1.3984 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16902906_12335836.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:17:45 Heat of formation + Delta-G solvation = -148.786114 kcal Electronic energy + Delta-G solvation = -31639.655939 eV Core-core repulsion = 27248.808277 eV Total energy + Delta-G solvation = -4390.847662 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.197 amu Computer time = 1.85 seconds Orbital eigenvalues (eV) -41.69509 -41.27866 -40.35929 -39.61406 -37.69990 -37.57159 -36.15691 -34.31855 -33.64134 -32.10568 -31.68332 -30.61534 -29.56792 -28.14814 -26.18811 -25.06598 -23.99896 -23.76599 -22.57809 -22.09111 -21.49382 -21.18974 -20.67535 -18.59590 -18.42231 -18.20043 -17.78441 -17.62014 -17.48126 -17.10455 -16.85113 -16.45947 -16.29286 -15.96225 -15.34179 -15.27069 -15.11936 -15.02427 -14.91635 -14.79264 -14.50138 -14.38618 -14.27280 -13.88128 -13.78320 -13.51773 -13.43993 -13.17234 -13.07408 -12.99153 -12.93737 -12.68547 -12.54500 -12.36731 -12.10171 -12.04478 -11.89757 -11.86306 -11.79701 -11.66558 -11.44001 -11.21607 -10.98306 -10.83898 -10.37542 -10.14724 -10.03887 -9.69554 -5.00286 0.09283 0.28690 1.16660 1.26349 1.57899 1.58205 1.78306 1.94211 2.12151 2.65209 3.39097 3.51640 3.54445 3.65287 3.70136 3.72619 3.80028 3.84072 3.93206 3.95759 3.99442 4.14340 4.21272 4.23320 4.26905 4.29393 4.31106 4.43570 4.44897 4.49869 4.51484 4.51931 4.58058 4.59977 4.63410 4.66376 4.67352 4.77207 4.81441 4.89294 4.93678 4.96461 5.10006 5.15538 5.21512 5.22956 5.24083 5.30816 5.37706 5.39007 5.41196 5.44002 5.52573 5.58450 5.87040 6.50019 6.71758 6.88102 7.21458 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.369 6.369 3 C 0.454 3.546 4 O -0.537 6.537 5 C -0.108 4.108 6 C -0.075 4.075 7 H 0.059 0.941 8 C -0.106 4.106 9 C -0.114 4.114 10 C -0.085 4.085 11 H 0.096 0.904 12 C 0.125 3.875 13 N -0.716 5.716 14 C 0.510 3.490 15 O -0.585 6.585 16 C -0.097 4.097 17 C -0.072 4.072 18 C -0.110 4.110 19 C -0.101 4.101 20 C -0.097 4.097 21 C -0.079 4.079 22 O -0.566 6.566 23 Si 0.777 3.223 24 C -0.147 4.147 25 C -0.113 4.113 26 C -0.109 4.109 27 C -0.119 4.119 28 H 0.060 0.940 29 H 0.126 0.874 30 H 0.058 0.942 31 H 0.128 0.872 32 H 0.125 0.875 33 H 0.082 0.918 34 H 0.076 0.924 35 H 0.074 0.926 36 H 0.054 0.946 37 H 0.058 0.942 38 H 0.046 0.954 39 H 0.417 0.583 40 H 0.130 0.870 41 H 0.137 0.863 42 H 0.144 0.856 43 H 0.137 0.863 44 H 0.098 0.902 45 H 0.403 0.597 46 H -0.285 1.285 47 H -0.307 1.307 48 H 0.112 0.888 49 H 0.134 0.866 50 H 0.045 0.955 51 H 0.069 0.931 52 H 0.076 0.924 53 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.915 -4.443 -4.918 6.690 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.286 6.286 3 C 0.299 3.701 4 O -0.427 6.427 5 C -0.145 4.145 6 C -0.094 4.094 7 H 0.077 0.923 8 C -0.143 4.143 9 C -0.152 4.152 10 C -0.104 4.104 11 H 0.114 0.886 12 C 0.001 3.999 13 N -0.369 5.369 14 C 0.297 3.703 15 O -0.465 6.465 16 C -0.136 4.136 17 C -0.072 4.072 18 C -0.128 4.128 19 C -0.119 4.119 20 C -0.097 4.097 21 C -0.189 4.189 22 O -0.376 6.376 23 Si 0.684 3.316 24 C -0.164 4.164 25 C -0.131 4.131 26 C -0.147 4.147 27 C -0.156 4.156 28 H 0.079 0.921 29 H 0.145 0.855 30 H 0.076 0.924 31 H 0.146 0.854 32 H 0.143 0.857 33 H 0.101 0.899 34 H 0.095 0.905 35 H 0.092 0.908 36 H 0.073 0.927 37 H 0.076 0.924 38 H 0.065 0.935 39 H 0.254 0.746 40 H 0.148 0.852 41 H 0.155 0.845 42 H 0.161 0.839 43 H 0.155 0.845 44 H 0.116 0.884 45 H 0.254 0.746 46 H -0.212 1.212 47 H -0.236 1.236 48 H 0.130 0.870 49 H 0.152 0.848 50 H 0.064 0.936 51 H 0.088 0.912 52 H 0.095 0.905 53 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 0.150 -4.310 -3.945 5.845 hybrid contribution -0.696 -0.395 0.012 0.801 sum -0.546 -4.705 -3.933 6.157 Atomic orbital electron populations 1.23465 0.75339 1.05408 1.02242 1.86517 1.24585 1.33643 1.83827 1.24547 0.93551 0.80823 0.71134 1.90655 1.68275 1.37169 1.46570 1.21647 0.85141 0.99797 1.07883 1.21003 0.96738 0.92865 0.98773 0.92275 1.21524 0.93081 0.96136 1.03571 1.21501 1.01388 0.95940 0.96348 1.21344 0.96059 0.92881 1.00105 0.88588 1.21370 0.99990 0.93741 0.84807 1.45925 1.62834 1.11014 1.17150 1.21024 0.77454 0.81945 0.89854 1.90752 1.44508 1.62737 1.48462 1.20764 1.06000 0.91645 0.95195 1.19598 0.94250 0.94933 0.98445 1.21360 0.95701 0.96676 0.99067 1.21179 0.99602 0.92463 0.98682 1.19736 0.94086 0.95696 1.00195 1.24836 0.98857 0.96676 0.98499 1.86456 1.48025 1.36117 1.66960 0.94607 0.74986 0.86294 0.75704 1.20972 0.96421 0.96991 1.02025 1.21136 1.00610 0.92199 0.99139 1.21528 0.94727 0.96651 1.01749 1.21685 1.01027 0.95582 0.97314 0.92135 0.85536 0.92357 0.85357 0.85665 0.89898 0.90537 0.90764 0.92680 0.92367 0.93537 0.74556 0.85223 0.84527 0.83864 0.84501 0.88444 0.74565 1.21233 1.23550 0.87030 0.84770 0.93595 0.91200 0.90539 0.92607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.80 10.57 -51.42 -0.54 -1.34 16 3 C 0.45 1.20 7.68 71.24 0.55 1.74 16 4 O -0.54 -4.84 13.72 21.95 0.30 -4.54 16 5 C -0.11 0.52 5.29 29.85 0.16 0.68 16 6 C -0.08 0.24 1.84 -10.80 -0.02 0.22 16 7 H 0.06 0.09 7.96 -2.39 -0.02 0.07 16 8 C -0.11 0.69 5.20 30.59 0.16 0.85 16 9 C -0.11 0.47 5.20 30.59 0.16 0.63 16 10 C -0.09 0.38 2.22 -10.80 -0.02 0.35 16 11 H 0.10 -0.70 8.14 -2.39 -0.02 -0.71 16 12 C 0.12 0.08 5.07 86.38 0.44 0.52 16 13 N -0.72 0.97 5.28 -463.05 -2.45 -1.47 16 14 C 0.51 2.43 7.82 87.66 0.69 3.11 16 15 O -0.58 -9.49 16.03 -3.01 -0.05 -9.54 16 16 C -0.10 0.16 5.83 29.10 0.17 0.33 16 17 C -0.07 -0.42 4.37 -19.87 -0.09 -0.51 16 18 C -0.11 -0.68 9.70 22.27 0.22 -0.46 16 19 C -0.10 -0.81 9.61 22.27 0.21 -0.60 16 20 C -0.10 -0.91 5.42 -19.87 -0.11 -1.01 16 21 C -0.08 -0.26 2.81 71.24 0.20 -0.06 16 22 O -0.57 -2.15 12.74 -148.98 -1.90 -4.05 16 23 Si 0.78 1.30 29.79 68.60 2.04 3.34 16 24 C -0.15 -1.54 8.67 22.27 0.19 -1.35 16 25 C -0.11 -0.95 9.70 22.27 0.22 -0.73 16 26 C -0.11 0.27 5.08 30.59 0.16 0.42 16 27 C -0.12 0.25 4.94 30.59 0.15 0.40 16 28 H 0.06 -0.04 8.13 -2.39 -0.02 -0.05 16 29 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 30 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 31 H 0.13 -1.15 8.14 -2.39 -0.02 -1.17 16 32 H 0.13 -1.03 8.14 -2.38 -0.02 -1.05 16 33 H 0.08 -0.74 8.14 -2.39 -0.02 -0.76 16 34 H 0.08 -0.57 8.14 -2.38 -0.02 -0.59 16 35 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 36 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 37 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 38 H 0.05 0.24 8.14 -2.39 -0.02 0.23 16 39 H 0.42 -3.36 7.65 -92.71 -0.71 -4.07 16 40 H 0.13 -0.86 8.09 -2.39 -0.02 -0.88 16 41 H 0.14 -1.07 8.08 -2.39 -0.02 -1.09 16 42 H 0.14 0.18 8.06 -2.91 -0.02 0.16 16 43 H 0.14 0.69 8.06 -2.91 -0.02 0.66 16 44 H 0.10 -0.17 7.96 -2.39 -0.02 -0.19 16 45 H 0.40 -3.01 8.74 -74.06 -0.65 -3.66 16 46 H -0.28 -1.77 7.11 99.48 0.71 -1.06 16 47 H -0.31 -3.31 7.11 99.48 0.71 -2.60 16 48 H 0.11 1.11 4.88 -2.91 -0.01 1.09 16 49 H 0.13 0.63 8.06 -2.91 -0.02 0.60 16 50 H 0.05 0.09 8.14 -2.38 -0.02 0.07 16 51 H 0.07 -0.30 7.18 -2.38 -0.02 -0.32 16 52 H 0.08 -0.41 8.14 -2.38 -0.02 -0.43 16 53 H 0.06 0.19 5.96 -2.38 -0.01 0.18 16 Total: 0.00 -30.28 424.02 1.62 -28.66 By element: Atomic # 1 Polarization: -16.35 SS G_CDS: -0.41 Total: -16.75 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: 4.62 Total: 5.71 kcal Atomic # 7 Polarization: 0.97 SS G_CDS: -2.45 Total: -1.47 kcal Atomic # 8 Polarization: -17.29 SS G_CDS: -2.19 Total: -19.48 kcal Atomic # 14 Polarization: 1.30 SS G_CDS: 2.04 Total: 3.34 kcal Total: -30.28 1.62 -28.66 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16902906_12335836.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.130 kcal (2) G-P(sol) polarization free energy of solvation -30.277 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.620 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.656 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.786 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.85 seconds