Wall clock time and date at job start Sun Mar 7 2021 10:18:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34228 * 117.00257 * 2 1 4 4 O 1.20822 * 119.99565 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00228 * 179.97438 * 3 2 1 6 6 C 1.52992 * 109.47246 * 180.02562 * 5 3 2 7 7 H 1.08998 * 109.47037 * 55.00424 * 6 5 3 8 8 C 1.53001 * 109.47069 * 175.00411 * 6 5 3 9 9 C 1.53004 * 109.47190 * 180.02562 * 8 6 5 10 10 C 1.53005 * 109.46867 * 300.00145 * 9 8 6 11 11 H 1.09006 * 109.46761 * 299.99551 * 10 9 8 12 12 C 1.52994 * 109.46796 * 179.97438 * 10 9 8 13 13 N 1.46508 * 109.47041 * 174.99547 * 12 10 9 14 14 C 1.34778 * 120.00123 * 179.97438 * 13 12 10 15 15 O 1.21571 * 119.99927 * 0.02562 * 14 13 12 16 16 C 1.47692 * 120.00052 * 180.02562 * 14 13 12 17 17 C 1.39799 * 120.15434 * 180.22951 * 16 14 13 18 18 F 1.35097 * 120.09084 * 359.97438 * 17 16 14 19 19 C 1.38322 * 119.83132 * 180.27860 * 17 16 14 20 20 C 1.38189 * 120.13989 * 359.74132 * 19 17 16 21 21 C 1.50699 * 119.83620 * 180.02562 * 20 19 17 22 22 O 1.42906 * 109.47307 * 254.98077 * 21 20 19 23 23 Si 1.86295 * 109.47364 * 14.98066 * 21 20 19 24 24 C 1.38652 * 120.31905 * 0.02562 * 20 19 17 25 25 F 1.35101 * 119.91825 * 179.97438 * 24 20 19 26 26 C 1.38072 * 120.16531 * 359.97438 * 24 20 19 27 27 C 1.52993 * 109.47414 * 59.99757 * 10 9 8 28 28 C 1.52996 * 109.47365 * 295.00302 * 6 5 3 29 29 H 1.09004 * 109.46758 * 59.99841 * 1 2 3 30 30 H 1.09005 * 109.47406 * 179.97438 * 1 2 3 31 31 H 1.08990 * 109.47125 * 299.99543 * 1 2 3 32 32 H 1.09005 * 109.46550 * 60.00453 * 5 3 2 33 33 H 1.08997 * 109.47453 * 300.00983 * 5 3 2 34 34 H 1.08998 * 109.47181 * 60.00101 * 8 6 5 35 35 H 1.09002 * 109.47147 * 299.99633 * 8 6 5 36 36 H 1.09000 * 109.47109 * 180.02562 * 9 8 6 37 37 H 1.08998 * 109.47209 * 59.99833 * 9 8 6 38 38 H 1.09005 * 109.47423 * 54.99855 * 12 10 9 39 39 H 1.08994 * 109.47326 * 294.99641 * 12 10 9 40 40 H 0.96996 * 119.99808 * 0.02562 * 13 12 10 41 41 H 1.07993 * 119.93017 * 179.72237 * 19 17 16 42 42 H 1.09002 * 109.46967 * 134.98236 * 21 20 19 43 43 H 0.96700 * 113.99746 * 60.00229 * 22 21 20 44 44 H 1.48508 * 110.00159 * 179.97438 * 23 21 20 45 45 H 1.48494 * 110.00236 * 301.31701 * 23 21 20 46 46 H 1.08002 * 120.07124 * 179.97438 * 26 24 20 47 47 H 1.09012 * 109.46962 * 59.99911 * 27 10 9 48 48 H 1.08994 * 109.47598 * 179.97438 * 27 10 9 49 49 H 1.08998 * 109.47143 * 300.00057 * 28 6 5 50 50 H 1.09004 * 109.47204 * 59.99937 * 28 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2092 0.0005 5 6 3.5664 1.2748 0.0006 6 6 4.0002 2.7419 0.0011 7 1 3.5377 3.2573 0.8429 8 6 5.5228 2.8235 0.1273 9 6 5.9566 4.2907 0.1285 10 6 5.5169 4.9536 -1.1786 11 1 5.9795 4.4386 -2.0206 12 6 5.9502 6.4209 -1.1771 13 7 5.6361 7.0241 -2.4748 14 6 5.9302 8.3191 -2.7048 15 8 6.4565 8.9866 -1.8357 16 6 5.6130 8.9274 -4.0128 17 6 5.9210 10.2690 -4.2565 18 9 6.5097 11.0142 -3.2957 19 6 5.6157 10.8334 -5.4819 20 6 5.0127 10.0726 -6.4654 21 6 4.6837 10.6944 -7.7981 22 8 3.2769 10.9325 -7.8784 23 14 5.5977 12.3083 -7.9731 24 6 4.7090 8.7401 -6.2318 25 9 4.1190 8.0040 -7.1988 26 6 5.0080 8.1636 -5.0133 27 6 3.9944 4.8720 -1.3048 28 6 3.5607 3.4042 -1.3062 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 -0.3633 0.5137 0.8899 32 1 3.9564 0.7805 -0.8893 33 1 3.9558 0.7808 0.8907 34 1 5.9853 2.3082 -0.7145 35 1 5.8360 2.3517 1.0587 36 1 7.0414 4.3488 0.2179 37 1 5.4942 4.8057 0.9705 38 1 7.0237 6.4827 -0.9981 39 1 5.4192 6.9557 -0.3898 40 1 5.2158 6.4916 -3.1681 41 1 5.8489 11.8709 -5.6704 42 1 4.9839 10.0181 -8.5985 43 1 2.9391 11.5274 -7.1949 44 1 5.2821 12.9312 -9.2838 45 1 5.2209 13.2276 -6.8695 46 1 4.7704 7.1256 -4.8329 47 1 3.5319 5.3870 -0.4627 48 1 3.6811 5.3446 -2.2357 49 1 4.0231 2.8889 -2.1480 50 1 2.4759 3.3462 -1.3961 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16902906_12360598.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:18:31 Heat of formation + Delta-G solvation = -224.455889 kcal Electronic energy + Delta-G solvation = -35435.356630 eV Core-core repulsion = 30257.857348 eV Total energy + Delta-G solvation = -5177.499282 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.163 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -50.12523 -50.11196 -41.69366 -41.39287 -40.16373 -39.56797 -37.80142 -37.59893 -36.26821 -34.11557 -33.07516 -31.65238 -31.39840 -30.19015 -28.49253 -27.64306 -25.71835 -24.43134 -23.87417 -23.54599 -22.45163 -21.84936 -21.31151 -20.71402 -19.73125 -18.88186 -18.66445 -18.55940 -17.97970 -17.61361 -17.47182 -17.38678 -17.02771 -16.77877 -16.62944 -16.42005 -16.24013 -15.93417 -15.90118 -15.62114 -15.32749 -15.18829 -15.09670 -14.97129 -14.63920 -14.40370 -14.26127 -14.14886 -13.84452 -13.73198 -13.40347 -13.19761 -13.05275 -13.00508 -12.93299 -12.68316 -12.53462 -12.42599 -12.01797 -11.93808 -11.87803 -11.78189 -11.65004 -11.42958 -11.33479 -11.03225 -10.82520 -10.79258 -10.63148 -10.23276 -9.83956 -4.96704 -0.83148 -0.32957 1.15014 1.18305 1.37169 1.53615 1.79909 1.86231 1.90692 2.22375 2.77057 2.83174 3.09213 3.22768 3.42973 3.50757 3.53500 3.67758 3.74114 3.77468 3.85124 3.97896 4.14168 4.15954 4.24118 4.27767 4.30471 4.30698 4.36893 4.47288 4.50555 4.53762 4.54216 4.62292 4.66021 4.67314 4.67949 4.68841 4.70699 4.79361 4.83130 4.98749 5.11546 5.17884 5.19496 5.27398 5.30070 5.35340 5.36923 5.40483 5.54732 5.60946 6.28553 6.37340 6.73262 6.96707 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.370 6.370 3 C 0.454 3.546 4 O -0.537 6.537 5 C -0.108 4.108 6 C -0.075 4.075 7 H 0.060 0.940 8 C -0.106 4.106 9 C -0.112 4.112 10 C -0.087 4.087 11 H 0.097 0.903 12 C 0.124 3.876 13 N -0.705 5.705 14 C 0.555 3.445 15 O -0.563 6.563 16 C -0.147 4.147 17 C 0.140 3.860 18 F -0.124 7.124 19 C -0.130 4.130 20 C -0.090 4.090 21 C -0.087 4.087 22 O -0.540 6.540 23 Si 0.773 3.227 24 C 0.105 3.895 25 F -0.127 7.127 26 C -0.078 4.078 27 C -0.111 4.111 28 C -0.120 4.120 29 H 0.059 0.941 30 H 0.126 0.874 31 H 0.058 0.942 32 H 0.128 0.872 33 H 0.125 0.875 34 H 0.082 0.918 35 H 0.076 0.924 36 H 0.077 0.923 37 H 0.057 0.943 38 H 0.069 0.931 39 H 0.056 0.944 40 H 0.414 0.586 41 H 0.172 0.828 42 H 0.133 0.867 43 H 0.390 0.610 44 H -0.293 1.293 45 H -0.271 1.271 46 H 0.179 0.821 47 H 0.049 0.951 48 H 0.067 0.933 49 H 0.076 0.924 50 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.449 -6.418 -2.108 7.186 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.286 6.286 3 C 0.299 3.701 4 O -0.427 6.427 5 C -0.145 4.145 6 C -0.094 4.094 7 H 0.078 0.922 8 C -0.144 4.144 9 C -0.150 4.150 10 C -0.106 4.106 11 H 0.115 0.885 12 C 0.000 4.000 13 N -0.358 5.358 14 C 0.342 3.658 15 O -0.443 6.443 16 C -0.152 4.152 17 C 0.119 3.881 18 F -0.103 7.103 19 C -0.148 4.148 20 C -0.092 4.092 21 C -0.196 4.196 22 O -0.348 6.348 23 Si 0.677 3.323 24 C 0.085 3.915 25 F -0.105 7.105 26 C -0.097 4.097 27 C -0.149 4.149 28 C -0.157 4.157 29 H 0.078 0.922 30 H 0.144 0.856 31 H 0.077 0.923 32 H 0.146 0.854 33 H 0.143 0.857 34 H 0.101 0.899 35 H 0.095 0.905 36 H 0.095 0.905 37 H 0.076 0.924 38 H 0.087 0.913 39 H 0.075 0.925 40 H 0.253 0.747 41 H 0.189 0.811 42 H 0.151 0.849 43 H 0.240 0.760 44 H -0.221 1.221 45 H -0.197 1.197 46 H 0.196 0.804 47 H 0.068 0.932 48 H 0.086 0.914 49 H 0.094 0.906 50 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 2.568 -5.252 -2.068 6.202 hybrid contribution -1.932 0.160 0.412 1.982 sum 0.636 -5.093 -1.657 5.393 Atomic orbital electron populations 1.23460 0.75372 1.05387 1.02228 1.86516 1.24556 1.33701 1.83835 1.24563 0.93586 0.80807 0.71135 1.90653 1.68279 1.37165 1.46563 1.21652 0.85075 0.99920 1.07855 1.21007 0.96851 0.92756 0.98756 0.92164 1.21530 0.92962 0.96299 1.03578 1.21496 1.01583 0.95764 0.96203 1.21379 0.95990 0.92816 1.00418 0.88479 1.21521 1.00820 0.93724 0.83892 1.45806 1.62116 1.10144 1.17731 1.18081 0.78605 0.82657 0.86478 1.90870 1.44036 1.62604 1.46762 1.19832 1.06000 0.93598 0.95730 1.17800 0.95250 0.88448 0.86599 1.91602 1.80675 1.75647 1.62329 1.21110 1.00644 1.02400 0.90631 1.20448 0.98276 0.92775 0.97706 1.25324 0.87208 1.11805 0.95225 1.86656 1.20661 1.70060 1.57465 0.93825 0.88444 0.72791 0.77270 1.17339 0.98172 0.89331 0.86665 1.91573 1.81160 1.76299 1.61514 1.21330 0.96502 1.01868 0.90012 1.21564 0.94867 0.96658 1.01797 1.21697 1.01013 0.95611 0.97376 0.92184 0.85569 0.92333 0.85419 0.85665 0.89941 0.90512 0.90465 0.92388 0.91313 0.92523 0.74734 0.81107 0.84894 0.76041 1.22061 1.19734 0.80410 0.93244 0.91440 0.90563 0.92691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.70 10.57 -51.39 -0.54 -1.24 16 3 C 0.45 1.00 7.67 71.23 0.55 1.55 16 4 O -0.54 -4.60 13.72 21.98 0.30 -4.30 16 5 C -0.11 0.59 5.29 29.84 0.16 0.75 16 6 C -0.08 0.31 1.84 -10.80 -0.02 0.29 16 7 H 0.06 0.03 7.95 -2.39 -0.02 0.01 16 8 C -0.11 0.83 5.20 30.60 0.16 0.99 16 9 C -0.11 0.68 5.20 30.60 0.16 0.84 16 10 C -0.09 0.53 2.23 -10.80 -0.02 0.51 16 11 H 0.10 -0.87 8.14 -2.38 -0.02 -0.89 16 12 C 0.12 -0.19 5.06 86.38 0.44 0.25 16 13 N -0.71 1.33 5.23 -466.11 -2.44 -1.11 16 14 C 0.55 2.88 7.77 86.74 0.67 3.55 16 15 O -0.56 -8.16 15.34 -3.94 -0.06 -8.22 16 16 C -0.15 -0.22 5.88 -20.06 -0.12 -0.34 16 17 C 0.14 0.46 7.28 22.67 0.17 0.62 16 18 F -0.12 -1.16 15.55 44.97 0.70 -0.46 16 19 C -0.13 0.25 8.62 22.28 0.19 0.44 16 20 C -0.09 0.23 5.27 -19.78 -0.10 0.12 16 21 C -0.09 0.27 2.44 71.24 0.17 0.44 16 22 O -0.54 -0.17 12.88 -148.98 -1.92 -2.09 16 23 Si 0.77 -3.66 30.23 68.60 2.07 -1.59 16 24 C 0.10 -0.17 7.23 22.33 0.16 -0.01 16 25 F -0.13 -0.12 16.73 44.97 0.75 0.63 16 26 C -0.08 0.29 9.51 22.57 0.21 0.51 16 27 C -0.11 0.41 5.08 30.61 0.16 0.57 16 28 C -0.12 0.36 4.95 30.61 0.15 0.51 16 29 H 0.06 -0.04 8.13 -2.38 -0.02 -0.06 16 30 H 0.13 -0.84 8.14 -2.38 -0.02 -0.86 16 31 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 32 H 0.13 -1.21 8.14 -2.38 -0.02 -1.23 16 33 H 0.13 -1.11 8.14 -2.39 -0.02 -1.13 16 34 H 0.08 -0.83 8.14 -2.39 -0.02 -0.85 16 35 H 0.08 -0.67 8.14 -2.39 -0.02 -0.69 16 36 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 37 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 38 H 0.07 0.00 8.14 -2.38 -0.02 -0.02 16 39 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 40 H 0.41 -3.35 5.68 -92.71 -0.53 -3.87 16 41 H 0.17 -0.87 4.83 -2.91 -0.01 -0.89 16 42 H 0.13 -0.57 7.89 -2.39 -0.02 -0.59 16 43 H 0.39 -2.30 8.70 -74.06 -0.64 -2.95 16 44 H -0.29 -0.84 7.11 99.48 0.71 -0.14 16 45 H -0.27 0.52 6.68 99.48 0.66 1.18 16 46 H 0.18 -1.81 6.41 -2.91 -0.02 -1.83 16 47 H 0.05 0.02 8.14 -2.38 -0.02 0.00 16 48 H 0.07 -0.36 7.18 -2.39 -0.02 -0.37 16 49 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 50 H 0.05 0.16 5.96 -2.38 -0.01 0.14 16 Total: 0.00 -24.83 409.70 2.97 -21.86 By element: Atomic # 1 Polarization: -16.06 SS G_CDS: -0.17 Total: -16.24 kcal Atomic # 6 Polarization: 8.47 SS G_CDS: 4.28 Total: 12.75 kcal Atomic # 7 Polarization: 1.33 SS G_CDS: -2.44 Total: -1.11 kcal Atomic # 8 Polarization: -13.62 SS G_CDS: -2.22 Total: -15.85 kcal Atomic # 9 Polarization: -1.28 SS G_CDS: 1.45 Total: 0.17 kcal Atomic # 14 Polarization: -3.66 SS G_CDS: 2.07 Total: -1.59 kcal Total: -24.83 2.97 -21.86 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16902906_12360598.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -202.594 kcal (2) G-P(sol) polarization free energy of solvation -24.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -227.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.970 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.862 kcal (6) G-S(sol) free energy of system = (1) + (5) -224.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds