Wall clock time and date at job start Sun Mar 7 2021 10:19:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34234 * 116.99947 * 2 1 4 4 O 1.20822 * 120.00090 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99997 * 179.72219 * 3 2 1 6 6 C 1.52992 * 109.47263 * 179.97438 * 5 3 2 7 7 H 1.09001 * 109.47332 * 54.99982 * 6 5 3 8 8 C 1.52998 * 109.47414 * 174.99960 * 6 5 3 9 9 C 1.53001 * 109.47477 * 179.97438 * 8 6 5 10 10 C 1.52999 * 109.47256 * 300.00365 * 9 8 6 11 11 H 1.09009 * 109.47006 * 300.00046 * 10 9 8 12 12 C 1.52993 * 109.47442 * 179.97438 * 10 9 8 13 13 N 1.46504 * 109.47587 * 174.99679 * 12 10 9 14 14 C 1.34765 * 119.99979 * 180.02562 * 13 12 10 15 15 O 1.21589 * 120.00614 * 0.02562 * 14 13 12 16 16 C 1.47543 * 119.99638 * 180.02562 * 14 13 12 17 17 C 1.40144 * 120.19099 * 179.72175 * 16 14 13 18 18 O 1.35652 * 120.14651 * 0.02562 * 17 16 14 19 19 C 1.38708 * 119.69874 * 179.76623 * 17 16 14 20 20 C 1.38048 * 120.08278 * 0.51454 * 19 17 16 21 21 C 1.50703 * 119.80405 * 179.76261 * 20 19 17 22 22 O 1.42905 * 109.47273 * 64.97448 * 21 20 19 23 23 Si 1.86297 * 109.47293 * 184.97417 * 21 20 19 24 24 C 1.38546 * 120.39187 * 359.73522 * 20 19 17 25 25 C 1.37786 * 120.30189 * 0.02562 * 24 20 19 26 26 C 1.53007 * 109.47240 * 59.99634 * 10 9 8 27 27 C 1.52999 * 109.47285 * 295.00303 * 6 5 3 28 28 H 1.09002 * 109.46640 * 59.99976 * 1 2 3 29 29 H 1.08997 * 109.46765 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.46967 * 299.99772 * 1 2 3 31 31 H 1.09001 * 109.47201 * 300.00712 * 5 3 2 32 32 H 1.09001 * 109.46880 * 60.00295 * 5 3 2 33 33 H 1.08995 * 109.47224 * 300.00670 * 8 6 5 34 34 H 1.09006 * 109.46984 * 60.00446 * 8 6 5 35 35 H 1.08999 * 109.46792 * 59.99925 * 9 8 6 36 36 H 1.08995 * 109.47195 * 180.02562 * 9 8 6 37 37 H 1.09002 * 109.47174 * 295.00365 * 12 10 9 38 38 H 1.09009 * 109.46937 * 55.00225 * 12 10 9 39 39 H 0.96999 * 119.99564 * 0.02562 * 13 12 10 40 40 H 0.96700 * 114.00755 * 90.00162 * 18 17 16 41 41 H 1.07997 * 119.95553 * 180.22954 * 19 17 16 42 42 H 1.08997 * 109.47132 * 304.97655 * 21 20 19 43 43 H 0.96698 * 114.00326 * 179.97438 * 22 21 20 44 44 H 1.48497 * 110.00394 * 178.67980 * 23 21 20 45 45 H 1.48503 * 110.00123 * 300.00215 * 23 21 20 46 46 H 1.08001 * 119.85057 * 179.97438 * 24 20 19 47 47 H 1.08000 * 120.04536 * 180.02562 * 25 24 20 48 48 H 1.08993 * 109.46912 * 59.99933 * 26 10 9 49 49 H 1.08999 * 109.46772 * 180.02562 * 26 10 9 50 50 H 1.09000 * 109.47555 * 299.99842 * 27 6 5 51 51 H 1.09004 * 109.47351 * 60.00062 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 0.0063 6 6 4.0001 2.7421 0.0043 7 1 3.5343 3.2599 0.8428 8 6 5.5222 2.8241 0.1365 9 6 5.9561 4.2913 0.1338 10 6 5.5218 4.9492 -1.1774 11 1 5.9877 4.4310 -2.0157 12 6 5.9551 6.4165 -1.1798 13 7 5.6463 7.0149 -2.4810 14 6 5.9424 8.3086 -2.7150 15 8 6.4662 8.9792 -1.8465 16 6 5.6308 8.9113 -4.0252 17 6 5.9316 10.2578 -4.2709 18 8 6.5113 11.0136 -3.3051 19 6 5.6388 10.8127 -5.5080 20 6 5.0440 10.0436 -6.4880 21 6 4.7237 10.6543 -7.8280 22 8 5.9377 11.0189 -8.4878 23 14 3.7984 9.4172 -8.8692 24 6 4.7403 8.7135 -6.2472 25 6 5.0287 8.1446 -5.0258 26 6 3.9997 4.8672 -1.3096 27 6 3.5658 3.4006 -1.3066 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 3.9522 0.7827 0.8990 32 1 3.9599 0.7789 -0.8809 33 1 5.8316 2.3549 1.0703 34 1 5.9881 2.3063 -0.7021 35 1 5.4902 4.8094 0.9720 36 1 7.0405 4.3496 0.2275 37 1 5.4210 6.9544 -0.3966 38 1 7.0279 6.4788 -0.9968 39 1 5.2288 6.4798 -3.1740 40 1 7.4781 11.0002 -3.3223 41 1 5.8722 11.8489 -5.7031 42 1 4.1074 11.5418 -7.6848 43 1 5.8074 11.4189 -9.3585 44 1 3.4488 10.0180 -10.1814 45 1 4.6281 8.2023 -9.0718 46 1 4.2746 8.1199 -7.0201 47 1 4.7905 7.1073 -4.8427 48 1 3.5339 5.3853 -0.4714 49 1 3.6904 5.3356 -2.2439 50 1 4.0316 2.8829 -2.1451 51 1 2.4814 3.3422 -1.4007 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16902906_13422076.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:19:59 Heat of formation + Delta-G solvation = -182.192799 kcal Electronic energy + Delta-G solvation = -32551.015596 eV Core-core repulsion = 27995.574738 eV Total energy + Delta-G solvation = -4555.440858 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -41.72451 -41.58036 -40.26025 -39.47386 -38.43352 -37.56637 -37.30348 -36.10434 -33.94754 -32.74027 -31.63881 -31.12451 -30.11206 -28.38429 -27.40293 -25.57937 -23.89142 -23.75635 -23.25542 -22.39033 -21.56890 -21.26098 -20.67007 -19.38478 -18.69120 -18.60883 -18.54009 -17.66483 -17.55797 -17.44088 -16.72317 -16.54903 -16.42967 -16.14442 -15.91116 -15.56706 -15.38087 -15.21491 -15.05849 -14.95440 -14.57191 -14.36987 -14.19980 -14.07231 -13.98616 -13.70031 -13.39615 -13.29769 -13.02987 -12.95907 -12.91108 -12.66873 -12.55161 -12.50543 -12.15340 -11.99362 -11.85732 -11.76024 -11.64395 -11.62513 -11.39570 -11.13222 -10.87180 -10.79588 -10.57272 -10.25502 -10.00160 -9.78456 -4.90712 -0.42451 0.13673 1.20462 1.26561 1.61896 1.69820 1.81912 1.95309 2.07684 2.53635 3.12520 3.26299 3.54735 3.59096 3.68908 3.72435 3.77428 3.80168 3.87887 4.00847 4.09232 4.17407 4.25404 4.26332 4.30101 4.30458 4.32841 4.49410 4.53430 4.55972 4.59760 4.64524 4.67580 4.69871 4.70758 4.75341 4.81377 4.84192 5.00268 5.00447 5.12211 5.14638 5.20255 5.24781 5.26063 5.28938 5.34075 5.40185 5.42711 5.56674 5.57642 5.62801 6.46109 6.54310 6.69058 6.75495 7.15458 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.370 6.370 3 C 0.454 3.546 4 O -0.536 6.536 5 C -0.108 4.108 6 C -0.075 4.075 7 H 0.059 0.941 8 C -0.106 4.106 9 C -0.113 4.113 10 C -0.087 4.087 11 H 0.096 0.904 12 C 0.125 3.875 13 N -0.711 5.711 14 C 0.554 3.446 15 O -0.566 6.566 16 C -0.181 4.181 17 C 0.152 3.848 18 O -0.497 6.497 19 C -0.140 4.140 20 C -0.035 4.035 21 C -0.097 4.097 22 O -0.557 6.557 23 Si 0.774 3.226 24 C -0.134 4.134 25 C -0.054 4.054 26 C -0.110 4.110 27 C -0.119 4.119 28 H 0.060 0.940 29 H 0.126 0.874 30 H 0.058 0.942 31 H 0.125 0.875 32 H 0.128 0.872 33 H 0.076 0.924 34 H 0.082 0.918 35 H 0.056 0.944 36 H 0.074 0.926 37 H 0.051 0.949 38 H 0.063 0.937 39 H 0.413 0.587 40 H 0.407 0.593 41 H 0.137 0.863 42 H 0.096 0.904 43 H 0.397 0.603 44 H -0.288 1.288 45 H -0.285 1.285 46 H 0.160 0.840 47 H 0.168 0.832 48 H 0.047 0.953 49 H 0.069 0.931 50 H 0.076 0.924 51 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.927 -7.219 -4.240 8.591 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.286 6.286 3 C 0.299 3.701 4 O -0.426 6.426 5 C -0.145 4.145 6 C -0.094 4.094 7 H 0.078 0.922 8 C -0.143 4.143 9 C -0.151 4.151 10 C -0.105 4.105 11 H 0.114 0.886 12 C 0.002 3.998 13 N -0.364 5.364 14 C 0.342 3.658 15 O -0.446 6.446 16 C -0.184 4.184 17 C 0.106 3.894 18 O -0.310 6.310 19 C -0.159 4.159 20 C -0.035 4.035 21 C -0.205 4.205 22 O -0.368 6.368 23 Si 0.678 3.322 24 C -0.151 4.151 25 C -0.072 4.072 26 C -0.148 4.148 27 C -0.156 4.156 28 H 0.079 0.921 29 H 0.144 0.856 30 H 0.076 0.924 31 H 0.143 0.857 32 H 0.146 0.854 33 H 0.094 0.906 34 H 0.100 0.900 35 H 0.075 0.925 36 H 0.093 0.907 37 H 0.070 0.930 38 H 0.081 0.919 39 H 0.251 0.749 40 H 0.266 0.734 41 H 0.154 0.846 42 H 0.114 0.886 43 H 0.248 0.752 44 H -0.216 1.216 45 H -0.212 1.212 46 H 0.177 0.823 47 H 0.185 0.815 48 H 0.066 0.934 49 H 0.088 0.912 50 H 0.095 0.905 51 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -2.105 -7.048 -3.616 8.196 hybrid contribution 0.718 1.105 -0.735 1.509 sum -1.387 -5.943 -4.351 7.495 Atomic orbital electron populations 1.23461 0.75356 1.05368 1.02265 1.86518 1.24573 1.33683 1.83846 1.24538 0.93539 0.80819 0.71156 1.90654 1.68257 1.37144 1.46524 1.21644 0.85156 0.99854 1.07827 1.21006 0.96741 0.92822 0.98831 0.92202 1.21525 0.93111 0.96181 1.03520 1.21495 1.01455 0.95890 0.96251 1.21367 0.96184 0.92765 1.00205 0.88603 1.21439 1.00379 0.93818 0.84161 1.45814 1.62876 1.10528 1.17210 1.18303 0.78257 0.82214 0.87044 1.90804 1.44331 1.62292 1.47205 1.20467 1.07951 0.94499 0.95530 1.18734 0.95060 0.88209 0.87409 1.84707 1.26144 1.68204 1.51919 1.21357 1.01450 1.01661 0.91390 1.19607 0.95939 0.93911 0.94092 1.25213 0.91856 1.07937 0.95496 1.86537 1.30060 1.83302 1.36871 0.93970 0.84389 0.75731 0.78127 1.21221 1.01660 0.93977 0.98282 1.21452 0.94060 1.00602 0.91075 1.21537 0.94674 0.96706 1.01869 1.21675 1.01098 0.95548 0.97265 0.92089 0.85607 0.92358 0.85736 0.85405 0.90568 0.89952 0.92489 0.90692 0.93016 0.91902 0.74860 0.73373 0.84556 0.88573 0.75191 1.21560 1.21239 0.82304 0.81454 0.93392 0.91213 0.90512 0.92518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16 2 O -0.37 -0.63 10.57 -51.46 -0.54 -1.18 16 3 C 0.45 0.95 7.67 71.24 0.55 1.50 16 4 O -0.54 -4.51 13.73 21.98 0.30 -4.21 16 5 C -0.11 0.58 5.29 29.85 0.16 0.74 16 6 C -0.08 0.28 1.84 -10.80 -0.02 0.26 16 7 H 0.06 0.05 7.95 -2.39 -0.02 0.03 16 8 C -0.11 0.75 5.20 30.59 0.16 0.91 16 9 C -0.11 0.55 5.20 30.59 0.16 0.71 16 10 C -0.09 0.42 2.23 -10.79 -0.02 0.40 16 11 H 0.10 -0.74 8.14 -2.38 -0.02 -0.76 16 12 C 0.13 0.05 5.06 86.38 0.44 0.49 16 13 N -0.71 -0.12 5.23 -466.27 -2.44 -2.56 16 14 C 0.55 4.27 7.76 86.70 0.67 4.94 16 15 O -0.57 -9.28 15.16 16.92 0.26 -9.02 16 16 C -0.18 -0.86 5.89 -20.01 -0.12 -0.98 16 17 C 0.15 1.11 6.72 22.85 0.15 1.27 16 18 O -0.50 -4.89 11.58 -68.75 -0.80 -5.69 16 19 C -0.14 -0.63 9.60 22.34 0.21 -0.41 16 20 C -0.03 -0.03 5.39 -19.83 -0.11 -0.14 16 21 C -0.10 0.23 2.78 71.24 0.20 0.42 16 22 O -0.56 -0.33 12.81 -148.98 -1.91 -2.24 16 23 Si 0.77 -3.89 29.83 68.60 2.05 -1.85 16 24 C -0.13 0.33 8.64 22.24 0.19 0.52 16 25 C -0.05 0.13 9.53 22.52 0.21 0.34 16 26 C -0.11 0.34 5.07 30.58 0.16 0.49 16 27 C -0.12 0.34 4.94 30.58 0.15 0.49 16 28 H 0.06 -0.07 8.13 -2.39 -0.02 -0.09 16 29 H 0.13 -0.87 8.14 -2.39 -0.02 -0.89 16 30 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 31 H 0.12 -1.08 8.14 -2.39 -0.02 -1.10 16 32 H 0.13 -1.21 8.14 -2.39 -0.02 -1.23 16 33 H 0.08 -0.61 8.14 -2.39 -0.02 -0.63 16 34 H 0.08 -0.78 8.14 -2.38 -0.02 -0.80 16 35 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 36 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 37 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 38 H 0.06 0.14 8.14 -2.38 -0.02 0.12 16 39 H 0.41 -2.62 5.68 -92.71 -0.53 -3.15 16 40 H 0.41 1.23 9.06 -74.06 -0.67 0.56 16 41 H 0.14 0.52 8.06 -2.91 -0.02 0.50 16 42 H 0.10 -0.53 7.96 -2.39 -0.02 -0.55 16 43 H 0.40 -2.92 8.74 -74.06 -0.65 -3.56 16 44 H -0.29 0.05 7.11 99.48 0.71 0.76 16 45 H -0.29 -0.15 7.04 99.48 0.70 0.55 16 46 H 0.16 -1.20 4.83 -2.91 -0.01 -1.22 16 47 H 0.17 -1.69 6.40 -2.91 -0.02 -1.71 16 48 H 0.05 0.06 8.14 -2.39 -0.02 0.04 16 49 H 0.07 -0.34 7.18 -2.39 -0.02 -0.35 16 50 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 51 H 0.06 0.15 5.97 -2.38 -0.01 0.13 16 Total: 0.00 -28.31 408.25 0.42 -27.88 By element: Atomic # 1 Polarization: -13.41 SS G_CDS: -0.84 Total: -14.24 kcal Atomic # 6 Polarization: 8.76 SS G_CDS: 4.34 Total: 13.11 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -2.44 Total: -2.56 kcal Atomic # 8 Polarization: -19.65 SS G_CDS: -2.69 Total: -22.34 kcal Atomic # 14 Polarization: -3.89 SS G_CDS: 2.05 Total: -1.85 kcal Total: -28.31 0.42 -27.88 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16902906_13422076.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -154.310 kcal (2) G-P(sol) polarization free energy of solvation -28.305 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.422 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.883 kcal (6) G-S(sol) free energy of system = (1) + (5) -182.193 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds