Wall clock time and date at job start Sun Mar 7 2021 10:20:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34231 * 116.99948 * 2 1 4 4 O 1.20830 * 120.00010 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00117 * 180.02562 * 3 2 1 6 6 C 1.52999 * 109.47135 * 180.02562 * 5 3 2 7 7 H 1.09004 * 109.47315 * 54.99648 * 6 5 3 8 8 C 1.53005 * 109.47289 * 174.99720 * 6 5 3 9 9 C 1.52999 * 109.47100 * 179.97438 * 8 6 5 10 10 C 1.53001 * 109.47317 * 300.00005 * 9 8 6 11 11 H 1.09004 * 109.47145 * 300.00142 * 10 9 8 12 12 C 1.52999 * 109.46942 * 180.02562 * 10 9 8 13 13 N 1.46500 * 109.47120 * 175.00101 * 12 10 9 14 14 C 1.34771 * 120.00252 * 180.02562 * 13 12 10 15 15 O 1.21284 * 120.00113 * 0.02562 * 14 13 12 16 16 C 1.50703 * 120.00056 * 179.97438 * 14 13 12 17 17 C 1.50699 * 109.47030 * 180.02562 * 16 14 13 18 18 C 1.34855 * 125.88781 * 274.99714 * 17 16 14 19 19 C 1.40891 * 107.41598 * 180.02562 * 18 17 16 20 20 C 1.34854 * 107.41757 * 0.02562 * 19 18 17 21 21 C 1.50706 * 125.88900 * 180.02562 * 20 19 18 22 22 O 1.42899 * 109.46918 * 119.97621 * 21 20 19 23 23 Si 1.86300 * 109.46985 * 359.97438 * 21 20 19 24 24 N 1.36335 * 108.22050 * 359.97438 * 20 19 18 25 25 C 1.53002 * 109.47214 * 60.00282 * 10 9 8 26 26 C 1.53001 * 109.46942 * 294.99612 * 6 5 3 27 27 H 1.08998 * 109.47282 * 300.00000 * 1 2 3 28 28 H 1.09004 * 109.47000 * 59.99933 * 1 2 3 29 29 H 1.08997 * 109.46954 * 179.97438 * 1 2 3 30 30 H 1.08996 * 109.47536 * 59.99916 * 5 3 2 31 31 H 1.09005 * 109.46865 * 299.99748 * 5 3 2 32 32 H 1.09004 * 109.47001 * 59.99736 * 8 6 5 33 33 H 1.08993 * 109.46862 * 299.99883 * 8 6 5 34 34 H 1.09004 * 109.46558 * 179.97438 * 9 8 6 35 35 H 1.09004 * 109.47129 * 60.00157 * 9 8 6 36 36 H 1.09000 * 109.46917 * 55.00288 * 12 10 9 37 37 H 1.08994 * 109.47267 * 294.99891 * 12 10 9 38 38 H 0.97004 * 120.00018 * 359.97438 * 13 12 10 39 39 H 1.08992 * 109.47358 * 59.99934 * 16 14 13 40 40 H 1.09007 * 109.47321 * 299.99775 * 16 14 13 41 41 H 1.08003 * 126.29002 * 0.03575 * 18 17 16 42 42 H 1.07999 * 126.29269 * 180.26121 * 19 18 17 43 43 H 1.09001 * 109.46750 * 239.97295 * 21 20 19 44 44 H 0.96706 * 113.99572 * 300.00250 * 22 21 20 45 45 H 1.48498 * 110.00375 * 58.68115 * 23 21 20 46 46 H 1.48497 * 109.99760 * 179.97438 * 23 21 20 47 47 H 0.96994 * 125.64064 * 179.97438 * 24 20 19 48 48 H 1.08992 * 109.47131 * 59.99428 * 25 10 9 49 49 H 1.08993 * 109.47036 * 179.97438 * 25 10 9 50 50 H 1.09001 * 109.47388 * 299.99682 * 26 6 5 51 51 H 1.08996 * 109.47465 * 60.00172 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0000 2.7421 0.0002 7 1 3.5381 3.2572 0.8425 8 6 5.5228 2.8238 0.1254 9 6 5.9565 4.2910 0.1255 10 6 5.5161 4.9532 -1.1815 11 1 5.9780 4.4378 -2.0237 12 6 5.9505 6.4202 -1.1816 13 7 5.6354 7.0227 -2.4793 14 6 5.9312 8.3170 -2.7109 15 8 6.4585 8.9829 -1.8452 16 6 5.6076 8.9366 -4.0460 17 6 6.0365 10.3813 -4.0465 18 6 5.3124 11.4210 -3.5847 19 6 6.0802 12.5870 -3.7744 20 6 7.2440 12.2154 -4.3455 21 6 8.3734 13.1365 -4.7293 22 8 9.5563 12.7603 -4.0213 23 14 7.9199 14.8901 -4.2937 24 7 7.2230 10.8628 -4.5148 25 6 3.9934 4.8716 -1.3067 26 6 3.5595 3.4048 -1.3066 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 3.9557 0.7810 -0.8908 31 1 3.9563 0.7806 0.8892 32 1 5.9847 2.3087 -0.7169 33 1 5.8366 2.3517 1.0563 34 1 7.0413 4.3491 0.2152 35 1 5.4946 4.8064 0.9676 36 1 7.0241 6.4812 -1.0038 37 1 5.4207 6.9561 -0.3941 38 1 5.2146 6.4899 -3.1721 39 1 4.5340 8.8759 -4.2242 40 1 6.1375 8.4005 -4.8335 41 1 4.3254 11.3693 -3.1492 42 1 5.7915 13.5929 -3.5077 43 1 8.5533 13.0634 -5.8019 44 1 9.4686 12.8018 -3.0591 45 1 7.6411 14.9963 -2.8390 46 1 9.0259 15.8083 -4.6666 47 1 7.9344 10.3309 -4.9045 48 1 3.5315 5.3869 -0.4647 49 1 3.6796 5.3438 -2.2376 50 1 4.0215 2.8899 -2.1489 51 1 2.4748 3.3467 -1.3959 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16902906_14644196.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:20:30 Heat of formation + Delta-G solvation = -131.179022 kcal Electronic energy + Delta-G solvation = -30493.205319 eV Core-core repulsion = 26165.921387 eV Total energy + Delta-G solvation = -4327.283932 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.192 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.25250 -41.65246 -40.67896 -39.66617 -37.75021 -37.53368 -36.08981 -33.86428 -32.98719 -31.82181 -31.81236 -30.36520 -29.30717 -28.15864 -25.92661 -24.80420 -23.87848 -22.56656 -21.76687 -21.40065 -21.24734 -20.97264 -20.73796 -18.95118 -18.55528 -18.10403 -17.61594 -17.47386 -17.28290 -16.69849 -16.46766 -16.29408 -16.12700 -15.44635 -15.42226 -15.15100 -15.07550 -14.82242 -14.53589 -14.49560 -14.35383 -14.04419 -14.00816 -13.85600 -13.70034 -13.51346 -13.37245 -13.18302 -13.01225 -12.85757 -12.70737 -12.62570 -12.16746 -12.08384 -11.98070 -11.78993 -11.71885 -11.64366 -11.53829 -11.25482 -10.90735 -10.82236 -10.73337 -10.05430 -9.67790 -8.86552 -4.85324 1.16026 1.21149 1.36495 1.69019 1.72447 1.73927 1.94329 2.02699 2.35036 2.54750 3.40609 3.41600 3.55994 3.58435 3.67399 3.76991 3.84868 3.87623 3.93587 4.02851 4.04867 4.13959 4.18518 4.22170 4.32016 4.34874 4.38404 4.39255 4.46838 4.47391 4.49562 4.55437 4.58042 4.63592 4.67164 4.78645 4.84360 4.86347 4.96099 5.05095 5.10739 5.12887 5.18292 5.29167 5.35842 5.38461 5.39670 5.46862 5.50771 6.08220 6.23581 6.43837 6.46551 6.70145 6.75665 7.26473 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.502 6.502 5 C -0.112 4.112 6 C -0.077 4.077 7 H 0.082 0.918 8 C -0.113 4.113 9 C -0.111 4.111 10 C -0.099 4.099 11 H 0.077 0.923 12 C 0.123 3.877 13 N -0.732 5.732 14 C 0.510 3.490 15 O -0.525 6.525 16 C -0.072 4.072 17 C 0.037 3.963 18 C -0.173 4.173 19 C -0.186 4.186 20 C -0.010 4.010 21 C -0.055 4.055 22 O -0.538 6.538 23 Si 0.714 3.286 24 N -0.536 5.536 25 C -0.111 4.111 26 C -0.122 4.122 27 H 0.064 0.936 28 H 0.063 0.937 29 H 0.102 0.898 30 H 0.106 0.894 31 H 0.107 0.893 32 H 0.067 0.933 33 H 0.068 0.932 34 H 0.068 0.932 35 H 0.068 0.932 36 H 0.067 0.933 37 H 0.069 0.931 38 H 0.400 0.600 39 H 0.117 0.883 40 H 0.099 0.901 41 H 0.136 0.864 42 H 0.141 0.859 43 H 0.114 0.886 44 H 0.380 0.620 45 H -0.257 1.257 46 H -0.258 1.258 47 H 0.412 0.588 48 H 0.067 0.933 49 H 0.062 0.938 50 H 0.059 0.941 51 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.379 -5.404 -3.037 6.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.302 3.698 4 O -0.390 6.390 5 C -0.149 4.149 6 C -0.096 4.096 7 H 0.100 0.900 8 C -0.150 4.150 9 C -0.149 4.149 10 C -0.118 4.118 11 H 0.096 0.904 12 C 0.000 4.000 13 N -0.385 5.385 14 C 0.295 3.705 15 O -0.399 6.399 16 C -0.113 4.113 17 C -0.077 4.077 18 C -0.198 4.198 19 C -0.211 4.211 20 C -0.123 4.123 21 C -0.164 4.164 22 O -0.344 6.344 23 Si 0.614 3.386 24 N -0.130 5.130 25 C -0.149 4.149 26 C -0.160 4.160 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.124 0.876 31 H 0.125 0.875 32 H 0.085 0.915 33 H 0.087 0.913 34 H 0.087 0.913 35 H 0.087 0.913 36 H 0.085 0.915 37 H 0.087 0.913 38 H 0.235 0.765 39 H 0.135 0.865 40 H 0.117 0.883 41 H 0.154 0.846 42 H 0.159 0.841 43 H 0.132 0.868 44 H 0.228 0.772 45 H -0.182 1.182 46 H -0.183 1.183 47 H 0.249 0.751 48 H 0.085 0.915 49 H 0.080 0.920 50 H 0.078 0.922 51 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.670 -4.075 -2.582 5.105 hybrid contribution 0.401 -1.360 0.369 1.465 sum -1.268 -5.435 -2.213 6.004 Atomic orbital electron populations 1.23295 0.75987 1.03925 1.02671 1.86514 1.23754 1.33616 1.84029 1.23870 0.92358 0.81339 0.72282 1.90664 1.67300 1.36149 1.44886 1.21531 0.87439 0.99945 1.06033 1.21054 0.95919 0.92664 0.99943 0.89979 1.21563 0.94299 0.96692 1.02468 1.21477 1.01149 0.95390 0.96896 1.21448 0.96728 0.94292 0.99345 0.90433 1.21420 1.00793 0.92665 0.85130 1.46018 1.63958 1.11537 1.16990 1.20595 0.78593 0.81621 0.89697 1.90770 1.41505 1.61282 1.46392 1.20137 1.04359 0.90995 0.95804 1.19490 0.87904 0.93938 1.06364 1.20590 1.01034 0.91439 1.06695 1.20649 0.94630 0.98988 1.06830 1.20781 0.98881 0.83825 1.08822 1.24782 0.84134 1.07335 1.00188 1.86559 1.34926 1.89488 1.23443 0.94443 0.86636 0.73564 0.83982 1.41781 1.15268 1.07012 1.48963 1.21557 0.94323 0.96772 1.02252 1.21732 1.02482 0.95348 0.96388 0.91773 0.91797 0.87950 0.87555 0.87481 0.91476 0.91310 0.91312 0.91337 0.91506 0.91299 0.76520 0.86465 0.88281 0.84585 0.84096 0.86783 0.77225 1.18158 1.18327 0.75133 0.91471 0.91965 0.92221 0.90167 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.32 10.57 -39.26 -0.41 -0.74 16 3 C 0.46 0.41 7.68 36.00 0.28 0.69 16 4 O -0.50 -1.76 13.71 -18.75 -0.26 -2.02 16 5 C -0.11 0.25 5.29 -27.89 -0.15 0.10 16 6 C -0.08 0.14 1.84 -90.62 -0.17 -0.03 16 7 H 0.08 -0.02 7.96 -51.93 -0.41 -0.43 16 8 C -0.11 0.33 5.20 -26.73 -0.14 0.19 16 9 C -0.11 0.26 5.20 -26.73 -0.14 0.12 16 10 C -0.10 0.24 2.22 -90.62 -0.20 0.04 16 11 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 12 C 0.12 -0.07 5.07 -4.04 -0.02 -0.09 16 13 N -0.73 0.91 5.28 -60.30 -0.32 0.59 16 14 C 0.51 0.71 7.82 -10.99 -0.09 0.63 16 15 O -0.52 -3.33 16.03 5.55 0.09 -3.24 16 16 C -0.07 0.09 6.24 -29.03 -0.18 -0.09 16 17 C 0.04 0.07 5.66 -81.79 -0.46 -0.40 16 18 C -0.17 -0.47 10.77 -39.78 -0.43 -0.90 16 19 C -0.19 -0.45 9.37 -39.78 -0.37 -0.82 16 20 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 21 C -0.05 -0.05 3.08 36.01 0.11 0.06 16 22 O -0.54 -1.33 12.88 -35.23 -0.45 -1.79 16 23 Si 0.71 -0.02 30.58 -169.99 -5.20 -5.22 16 24 N -0.54 -0.86 6.07 -5.43 -0.03 -0.89 16 25 C -0.11 0.20 5.08 -26.75 -0.14 0.07 16 26 C -0.12 0.16 4.94 -26.75 -0.13 0.03 16 27 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 28 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 29 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 30 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 31 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 32 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 33 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 35 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 36 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 38 H 0.40 -1.58 7.66 -40.82 -0.31 -1.89 16 39 H 0.12 -0.40 8.14 -51.93 -0.42 -0.82 16 40 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 41 H 0.14 0.22 8.06 -52.48 -0.42 -0.20 16 42 H 0.14 0.10 6.22 -52.49 -0.33 -0.23 16 43 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 44 H 0.38 0.18 8.70 45.56 0.40 0.58 16 45 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 46 H -0.26 -0.73 7.11 56.52 0.40 -0.32 16 47 H 0.41 -0.01 8.96 -40.82 -0.37 -0.38 16 48 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 49 H 0.06 -0.15 7.18 -51.93 -0.37 -0.52 16 50 H 0.06 -0.12 8.14 -51.93 -0.42 -0.55 16 51 H 0.08 0.07 5.96 -51.93 -0.31 -0.24 16 LS Contribution 410.77 15.07 6.19 6.19 Total: 0.00 -10.48 410.77 -10.59 -21.07 By element: Atomic # 1 Polarization: -5.53 SS G_CDS: -8.50 Total: -14.03 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -1.69 Total: 0.07 kcal Atomic # 7 Polarization: 0.05 SS G_CDS: -0.35 Total: -0.30 kcal Atomic # 8 Polarization: -6.75 SS G_CDS: -1.04 Total: -7.78 kcal Atomic # 14 Polarization: -0.02 SS G_CDS: -5.20 Total: -5.22 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -10.48 -10.59 -21.07 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16902906_14644196.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.112 kcal (2) G-P(sol) polarization free energy of solvation -10.477 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.590 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.589 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.067 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.179 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds