Wall clock time and date at job start Sun Mar 7 2021 10:20:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34224 * 117.00077 * 2 1 4 4 O 1.20833 * 120.00103 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00302 * 180.02562 * 3 2 1 6 6 C 1.52999 * 109.47581 * 180.02562 * 5 3 2 7 7 H 1.09006 * 109.46649 * 304.99465 * 6 5 3 8 8 C 1.52996 * 109.47210 * 64.99131 * 6 5 3 9 9 C 1.53009 * 109.46913 * 180.02562 * 8 6 5 10 10 C 1.52998 * 109.47025 * 300.00296 * 9 8 6 11 11 H 1.09001 * 109.47327 * 299.99401 * 10 9 8 12 12 C 1.53006 * 109.46669 * 179.97438 * 10 9 8 13 13 N 1.46500 * 109.47102 * 65.00438 * 12 10 9 14 14 C 1.34777 * 120.00246 * 180.02562 * 13 12 10 15 15 O 1.21283 * 119.99502 * 359.97438 * 14 13 12 16 16 C 1.50697 * 120.00145 * 179.97438 * 14 13 12 17 17 O 1.42903 * 109.46767 * 179.97438 * 16 14 13 18 18 C 1.35898 * 116.99599 * 179.97438 * 17 16 14 19 19 C 1.38736 * 120.06077 * 359.72895 * 18 17 16 20 20 C 1.38146 * 119.94484 * 179.74080 * 19 18 17 21 21 C 1.38265 * 120.05369 * 0.50791 * 20 19 18 22 22 C 1.50704 * 119.93695 * 179.74598 * 21 20 19 23 23 O 1.42904 * 109.47022 * 245.01892 * 22 21 20 24 24 Si 1.86296 * 109.47559 * 5.02210 * 22 21 20 25 25 C 1.38265 * 120.11409 * 359.76654 * 21 20 19 26 26 C 1.38136 * 120.05544 * 359.97438 * 25 21 20 27 27 C 1.52994 * 109.47158 * 60.00104 * 10 9 8 28 28 C 1.52997 * 109.47514 * 299.99799 * 27 10 9 29 29 H 1.09001 * 109.46626 * 60.00180 * 1 2 3 30 30 H 1.09001 * 109.47153 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47070 * 300.00162 * 1 2 3 32 32 H 1.09009 * 109.46972 * 299.99362 * 5 3 2 33 33 H 1.08995 * 109.47473 * 59.99636 * 5 3 2 34 34 H 1.08995 * 109.47545 * 300.00665 * 8 6 5 35 35 H 1.09001 * 109.47371 * 60.00914 * 8 6 5 36 36 H 1.08996 * 109.46794 * 180.02562 * 9 8 6 37 37 H 1.08999 * 109.47167 * 60.00612 * 9 8 6 38 38 H 1.08999 * 109.46907 * 184.99711 * 12 10 9 39 39 H 1.08997 * 109.47111 * 304.99881 * 12 10 9 40 40 H 0.97000 * 119.99938 * 359.97438 * 13 12 10 41 41 H 1.08999 * 109.46750 * 299.99399 * 16 14 13 42 42 H 1.08997 * 109.47588 * 59.99766 * 16 14 13 43 43 H 1.07995 * 120.01954 * 359.97438 * 19 18 17 44 44 H 1.07999 * 119.96868 * 180.23222 * 20 19 18 45 45 H 1.09006 * 109.46550 * 125.02541 * 22 21 20 46 46 H 0.96697 * 113.99709 * 60.00041 * 23 22 21 47 47 H 1.48494 * 109.99890 * 179.97438 * 24 22 21 48 48 H 1.48500 * 109.99831 * 301.32025 * 24 22 21 49 49 H 1.08004 * 119.96843 * 179.97438 * 25 21 20 50 50 H 1.08003 * 120.03117 * 179.97438 * 26 25 21 51 51 H 1.09005 * 109.47156 * 179.97438 * 27 10 9 52 52 H 1.09006 * 109.47246 * 59.99789 * 27 10 9 53 53 H 1.09006 * 109.46856 * 300.00229 * 28 27 10 54 54 H 1.09000 * 109.47693 * 180.02562 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0002 2.7420 0.0002 7 1 3.5376 3.2581 -0.8412 8 6 3.5606 3.4032 1.3080 9 6 3.9940 4.8706 1.3084 10 6 5.5165 4.9528 1.1819 11 1 5.9794 4.4371 2.0233 12 6 5.9497 6.4202 1.1817 13 7 5.6356 7.0223 2.4799 14 6 5.9297 8.3171 2.7110 15 8 6.4547 8.9837 1.8445 16 6 5.6061 8.9366 4.0462 17 8 6.0108 10.3071 4.0459 18 6 5.7880 11.0163 5.1836 19 6 5.1870 10.4073 6.2757 20 6 4.9666 11.1290 7.4328 21 6 5.3348 12.4600 7.4995 22 6 5.0878 13.2464 8.7612 23 8 4.1379 14.2814 8.4991 24 14 4.4218 12.1116 10.0800 25 6 5.9287 13.0709 6.4105 26 6 6.1562 12.3521 5.2530 27 6 5.9560 4.2916 -0.1259 28 6 5.5227 2.8243 -0.1264 29 1 -0.3632 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5139 0.8900 32 1 3.9564 0.7806 0.8893 33 1 3.9558 0.7809 -0.8907 34 1 2.4759 3.3450 1.3980 35 1 4.0231 2.8873 2.1494 36 1 3.6812 5.3415 2.2404 37 1 3.5311 5.3864 0.4672 38 1 7.0231 6.4821 1.0028 39 1 5.4187 6.9557 0.3948 40 1 5.2154 6.4892 3.1728 41 1 4.5326 8.8744 4.2249 42 1 6.1371 8.4014 4.8333 43 1 4.8953 9.3688 6.2224 44 1 4.5022 10.6542 8.2845 45 1 6.0235 13.6898 9.1019 46 1 3.2798 13.9589 8.1913 47 1 4.1747 12.8750 11.3295 48 1 3.1627 11.4763 9.6149 49 1 6.2150 14.1108 6.4651 50 1 6.6198 12.8298 4.4025 51 1 7.0407 4.3506 -0.2162 52 1 5.4931 4.8074 -0.9673 53 1 5.9856 2.3085 0.7150 54 1 5.8362 2.3531 -1.0580 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16902906_2989410.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:20:49 Heat of formation + Delta-G solvation = -176.532400 kcal Electronic energy + Delta-G solvation = -33532.557626 eV Core-core repulsion = 28821.824602 eV Total energy + Delta-G solvation = -4710.733024 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.197 amu Computer time = 1.69 seconds Orbital eigenvalues (eV) -41.68872 -41.54768 -40.72423 -39.73129 -38.99401 -37.59825 -37.24631 -36.17821 -33.80640 -32.40590 -31.77060 -31.64869 -30.64729 -29.36297 -28.00938 -26.29367 -25.49744 -23.99512 -23.70876 -22.57178 -22.28343 -21.68682 -21.24406 -20.66579 -19.50992 -18.57924 -18.55044 -18.18190 -17.62169 -17.48680 -17.46080 -17.09225 -16.81919 -16.35325 -16.26319 -16.06752 -15.73340 -15.55096 -15.28213 -15.07640 -14.98829 -14.83792 -14.63615 -14.39957 -14.36630 -14.25298 -13.78732 -13.73984 -13.52816 -13.41307 -13.34999 -13.03869 -12.92775 -12.68419 -12.52858 -12.30423 -12.12667 -12.07369 -12.01001 -11.87023 -11.77431 -11.64341 -11.60943 -11.40840 -11.18227 -10.94404 -10.81140 -10.57703 -10.20893 -10.04201 -9.24852 -4.90344 0.26782 0.30585 1.18768 1.33962 1.43074 1.49123 1.61007 1.80453 1.98515 2.60501 2.64237 3.45128 3.52385 3.54481 3.68234 3.73633 3.76367 3.82475 3.86192 3.93569 3.99184 4.02529 4.08059 4.16041 4.24673 4.28491 4.30351 4.31416 4.42213 4.48161 4.52743 4.54610 4.54960 4.63249 4.65695 4.68404 4.69345 4.69923 4.80066 4.83570 4.96998 4.99502 5.12786 5.15460 5.18908 5.23469 5.25210 5.27794 5.32116 5.37548 5.41101 5.49265 5.55470 5.61563 5.69344 6.25352 6.45162 6.50684 6.73798 7.10722 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.370 6.370 3 C 0.454 3.546 4 O -0.537 6.537 5 C -0.108 4.108 6 C -0.076 4.076 7 H 0.059 0.941 8 C -0.119 4.119 9 C -0.110 4.110 10 C -0.085 4.085 11 H 0.098 0.902 12 C 0.125 3.875 13 N -0.707 5.707 14 C 0.510 3.490 15 O -0.576 6.576 16 C 0.037 3.963 17 O -0.320 6.320 18 C 0.121 3.879 19 C -0.200 4.200 20 C -0.077 4.077 21 C -0.158 4.158 22 C -0.083 4.083 23 O -0.552 6.552 24 Si 0.773 3.227 25 C -0.059 4.059 26 C -0.167 4.167 27 C -0.114 4.114 28 C -0.106 4.106 29 H 0.057 0.943 30 H 0.126 0.874 31 H 0.060 0.940 32 H 0.129 0.871 33 H 0.124 0.876 34 H 0.055 0.945 35 H 0.077 0.923 36 H 0.071 0.929 37 H 0.046 0.954 38 H 0.062 0.938 39 H 0.051 0.949 40 H 0.420 0.580 41 H 0.124 0.876 42 H 0.130 0.870 43 H 0.164 0.836 44 H 0.152 0.848 45 H 0.121 0.879 46 H 0.385 0.615 47 H -0.307 1.307 48 H -0.277 1.277 49 H 0.134 0.866 50 H 0.126 0.874 51 H 0.075 0.925 52 H 0.055 0.945 53 H 0.083 0.917 54 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.317 -10.808 3.837 11.473 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.286 6.286 3 C 0.299 3.701 4 O -0.427 6.427 5 C -0.145 4.145 6 C -0.094 4.094 7 H 0.077 0.923 8 C -0.156 4.156 9 C -0.148 4.148 10 C -0.104 4.104 11 H 0.117 0.883 12 C 0.001 3.999 13 N -0.362 5.362 14 C 0.296 3.704 15 O -0.455 6.455 16 C -0.041 4.041 17 O -0.234 6.234 18 C 0.075 3.925 19 C -0.218 4.218 20 C -0.094 4.094 21 C -0.158 4.158 22 C -0.191 4.191 23 O -0.360 6.360 24 Si 0.678 3.322 25 C -0.078 4.078 26 C -0.185 4.185 27 C -0.152 4.152 28 C -0.143 4.143 29 H 0.076 0.924 30 H 0.144 0.856 31 H 0.079 0.921 32 H 0.146 0.854 33 H 0.142 0.858 34 H 0.073 0.927 35 H 0.095 0.905 36 H 0.090 0.910 37 H 0.065 0.935 38 H 0.081 0.919 39 H 0.069 0.931 40 H 0.258 0.742 41 H 0.141 0.859 42 H 0.147 0.853 43 H 0.182 0.818 44 H 0.169 0.831 45 H 0.139 0.861 46 H 0.234 0.766 47 H -0.236 1.236 48 H -0.204 1.204 49 H 0.152 0.848 50 H 0.144 0.856 51 H 0.093 0.907 52 H 0.074 0.926 53 H 0.101 0.899 54 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 0.383 -9.811 3.730 10.503 hybrid contribution -1.557 0.803 -0.780 1.918 sum -1.174 -9.008 2.949 9.551 Atomic orbital electron populations 1.23462 0.75357 1.05382 1.02244 1.86517 1.24568 1.33695 1.83830 1.24554 0.93569 0.80810 0.71136 1.90655 1.68279 1.37149 1.46567 1.21649 0.85101 0.99898 1.07848 1.21011 0.96769 0.92791 0.98853 0.92293 1.21686 1.01022 0.95663 0.97266 1.21549 0.94715 0.96609 1.01899 1.21358 0.96099 0.92714 1.00228 0.88332 1.21441 1.00398 0.93755 0.84259 1.45707 1.62751 1.10124 1.17590 1.20580 0.78106 0.82557 0.89150 1.90766 1.43978 1.62767 1.47996 1.22746 1.03948 0.81267 0.96113 1.86132 1.78843 1.23587 1.34796 1.19235 0.95836 0.91749 0.85640 1.21493 1.04864 1.02514 0.92979 1.21099 0.97436 0.93070 0.97829 1.20280 1.03370 0.95183 0.96998 1.25249 0.97139 0.96201 1.00525 1.86575 1.26728 1.34334 1.88338 0.94084 0.83611 0.80705 0.73791 1.20922 0.95668 0.99894 0.91275 1.20626 1.05587 0.92336 0.99975 1.21504 1.01473 0.95856 0.96370 1.21523 0.93047 0.96222 1.03546 0.92376 0.85589 0.92104 0.85352 0.85755 0.92657 0.90459 0.90989 0.93495 0.91928 0.93070 0.74195 0.85886 0.85267 0.81844 0.83064 0.86106 0.76553 1.23582 1.20371 0.84804 0.85609 0.90662 0.92603 0.89870 0.90650 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.14 16 2 O -0.37 -0.50 10.57 -51.35 -0.54 -1.04 16 3 C 0.45 0.74 7.67 71.23 0.55 1.29 16 4 O -0.54 -4.27 13.72 21.94 0.30 -3.96 16 5 C -0.11 0.64 5.29 29.85 0.16 0.80 16 6 C -0.08 0.35 1.84 -10.80 -0.02 0.33 16 7 H 0.06 0.01 7.95 -2.38 -0.02 -0.01 16 8 C -0.12 0.46 4.95 30.60 0.15 0.62 16 9 C -0.11 0.52 5.08 30.60 0.16 0.67 16 10 C -0.09 0.58 2.23 -10.79 -0.02 0.55 16 11 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 12 C 0.12 -0.24 5.06 86.38 0.44 0.20 16 13 N -0.71 2.83 5.28 -463.06 -2.45 0.38 16 14 C 0.51 1.66 7.91 87.66 0.69 2.35 16 15 O -0.58 -8.93 16.50 16.00 0.26 -8.66 16 16 C 0.04 -0.11 5.22 71.24 0.37 0.26 16 17 O -0.32 -2.03 9.67 -73.36 -0.71 -2.74 16 18 C 0.12 0.44 6.69 22.51 0.15 0.59 16 19 C -0.20 0.49 9.04 22.37 0.20 0.70 16 20 C -0.08 0.21 8.66 22.25 0.19 0.40 16 21 C -0.16 -0.03 5.35 -19.85 -0.11 -0.14 16 22 C -0.08 0.05 2.80 71.24 0.20 0.25 16 23 O -0.55 -1.71 12.83 -148.98 -1.91 -3.63 16 24 Si 0.77 -2.39 29.88 68.60 2.05 -0.34 16 25 C -0.06 -0.17 9.68 22.25 0.22 0.04 16 26 C -0.17 -0.85 9.99 22.37 0.22 -0.63 16 27 C -0.11 0.69 5.20 30.59 0.16 0.85 16 28 C -0.11 0.85 5.21 30.59 0.16 1.01 16 29 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 30 H 0.13 -0.91 8.14 -2.39 -0.02 -0.93 16 31 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 32 H 0.13 -1.30 8.14 -2.38 -0.02 -1.32 16 33 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 34 H 0.05 0.10 5.96 -2.39 -0.01 0.09 16 35 H 0.08 -0.56 8.14 -2.39 -0.02 -0.57 16 36 H 0.07 -0.50 7.18 -2.39 -0.02 -0.52 16 37 H 0.05 -0.01 8.14 -2.39 -0.02 -0.03 16 38 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 39 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 40 H 0.42 -4.81 7.65 -92.71 -0.71 -5.52 16 41 H 0.12 -1.12 7.65 -2.39 -0.02 -1.14 16 42 H 0.13 -1.30 7.68 -2.39 -0.02 -1.32 16 43 H 0.16 -1.60 6.30 -2.91 -0.02 -1.61 16 44 H 0.15 -1.13 4.83 -2.91 -0.01 -1.14 16 45 H 0.12 -0.21 7.96 -2.38 -0.02 -0.23 16 46 H 0.39 -0.98 8.70 -74.06 -0.64 -1.62 16 47 H -0.31 -1.63 7.11 99.48 0.71 -0.92 16 48 H -0.28 0.11 7.00 99.48 0.70 0.81 16 49 H 0.13 0.25 8.06 -2.91 -0.02 0.23 16 50 H 0.13 0.73 8.06 -2.91 -0.02 0.70 16 51 H 0.07 -0.50 8.14 -2.38 -0.02 -0.52 16 52 H 0.06 -0.18 8.14 -2.38 -0.02 -0.20 16 53 H 0.08 -0.87 8.14 -2.38 -0.02 -0.89 16 54 H 0.07 -0.65 8.14 -2.39 -0.02 -0.67 16 Total: 0.00 -29.92 432.92 1.66 -28.27 By element: Atomic # 1 Polarization: -19.15 SS G_CDS: -0.41 Total: -19.55 kcal Atomic # 6 Polarization: 6.22 SS G_CDS: 5.06 Total: 11.28 kcal Atomic # 7 Polarization: 2.83 SS G_CDS: -2.45 Total: 0.38 kcal Atomic # 8 Polarization: -17.43 SS G_CDS: -2.60 Total: -20.03 kcal Atomic # 14 Polarization: -2.39 SS G_CDS: 2.05 Total: -0.34 kcal Total: -29.92 1.66 -28.27 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16902906_2989410.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.266 kcal (2) G-P(sol) polarization free energy of solvation -29.925 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.191 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.659 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.266 kcal (6) G-S(sol) free energy of system = (1) + (5) -176.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds