Wall clock time and date at job start Sun Mar 7 2021 10:22:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34226 * 116.99798 * 2 1 4 4 O 1.20824 * 119.99959 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99900 * 179.97438 * 3 2 1 6 6 C 1.53000 * 109.46912 * 180.02562 * 5 3 2 7 7 H 1.09002 * 109.47069 * 304.99691 * 6 5 3 8 8 C 1.52993 * 109.47345 * 65.00249 * 6 5 3 9 9 C 1.53000 * 109.47345 * 180.02562 * 8 6 5 10 10 C 1.53006 * 109.46846 * 300.00008 * 9 8 6 11 11 H 1.08993 * 109.46769 * 299.99438 * 10 9 8 12 12 C 1.53000 * 109.46846 * 180.02562 * 10 9 8 13 13 N 1.46497 * 109.47676 * 64.99596 * 12 10 9 14 14 C 1.34770 * 120.00569 * 179.97438 * 13 12 10 15 15 O 1.21701 * 119.99618 * 0.02562 * 14 13 12 16 16 C 1.46670 * 120.00251 * 180.02562 * 14 13 12 17 17 C 1.37880 * 126.23370 * 179.69204 * 16 14 13 18 18 C 1.39835 * 107.08499 * 179.84768 * 17 16 14 19 19 C 1.35449 * 107.86454 * 0.41588 * 18 17 16 20 20 C 1.50705 * 125.56321 * 179.76150 * 19 18 17 21 21 O 1.42900 * 109.47042 * 244.97617 * 20 19 18 22 22 Si 1.86294 * 109.47274 * 4.97542 * 20 19 18 23 23 N 1.35538 * 108.87480 * 359.74386 * 19 18 17 24 24 C 1.52993 * 109.47155 * 59.99875 * 10 9 8 25 25 C 1.53000 * 109.47345 * 299.99819 * 24 10 9 26 26 H 1.08993 * 109.47391 * 299.99599 * 1 2 3 27 27 H 1.09000 * 109.47246 * 59.99772 * 1 2 3 28 28 H 1.09001 * 109.46940 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47152 * 60.00249 * 5 3 2 30 30 H 1.09001 * 109.46980 * 300.00350 * 5 3 2 31 31 H 1.09002 * 109.47179 * 299.99584 * 8 6 5 32 32 H 1.08993 * 109.47639 * 59.99724 * 8 6 5 33 33 H 1.09001 * 109.47624 * 179.97438 * 9 8 6 34 34 H 1.09002 * 109.47069 * 59.99442 * 9 8 6 35 35 H 1.09004 * 109.46958 * 185.00122 * 12 10 9 36 36 H 1.09003 * 109.47441 * 304.99610 * 12 10 9 37 37 H 0.97001 * 119.99413 * 0.02562 * 13 12 10 38 38 H 1.07998 * 126.45744 * 359.97438 * 17 16 14 39 39 H 1.07996 * 126.06784 * 180.15742 * 18 17 16 40 40 H 1.09005 * 109.47265 * 124.97993 * 20 19 18 41 41 H 0.96701 * 114.00326 * 180.02562 * 21 20 19 42 42 H 1.48500 * 110.00032 * 300.00194 * 22 20 19 43 43 H 1.48499 * 109.99792 * 61.31926 * 22 20 19 44 44 H 0.96998 * 125.68140 * 180.02562 * 23 19 18 45 45 H 1.09002 * 109.47179 * 180.02562 * 24 10 9 46 46 H 1.09002 * 109.47493 * 60.00117 * 24 10 9 47 47 H 1.09002 * 109.47069 * 300.00558 * 25 24 10 48 48 H 1.09001 * 109.47624 * 180.02562 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7421 0.0011 7 1 3.5381 3.2578 -0.8408 8 6 3.5596 3.4037 1.3084 9 6 3.9928 4.8711 1.3086 10 6 5.5155 4.9534 1.1831 11 1 5.9777 4.4380 2.0250 12 6 5.9487 6.4207 1.1840 13 7 5.6337 7.0222 2.4821 14 6 5.9285 8.3166 2.7145 15 8 6.4561 8.9859 1.8457 16 6 5.6137 8.9186 4.0144 17 6 5.8629 10.2213 4.3910 18 6 5.4012 10.3652 5.7031 19 6 4.8978 9.1718 6.0996 20 6 4.2982 8.8789 7.4508 21 8 5.1105 7.9230 8.1352 22 14 4.2155 10.4506 8.4475 23 7 5.0209 8.2843 5.0826 24 6 5.9559 4.2918 -0.1242 25 6 5.5227 2.8244 -0.1244 26 1 -0.3634 0.5137 0.8899 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 3.9564 0.7806 -0.8892 30 1 3.9557 0.7809 0.8908 31 1 2.4748 3.3456 1.3976 32 1 4.0215 2.8881 2.1502 33 1 3.6786 5.3426 2.2398 34 1 3.5305 5.3865 0.4668 35 1 7.0223 6.4827 1.0057 36 1 5.4182 6.9567 0.3970 37 1 5.2136 6.4886 3.1747 38 1 6.3255 10.9870 3.7859 39 1 5.4427 11.2665 6.2965 40 1 3.2932 8.4764 7.3229 41 1 4.7835 7.6863 9.0140 42 1 5.5794 11.0092 8.6290 43 1 3.3478 11.4416 7.7620 44 1 4.7381 7.3567 5.1039 45 1 7.0407 4.3500 -0.2134 46 1 5.4936 4.8072 -0.9660 47 1 5.9850 2.3089 0.7175 48 1 5.8369 2.3529 -1.0556 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16902906_6580494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:22:20 Heat of formation + Delta-G solvation = -126.826227 kcal Electronic energy + Delta-G solvation = -29014.259768 eV Core-core repulsion = 24842.702206 eV Total energy + Delta-G solvation = -4171.557562 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.48329 -41.66741 -40.52671 -39.57004 -37.77919 -37.55310 -36.16996 -33.88056 -32.21471 -31.83860 -31.56290 -30.17977 -28.41495 -26.98842 -25.51324 -23.94496 -23.08230 -22.39675 -21.54488 -21.46125 -21.09438 -20.81610 -19.55176 -18.62541 -18.56369 -17.63036 -17.48963 -16.95343 -16.90283 -16.62235 -16.10857 -15.86997 -15.46230 -15.30921 -15.13855 -15.09341 -15.01593 -14.67851 -14.39038 -14.34484 -14.26271 -13.75509 -13.66865 -13.49981 -13.43337 -13.21078 -13.02829 -12.81634 -12.74842 -12.65631 -12.19316 -12.02040 -12.01013 -11.80845 -11.66788 -11.56263 -11.32206 -11.06366 -10.93196 -10.59340 -10.17788 -10.06880 -9.23272 -5.06554 0.37880 1.09666 1.19468 1.51443 1.67061 1.70814 1.95590 2.02573 2.12113 2.42486 3.19262 3.37480 3.53540 3.55745 3.71264 3.73763 3.79425 3.84222 3.97544 4.07313 4.12101 4.15668 4.20493 4.23243 4.29178 4.32866 4.36353 4.40468 4.44121 4.45881 4.53155 4.56393 4.64486 4.75349 4.80834 4.94123 4.99205 5.02211 5.06594 5.08438 5.10073 5.14285 5.26516 5.30582 5.41630 5.48432 5.61780 5.81531 6.20997 6.39787 6.45097 6.73977 7.15414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.112 4.112 6 C -0.077 4.077 7 H 0.082 0.918 8 C -0.122 4.122 9 C -0.112 4.112 10 C -0.100 4.100 11 H 0.078 0.922 12 C 0.124 3.876 13 N -0.730 5.730 14 C 0.590 3.410 15 O -0.524 6.524 16 C -0.049 4.049 17 C -0.096 4.096 18 C -0.206 4.206 19 C 0.068 3.932 20 C -0.060 4.060 21 O -0.549 6.549 22 Si 0.717 3.283 23 N -0.521 5.521 24 C -0.110 4.110 25 C -0.113 4.113 26 H 0.063 0.937 27 H 0.063 0.937 28 H 0.102 0.898 29 H 0.108 0.892 30 H 0.106 0.894 31 H 0.080 0.920 32 H 0.059 0.941 33 H 0.058 0.942 34 H 0.068 0.932 35 H 0.072 0.928 36 H 0.072 0.928 37 H 0.394 0.606 38 H 0.154 0.846 39 H 0.143 0.857 40 H 0.075 0.925 41 H 0.387 0.613 42 H -0.247 1.247 43 H -0.252 1.252 44 H 0.416 0.584 45 H 0.070 0.930 46 H 0.069 0.931 47 H 0.067 0.933 48 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.996 -5.978 4.664 8.152 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.302 3.698 4 O -0.390 6.390 5 C -0.149 4.149 6 C -0.096 4.096 7 H 0.101 0.899 8 C -0.159 4.159 9 C -0.149 4.149 10 C -0.119 4.119 11 H 0.096 0.904 12 C 0.000 4.000 13 N -0.382 5.382 14 C 0.378 3.622 15 O -0.399 6.399 16 C -0.163 4.163 17 C -0.123 4.123 18 C -0.230 4.230 19 C -0.050 4.050 20 C -0.169 4.169 21 O -0.356 6.356 22 Si 0.616 3.384 23 N -0.118 5.118 24 C -0.148 4.148 25 C -0.150 4.150 26 H 0.082 0.918 27 H 0.082 0.918 28 H 0.121 0.879 29 H 0.126 0.874 30 H 0.124 0.876 31 H 0.098 0.902 32 H 0.078 0.922 33 H 0.077 0.923 34 H 0.087 0.913 35 H 0.090 0.910 36 H 0.091 0.909 37 H 0.228 0.772 38 H 0.172 0.828 39 H 0.161 0.839 40 H 0.093 0.907 41 H 0.235 0.765 42 H -0.172 1.172 43 H -0.176 1.176 44 H 0.254 0.746 45 H 0.089 0.911 46 H 0.088 0.912 47 H 0.085 0.915 48 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -2.360 -4.471 3.418 6.103 hybrid contribution -0.611 -1.085 -0.178 1.258 sum -2.971 -5.556 3.240 7.085 Atomic orbital electron populations 1.23295 0.75987 1.03936 1.02658 1.86515 1.23751 1.33597 1.84018 1.23872 0.92361 0.81340 0.72268 1.90662 1.67303 1.36169 1.44912 1.21533 0.87433 0.99918 1.06065 1.21051 0.95974 0.92685 0.99865 0.89944 1.21736 1.02473 0.95245 0.96484 1.21571 0.94408 0.96850 1.02102 1.21461 0.96665 0.94228 0.99560 0.90403 1.21486 1.01231 0.92708 0.84530 1.45891 1.63940 1.11242 1.17162 1.16998 0.78402 0.81420 0.85413 1.90877 1.42802 1.61564 1.44699 1.20452 1.11401 0.94800 0.89622 1.21290 1.01244 0.94456 0.95277 1.20583 1.07594 0.97311 0.97542 1.19945 1.05347 0.90338 0.89403 1.24525 0.94973 1.05163 0.92279 1.86486 1.52447 1.62284 1.34404 0.95175 0.82442 0.74431 0.86401 1.41912 1.46914 1.12100 1.10862 1.21470 1.01276 0.95374 0.96725 1.21567 0.94246 0.96681 1.02537 0.91816 0.91777 0.87930 0.87427 0.87553 0.90176 0.92213 0.92348 0.91340 0.90960 0.90940 0.77229 0.82830 0.83911 0.90677 0.76478 1.17158 1.17642 0.74603 0.91145 0.91239 0.91454 0.91217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.34 10.57 -39.25 -0.41 -0.76 16 3 C 0.46 0.45 7.68 36.01 0.28 0.73 16 4 O -0.50 -1.82 13.72 -18.75 -0.26 -2.08 16 5 C -0.11 0.23 5.29 -27.88 -0.15 0.09 16 6 C -0.08 0.13 1.84 -90.62 -0.17 -0.04 16 7 H 0.08 -0.01 7.96 -51.93 -0.41 -0.42 16 8 C -0.12 0.13 4.94 -26.73 -0.13 0.00 16 9 C -0.11 0.15 5.08 -26.73 -0.14 0.02 16 10 C -0.10 0.20 2.22 -90.62 -0.20 0.00 16 11 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 12 C 0.12 0.01 5.07 -4.04 -0.02 -0.01 16 13 N -0.73 -0.34 5.28 -61.62 -0.33 -0.67 16 14 C 0.59 2.35 7.79 -12.86 -0.10 2.25 16 15 O -0.52 -4.05 16.88 5.19 0.09 -3.96 16 16 C -0.05 -0.17 7.06 -81.98 -0.58 -0.74 16 17 C -0.10 -0.39 10.65 -39.12 -0.42 -0.81 16 18 C -0.21 -0.65 9.32 -39.98 -0.37 -1.03 16 19 C 0.07 0.13 6.50 -81.95 -0.53 -0.40 16 20 C -0.06 0.07 3.07 36.01 0.11 0.18 16 21 O -0.55 0.67 12.86 -35.23 -0.45 0.22 16 22 Si 0.72 -1.43 30.56 -169.99 -5.19 -6.63 16 23 N -0.52 -0.54 5.99 -5.69 -0.03 -0.58 16 24 C -0.11 0.24 5.20 -26.73 -0.14 0.10 16 25 C -0.11 0.31 5.21 -26.73 -0.14 0.17 16 26 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 28 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 29 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 30 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 31 H 0.08 0.09 5.96 -51.93 -0.31 -0.22 16 32 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.06 -0.10 7.18 -51.93 -0.37 -0.48 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 36 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 37 H 0.39 -0.80 6.78 -40.82 -0.28 -1.08 16 38 H 0.15 0.54 8.06 -52.49 -0.42 0.12 16 39 H 0.14 0.32 6.19 -52.49 -0.32 -0.01 16 40 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 41 H 0.39 -2.44 8.74 45.56 0.40 -2.04 16 42 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 43 H -0.25 -0.19 7.11 56.52 0.40 0.22 16 44 H 0.42 -0.76 8.19 -40.82 -0.33 -1.09 16 45 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 46 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 47 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 48 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 LS Contribution 388.52 15.07 5.85 5.85 Total: 0.00 -10.67 388.52 -9.95 -20.62 By element: Atomic # 1 Polarization: -5.99 SS G_CDS: -7.58 Total: -13.57 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: -1.63 Total: 1.54 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -0.36 Total: -1.24 kcal Atomic # 8 Polarization: -5.54 SS G_CDS: -1.04 Total: -6.58 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.19 Total: -6.63 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -10.67 -9.95 -20.62 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16902906_6580494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.205 kcal (2) G-P(sol) polarization free energy of solvation -10.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.876 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.950 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.621 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.826 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds