Wall clock time and date at job start Sun Mar 7 2021 10:22:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34226 * 116.99798 * 2 1 4 4 O 1.20824 * 119.99959 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99900 * 179.97438 * 3 2 1 6 6 C 1.53000 * 109.46912 * 180.02562 * 5 3 2 7 7 H 1.09002 * 109.47069 * 304.99691 * 6 5 3 8 8 C 1.52993 * 109.47345 * 65.00249 * 6 5 3 9 9 C 1.53000 * 109.47345 * 180.02562 * 8 6 5 10 10 C 1.53006 * 109.46846 * 300.00008 * 9 8 6 11 11 H 1.08993 * 109.46769 * 299.99438 * 10 9 8 12 12 C 1.53000 * 109.46846 * 180.02562 * 10 9 8 13 13 N 1.46497 * 109.47676 * 64.99596 * 12 10 9 14 14 C 1.34770 * 120.00569 * 179.97438 * 13 12 10 15 15 O 1.21701 * 119.99618 * 0.02562 * 14 13 12 16 16 C 1.46670 * 120.00251 * 180.02562 * 14 13 12 17 17 C 1.37880 * 126.23370 * 179.69204 * 16 14 13 18 18 C 1.39835 * 107.08499 * 179.84768 * 17 16 14 19 19 C 1.35449 * 107.86454 * 0.41588 * 18 17 16 20 20 C 1.50705 * 125.56321 * 179.76150 * 19 18 17 21 21 O 1.42900 * 109.47042 * 244.97617 * 20 19 18 22 22 Si 1.86294 * 109.47274 * 4.97542 * 20 19 18 23 23 N 1.35538 * 108.87480 * 359.74386 * 19 18 17 24 24 C 1.52993 * 109.47155 * 59.99875 * 10 9 8 25 25 C 1.53000 * 109.47345 * 299.99819 * 24 10 9 26 26 H 1.08993 * 109.47391 * 299.99599 * 1 2 3 27 27 H 1.09000 * 109.47246 * 59.99772 * 1 2 3 28 28 H 1.09001 * 109.46940 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47152 * 60.00249 * 5 3 2 30 30 H 1.09001 * 109.46980 * 300.00350 * 5 3 2 31 31 H 1.09002 * 109.47179 * 299.99584 * 8 6 5 32 32 H 1.08993 * 109.47639 * 59.99724 * 8 6 5 33 33 H 1.09001 * 109.47624 * 179.97438 * 9 8 6 34 34 H 1.09002 * 109.47069 * 59.99442 * 9 8 6 35 35 H 1.09004 * 109.46958 * 185.00122 * 12 10 9 36 36 H 1.09003 * 109.47441 * 304.99610 * 12 10 9 37 37 H 0.97001 * 119.99413 * 0.02562 * 13 12 10 38 38 H 1.07998 * 126.45744 * 359.97438 * 17 16 14 39 39 H 1.07996 * 126.06784 * 180.15742 * 18 17 16 40 40 H 1.09005 * 109.47265 * 124.97993 * 20 19 18 41 41 H 0.96701 * 114.00326 * 180.02562 * 21 20 19 42 42 H 1.48500 * 110.00032 * 300.00194 * 22 20 19 43 43 H 1.48499 * 109.99792 * 61.31926 * 22 20 19 44 44 H 0.96998 * 125.68140 * 180.02562 * 23 19 18 45 45 H 1.09002 * 109.47179 * 180.02562 * 24 10 9 46 46 H 1.09002 * 109.47493 * 60.00117 * 24 10 9 47 47 H 1.09002 * 109.47069 * 300.00558 * 25 24 10 48 48 H 1.09001 * 109.47624 * 180.02562 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7421 0.0011 7 1 3.5381 3.2578 -0.8408 8 6 3.5596 3.4037 1.3084 9 6 3.9928 4.8711 1.3086 10 6 5.5155 4.9534 1.1831 11 1 5.9777 4.4380 2.0250 12 6 5.9487 6.4207 1.1840 13 7 5.6337 7.0222 2.4821 14 6 5.9285 8.3166 2.7145 15 8 6.4561 8.9859 1.8457 16 6 5.6137 8.9186 4.0144 17 6 5.8629 10.2213 4.3910 18 6 5.4012 10.3652 5.7031 19 6 4.8978 9.1718 6.0996 20 6 4.2982 8.8789 7.4508 21 8 5.1105 7.9230 8.1352 22 14 4.2155 10.4506 8.4475 23 7 5.0209 8.2843 5.0826 24 6 5.9559 4.2918 -0.1242 25 6 5.5227 2.8244 -0.1244 26 1 -0.3634 0.5137 0.8899 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 3.9564 0.7806 -0.8892 30 1 3.9557 0.7809 0.8908 31 1 2.4748 3.3456 1.3976 32 1 4.0215 2.8881 2.1502 33 1 3.6786 5.3426 2.2398 34 1 3.5305 5.3865 0.4668 35 1 7.0223 6.4827 1.0057 36 1 5.4182 6.9567 0.3970 37 1 5.2136 6.4886 3.1747 38 1 6.3255 10.9870 3.7859 39 1 5.4427 11.2665 6.2965 40 1 3.2932 8.4764 7.3229 41 1 4.7835 7.6863 9.0140 42 1 5.5794 11.0092 8.6290 43 1 3.3478 11.4416 7.7620 44 1 4.7381 7.3567 5.1039 45 1 7.0407 4.3500 -0.2134 46 1 5.4936 4.8072 -0.9660 47 1 5.9850 2.3089 0.7175 48 1 5.8369 2.3529 -1.0556 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16902906_6580494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:22:19 Heat of formation + Delta-G solvation = -128.388490 kcal Electronic energy + Delta-G solvation = -29014.327513 eV Core-core repulsion = 24842.702206 eV Total energy + Delta-G solvation = -4171.625306 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -42.66489 -41.68996 -40.66507 -39.63425 -37.66435 -37.60690 -36.30689 -33.91003 -32.38013 -31.71848 -31.67103 -30.14510 -28.38132 -27.00290 -25.51817 -23.85173 -23.18626 -22.43067 -21.69196 -21.52143 -21.17256 -20.74429 -19.68132 -18.59128 -18.47381 -17.63865 -17.49331 -17.15922 -16.94426 -16.76019 -16.11970 -15.83158 -15.41563 -15.28080 -15.24340 -15.11564 -15.03681 -14.71334 -14.45504 -14.34884 -14.31505 -13.88585 -13.72844 -13.56468 -13.42801 -13.09469 -12.95751 -12.73717 -12.72463 -12.57113 -12.06838 -12.05058 -11.92192 -11.81119 -11.67919 -11.53434 -11.43660 -11.09192 -10.86728 -10.46953 -10.37434 -10.27067 -9.42232 -4.94321 0.15017 1.16442 1.18469 1.33672 1.74436 1.78106 1.85133 2.01637 2.09538 2.13398 3.30041 3.47540 3.62545 3.66811 3.71625 3.80057 3.81806 3.93810 4.01142 4.10259 4.13834 4.22010 4.26608 4.27503 4.38108 4.42407 4.45777 4.50215 4.57433 4.60282 4.64158 4.66985 4.74825 4.75498 4.76609 4.86268 4.94018 5.06625 5.12759 5.13451 5.22725 5.24783 5.30706 5.36833 5.41521 5.51033 5.56228 5.57570 6.15188 6.33996 6.71526 6.84621 6.92257 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.369 6.369 3 C 0.454 3.546 4 O -0.537 6.537 5 C -0.108 4.108 6 C -0.075 4.075 7 H 0.061 0.939 8 C -0.118 4.118 9 C -0.110 4.110 10 C -0.087 4.087 11 H 0.094 0.906 12 C 0.124 3.876 13 N -0.712 5.712 14 C 0.589 3.411 15 O -0.570 6.570 16 C -0.060 4.060 17 C -0.118 4.118 18 C -0.230 4.230 19 C 0.069 3.931 20 C -0.062 4.062 21 O -0.565 6.565 22 Si 0.812 3.188 23 N -0.506 5.506 24 C -0.112 4.112 25 C -0.106 4.106 26 H 0.060 0.940 27 H 0.058 0.942 28 H 0.126 0.874 29 H 0.126 0.874 30 H 0.128 0.872 31 H 0.056 0.944 32 H 0.075 0.925 33 H 0.064 0.936 34 H 0.049 0.951 35 H 0.066 0.934 36 H 0.057 0.943 37 H 0.409 0.591 38 H 0.147 0.853 39 H 0.144 0.856 40 H 0.107 0.893 41 H 0.410 0.590 42 H -0.299 1.299 43 H -0.291 1.291 44 H 0.431 0.569 45 H 0.076 0.924 46 H 0.059 0.941 47 H 0.081 0.919 48 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.097 -8.422 6.057 10.827 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.286 6.286 3 C 0.300 3.700 4 O -0.427 6.427 5 C -0.145 4.145 6 C -0.094 4.094 7 H 0.079 0.921 8 C -0.156 4.156 9 C -0.147 4.147 10 C -0.105 4.105 11 H 0.112 0.888 12 C 0.001 3.999 13 N -0.364 5.364 14 C 0.377 3.623 15 O -0.450 6.450 16 C -0.174 4.174 17 C -0.145 4.145 18 C -0.254 4.254 19 C -0.051 4.051 20 C -0.172 4.172 21 O -0.375 6.375 22 Si 0.716 3.284 23 N -0.104 5.104 24 C -0.150 4.150 25 C -0.144 4.144 26 H 0.079 0.921 27 H 0.077 0.923 28 H 0.144 0.856 29 H 0.144 0.856 30 H 0.146 0.854 31 H 0.075 0.925 32 H 0.094 0.906 33 H 0.082 0.918 34 H 0.068 0.932 35 H 0.085 0.915 36 H 0.076 0.924 37 H 0.245 0.755 38 H 0.164 0.836 39 H 0.161 0.839 40 H 0.124 0.876 41 H 0.263 0.737 42 H -0.227 1.227 43 H -0.219 1.219 44 H 0.272 0.728 45 H 0.094 0.906 46 H 0.078 0.922 47 H 0.100 0.900 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -2.500 -7.014 4.848 8.886 hybrid contribution -0.606 -0.296 -0.588 0.895 sum -3.106 -7.310 4.260 9.013 Atomic orbital electron populations 1.23464 0.75332 1.05404 1.02249 1.86517 1.24587 1.33639 1.83816 1.24536 0.93539 0.80827 0.71136 1.90653 1.68268 1.37169 1.46578 1.21644 0.85165 0.99792 1.07883 1.21004 0.96768 0.92865 0.98726 0.92080 1.21679 1.01076 0.95401 0.97417 1.21539 0.94723 0.96820 1.01651 1.21369 0.96099 0.92658 1.00415 0.88821 1.21526 1.00719 0.93891 0.83811 1.45769 1.62691 1.10228 1.17708 1.17127 0.77937 0.82106 0.85145 1.90846 1.45184 1.62846 1.46106 1.20319 1.12222 0.94817 0.90025 1.21423 1.02043 0.95072 0.95978 1.20737 1.08789 0.98383 0.97468 1.20486 1.04003 0.89879 0.90703 1.24640 0.96035 1.05974 0.90506 1.86430 1.52969 1.61943 1.36187 0.94241 0.77829 0.72191 0.84103 1.41857 1.45903 1.12712 1.09888 1.21494 1.01560 0.95890 0.96102 1.21531 0.93056 0.96144 1.03627 0.92128 0.92346 0.85554 0.85621 0.85423 0.92518 0.90638 0.91757 0.93169 0.91542 0.92411 0.75495 0.83556 0.83860 0.87570 0.73737 1.22701 1.21854 0.72816 0.90561 0.92249 0.90021 0.90365 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16 2 O -0.37 -0.63 10.57 -51.38 -0.54 -1.17 16 3 C 0.45 0.97 7.68 71.24 0.55 1.52 16 4 O -0.54 -4.55 13.72 21.97 0.30 -4.25 16 5 C -0.11 0.58 5.29 29.85 0.16 0.73 16 6 C -0.07 0.28 1.84 -10.79 -0.02 0.26 16 7 H 0.06 0.05 7.96 -2.39 -0.02 0.03 16 8 C -0.12 0.30 4.94 30.59 0.15 0.45 16 9 C -0.11 0.29 5.08 30.60 0.16 0.45 16 10 C -0.09 0.39 2.22 -10.79 -0.02 0.37 16 11 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 12 C 0.12 0.09 5.07 86.38 0.44 0.53 16 13 N -0.71 -0.87 5.28 -467.08 -2.47 -3.34 16 14 C 0.59 5.48 7.79 86.45 0.67 6.16 16 15 O -0.57 -10.21 16.88 -4.35 -0.07 -10.29 16 16 C -0.06 -0.47 7.06 40.35 0.28 -0.18 16 17 C -0.12 -1.21 10.65 22.57 0.24 -0.97 16 18 C -0.23 -1.76 9.32 22.01 0.21 -1.56 16 19 C 0.07 0.24 6.50 41.34 0.27 0.51 16 20 C -0.06 0.26 3.07 71.24 0.22 0.48 16 21 O -0.56 2.62 12.86 -148.98 -1.92 0.71 16 22 Si 0.81 -3.49 30.56 68.60 2.10 -1.39 16 23 N -0.51 -0.84 5.99 -171.93 -1.03 -1.87 16 24 C -0.11 0.55 5.20 30.59 0.16 0.71 16 25 C -0.11 0.75 5.21 30.60 0.16 0.91 16 26 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 27 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 28 H 0.13 -0.88 8.14 -2.39 -0.02 -0.90 16 29 H 0.13 -1.10 8.14 -2.39 -0.02 -1.12 16 30 H 0.13 -1.19 8.14 -2.39 -0.02 -1.21 16 31 H 0.06 0.17 5.96 -2.39 -0.01 0.15 16 32 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 33 H 0.06 -0.26 7.18 -2.39 -0.02 -0.28 16 34 H 0.05 0.06 8.14 -2.39 -0.02 0.04 16 35 H 0.07 0.17 8.14 -2.38 -0.02 0.15 16 36 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 37 H 0.41 -2.01 6.78 -92.71 -0.63 -2.64 16 38 H 0.15 1.52 8.06 -2.91 -0.02 1.49 16 39 H 0.14 0.92 6.19 -2.91 -0.02 0.90 16 40 H 0.11 -1.02 7.96 -2.38 -0.02 -1.04 16 41 H 0.41 -6.31 8.74 -74.06 -0.65 -6.95 16 42 H -0.30 -1.28 7.11 99.48 0.71 -0.57 16 43 H -0.29 -0.63 7.11 99.48 0.71 0.08 16 44 H 0.43 -2.21 8.19 -92.71 -0.76 -2.97 16 45 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 46 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 47 H 0.08 -0.75 8.14 -2.39 -0.02 -0.77 16 48 H 0.08 -0.64 8.14 -2.39 -0.02 -0.66 16 Total: 0.00 -28.17 388.52 0.18 -27.99 By element: Atomic # 1 Polarization: -16.91 SS G_CDS: -1.00 Total: -17.91 kcal Atomic # 6 Polarization: 6.70 SS G_CDS: 4.81 Total: 11.51 kcal Atomic # 7 Polarization: -1.71 SS G_CDS: -3.50 Total: -5.20 kcal Atomic # 8 Polarization: -12.77 SS G_CDS: -2.23 Total: -15.00 kcal Atomic # 14 Polarization: -3.49 SS G_CDS: 2.10 Total: -1.39 kcal Total: -28.17 0.18 -27.99 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16902906_6580494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.393 kcal (2) G-P(sol) polarization free energy of solvation -28.171 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.565 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.176 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.995 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.388 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds