Wall clock time and date at job start Sun Mar 7 2021 10:22:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34231 * 117.00317 * 2 1 4 4 O 1.20828 * 119.99741 * 0.02562 * 3 2 1 5 5 C 1.50692 * 120.00330 * 180.02562 * 3 2 1 6 6 C 1.53004 * 109.47435 * 179.97438 * 5 3 2 7 7 H 1.09002 * 109.46574 * 55.00067 * 6 5 3 8 8 C 1.52998 * 109.47046 * 174.99862 * 6 5 3 9 9 C 1.53003 * 109.46768 * 180.02562 * 8 6 5 10 10 C 1.52997 * 109.46940 * 299.99995 * 9 8 6 11 11 H 1.09002 * 109.47268 * 299.99954 * 10 9 8 12 12 C 1.53000 * 109.47275 * 180.02562 * 10 9 8 13 13 N 1.46500 * 109.46950 * 65.00192 * 12 10 9 14 14 C 1.34777 * 120.00250 * 180.02562 * 13 12 10 15 15 O 1.21705 * 119.99567 * 359.97438 * 14 13 12 16 16 C 1.46582 * 120.00592 * 179.97438 * 14 13 12 17 17 C 1.36641 * 125.46080 * 180.02562 * 16 14 13 18 18 C 1.37471 * 113.29781 * 180.02562 * 17 16 14 19 19 C 1.50706 * 122.45135 * 180.02562 * 18 17 16 20 20 C 1.33818 * 115.10264 * 359.97438 * 18 17 16 21 21 C 1.50695 * 124.52590 * 180.02562 * 20 18 17 22 22 O 1.42901 * 109.47132 * 313.71932 * 21 20 18 23 23 Si 1.86300 * 109.47223 * 193.72035 * 21 20 18 24 24 S 1.70620 * 110.95286 * 359.72685 * 20 18 17 25 25 C 1.52998 * 109.47386 * 60.00383 * 10 9 8 26 26 C 1.52997 * 109.47191 * 295.00181 * 6 5 3 27 27 H 1.09003 * 109.47575 * 59.99707 * 1 2 3 28 28 H 1.09000 * 109.47202 * 179.97438 * 1 2 3 29 29 H 1.09005 * 109.47089 * 299.99618 * 1 2 3 30 30 H 1.08995 * 109.47117 * 60.00272 * 5 3 2 31 31 H 1.08998 * 109.47093 * 300.00134 * 5 3 2 32 32 H 1.09003 * 109.47568 * 300.00021 * 8 6 5 33 33 H 1.09002 * 109.47267 * 60.00629 * 8 6 5 34 34 H 1.08989 * 109.47389 * 60.00075 * 9 8 6 35 35 H 1.09000 * 109.46862 * 180.02562 * 9 8 6 36 36 H 1.08998 * 109.47272 * 185.00000 * 12 10 9 37 37 H 1.08995 * 109.46905 * 305.00118 * 12 10 9 38 38 H 0.97002 * 120.00167 * 359.97438 * 13 12 10 39 39 H 1.08000 * 123.35359 * 359.97363 * 17 16 14 40 40 H 1.08998 * 109.47032 * 95.82337 * 19 18 17 41 41 H 1.09003 * 109.46971 * 215.81825 * 19 18 17 42 42 H 1.09003 * 109.46802 * 335.82262 * 19 18 17 43 43 H 1.09001 * 109.47406 * 73.71642 * 21 20 18 44 44 H 0.96706 * 113.99693 * 300.00223 * 22 21 20 45 45 H 1.48494 * 110.00012 * 58.67710 * 23 21 20 46 46 H 1.48504 * 110.00082 * 179.97438 * 23 21 20 47 47 H 1.09003 * 109.47568 * 180.02562 * 25 10 9 48 48 H 1.08994 * 109.47548 * 59.99725 * 25 10 9 49 49 H 1.08997 * 109.47411 * 299.99917 * 26 6 5 50 50 H 1.09003 * 109.47243 * 59.99717 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 6 4.0002 2.7421 -0.0011 7 1 3.5382 3.2578 0.8408 8 6 5.5228 2.8236 0.1241 9 6 5.9566 4.2909 0.1242 10 6 5.5161 4.9530 -1.1829 11 1 5.9780 4.4376 -2.0250 12 6 5.9503 6.4201 -1.1831 13 7 7.4134 6.4962 -1.1840 14 6 8.0257 7.6968 -1.1838 15 8 7.3632 8.7178 -1.1834 16 6 9.4896 7.7731 -1.1842 17 6 10.2233 8.9258 -1.1835 18 6 11.5804 8.7065 -1.1846 19 6 12.5816 9.8329 -1.1836 20 6 11.9475 7.4197 -1.1855 21 6 13.3757 6.9389 -1.1863 22 8 14.1239 7.6701 -2.1597 23 14 13.4198 5.1239 -1.6040 24 16 10.5827 6.3958 -1.1775 25 6 3.9934 4.8714 -1.3080 26 6 3.5597 3.4037 -1.3084 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8901 30 1 3.9556 0.7810 -0.8908 31 1 3.9563 0.7805 0.8891 32 1 5.8367 2.3523 1.0554 33 1 5.9848 2.3079 -0.7179 34 1 5.4947 4.8063 0.9662 35 1 7.0414 4.3490 0.2129 36 1 5.5603 6.9143 -2.0728 37 1 5.5613 6.9142 -0.2929 38 1 7.9414 5.6825 -1.1840 39 1 9.7811 9.9112 -1.1831 40 1 12.9015 10.0338 -0.1612 41 1 13.4455 9.5517 -1.7859 42 1 12.1219 10.7279 -1.6030 43 1 13.8123 7.0955 -0.1998 44 1 13.7910 7.5770 -3.0629 45 1 12.7986 4.8934 -2.9329 46 1 14.8230 4.6377 -1.6086 47 1 3.6795 5.3427 -2.2394 48 1 3.5314 5.3868 -0.4660 49 1 4.0215 2.8880 -2.1503 50 1 2.4749 3.3456 -1.3976 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16902906_6739946.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:22:28 Heat of formation + Delta-G solvation = -143.784248 kcal Electronic energy + Delta-G solvation = -30573.757555 eV Core-core repulsion = 26272.279036 eV Total energy + Delta-G solvation = -4301.478519 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.154 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -41.63689 -40.92830 -40.05242 -39.51674 -37.61764 -37.44639 -36.09346 -33.82486 -32.23106 -31.79537 -30.24338 -30.13804 -28.40736 -26.80601 -25.40592 -24.28777 -23.69142 -22.51628 -21.70048 -21.34272 -20.82118 -20.23662 -19.33435 -18.53742 -17.86838 -17.57963 -17.44586 -17.28718 -16.83905 -16.66611 -16.46465 -15.99745 -15.83321 -15.45905 -15.22427 -15.15465 -14.86351 -14.65467 -14.58117 -14.44461 -14.19913 -13.89800 -13.77333 -13.54255 -13.31392 -13.21183 -13.15394 -13.01819 -12.96349 -12.85415 -12.53543 -12.38781 -12.37000 -12.14003 -11.95430 -11.79223 -11.77608 -11.66799 -11.51414 -11.18941 -11.07442 -10.88700 -10.81645 -10.16666 -9.75505 -9.41919 -5.24267 -0.61371 0.28222 0.67260 1.04882 1.23410 1.32518 1.44419 1.74480 1.78038 2.07688 2.22312 3.11306 3.41335 3.51987 3.57534 3.59982 3.71984 3.83968 3.87304 3.96104 4.13772 4.16115 4.23161 4.24447 4.31920 4.34238 4.35924 4.39873 4.41288 4.45965 4.50251 4.54623 4.57451 4.60193 4.68934 4.78150 4.80846 4.82593 4.90765 4.98098 5.03127 5.04330 5.12335 5.15557 5.22625 5.28984 5.36562 5.39221 5.45128 5.45726 5.53384 6.16582 6.38513 6.77859 7.13835 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.502 6.502 5 C -0.112 4.112 6 C -0.078 4.078 7 H 0.082 0.918 8 C -0.114 4.114 9 C -0.115 4.115 10 C -0.101 4.101 11 H 0.079 0.921 12 C 0.123 3.877 13 N -0.726 5.726 14 C 0.590 3.410 15 O -0.525 6.525 16 C -0.258 4.258 17 C -0.050 4.050 18 C -0.087 4.087 19 C -0.108 4.108 20 C -0.239 4.239 21 C -0.031 4.031 22 O -0.517 6.517 23 Si 0.653 3.347 24 S 0.194 5.806 25 C -0.108 4.108 26 C -0.121 4.121 27 H 0.063 0.937 28 H 0.102 0.898 29 H 0.063 0.937 30 H 0.106 0.894 31 H 0.107 0.893 32 H 0.068 0.932 33 H 0.067 0.933 34 H 0.068 0.932 35 H 0.064 0.936 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.398 0.602 39 H 0.155 0.845 40 H 0.070 0.930 41 H 0.091 0.909 42 H 0.065 0.935 43 H 0.128 0.872 44 H 0.379 0.621 45 H -0.241 1.241 46 H -0.234 1.234 47 H 0.067 0.933 48 H 0.068 0.932 49 H 0.060 0.940 50 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.538 -6.526 0.817 6.754 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.149 4.149 6 C -0.096 4.096 7 H 0.100 0.900 8 C -0.151 4.151 9 C -0.153 4.153 10 C -0.119 4.119 11 H 0.097 0.903 12 C 0.000 4.000 13 N -0.378 5.378 14 C 0.376 3.624 15 O -0.403 6.403 16 C -0.378 4.378 17 C -0.083 4.083 18 C -0.100 4.100 19 C -0.166 4.166 20 C -0.358 4.358 21 C -0.143 4.143 22 O -0.324 6.324 23 Si 0.551 3.449 24 S 0.463 5.537 25 C -0.146 4.146 26 C -0.159 4.159 27 H 0.082 0.918 28 H 0.120 0.880 29 H 0.082 0.918 30 H 0.124 0.876 31 H 0.125 0.875 32 H 0.087 0.913 33 H 0.086 0.914 34 H 0.087 0.913 35 H 0.083 0.917 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.233 0.767 39 H 0.172 0.828 40 H 0.089 0.911 41 H 0.109 0.891 42 H 0.084 0.916 43 H 0.146 0.854 44 H 0.227 0.773 45 H -0.165 1.165 46 H -0.157 1.157 47 H 0.085 0.915 48 H 0.087 0.913 49 H 0.079 0.921 50 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 1.222 -7.564 0.782 7.702 hybrid contribution 0.278 1.895 -0.859 2.100 sum 1.501 -5.669 -0.077 5.865 Atomic orbital electron populations 1.23294 0.76003 1.03911 1.02675 1.86511 1.23740 1.33632 1.84044 1.23874 0.92371 0.81339 0.72299 1.90666 1.67300 1.36149 1.44851 1.21529 0.87429 0.99953 1.06014 1.21056 0.95914 0.92667 0.99965 0.89960 1.21577 0.94364 0.96728 1.02437 1.21605 1.00753 0.95551 0.97373 1.21466 0.97298 0.94220 0.98955 0.90297 1.21500 0.78653 0.96835 1.02993 1.45875 1.08171 1.07695 1.76031 1.16945 0.85254 0.83776 0.76389 1.90867 1.65373 1.34443 1.49603 1.24646 0.96897 0.97975 1.18267 1.20746 0.92021 0.99043 0.96510 1.18723 0.94396 0.94605 1.02315 1.20756 0.97930 0.94748 1.03181 1.24322 1.01070 0.97970 1.12441 1.24407 0.86508 1.06624 0.96730 1.86590 1.55844 1.70134 1.19858 0.95439 0.86630 0.75476 0.87341 1.82658 0.94053 1.08103 1.68902 1.21459 0.93514 0.97021 1.02651 1.21736 1.02543 0.95205 0.96372 0.91796 0.87962 0.91779 0.87555 0.87487 0.91343 0.91435 0.91299 0.91737 0.90981 0.90894 0.76730 0.82776 0.91128 0.89092 0.91633 0.85402 0.77274 1.16512 1.15669 0.91464 0.91305 0.92135 0.90082 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.34 10.56 -39.26 -0.41 -0.75 16 3 C 0.46 0.43 7.67 36.00 0.28 0.71 16 4 O -0.50 -1.82 13.72 -18.75 -0.26 -2.07 16 5 C -0.11 0.26 5.29 -27.88 -0.15 0.11 16 6 C -0.08 0.15 1.84 -90.62 -0.17 -0.02 16 7 H 0.08 -0.03 7.96 -51.93 -0.41 -0.44 16 8 C -0.11 0.38 5.20 -26.73 -0.14 0.24 16 9 C -0.12 0.33 5.08 -26.73 -0.14 0.19 16 10 C -0.10 0.23 2.22 -90.62 -0.20 0.02 16 11 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 12 C 0.12 -0.04 5.07 -4.04 -0.02 -0.06 16 13 N -0.73 0.03 5.28 -61.65 -0.33 -0.29 16 14 C 0.59 1.78 7.78 -12.90 -0.10 1.68 16 15 O -0.53 -3.62 16.84 5.18 0.09 -3.54 16 16 C -0.26 -0.41 6.45 -36.80 -0.24 -0.65 16 17 C -0.05 -0.09 9.78 -40.44 -0.40 -0.49 16 18 C -0.09 -0.06 5.75 -106.45 -0.61 -0.67 16 19 C -0.11 0.01 9.74 36.01 0.35 0.36 16 20 C -0.24 0.10 5.61 -35.86 -0.20 -0.10 16 21 C -0.03 0.04 2.68 36.00 0.10 0.14 16 22 O -0.52 0.29 10.27 -35.23 -0.36 -0.08 16 23 Si 0.65 -1.34 30.97 -169.99 -5.26 -6.60 16 24 S 0.19 -0.26 19.34 -107.50 -2.08 -2.33 16 25 C -0.11 0.14 5.21 -26.71 -0.14 0.00 16 26 C -0.12 0.12 4.95 -26.71 -0.13 -0.01 16 27 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 28 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 30 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 31 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 32 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 34 H 0.07 -0.13 8.14 -51.94 -0.42 -0.55 16 35 H 0.06 -0.23 7.18 -51.93 -0.37 -0.60 16 36 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 38 H 0.40 -0.94 6.77 -40.82 -0.28 -1.22 16 39 H 0.15 0.29 8.06 -52.49 -0.42 -0.13 16 40 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 41 H 0.09 0.00 5.55 -51.93 -0.29 -0.29 16 42 H 0.06 -0.03 8.10 -51.93 -0.42 -0.45 16 43 H 0.13 -0.27 7.96 -51.93 -0.41 -0.69 16 44 H 0.38 -1.15 8.70 45.56 0.40 -0.75 16 45 H -0.24 0.05 7.11 56.52 0.40 0.45 16 46 H -0.23 -0.17 7.11 56.52 0.40 0.23 16 47 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 48 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 49 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 50 H 0.08 0.10 5.96 -51.93 -0.31 -0.21 16 LS Contribution 410.41 15.07 6.18 6.18 Total: 0.00 -8.29 410.41 -11.33 -19.62 By element: Atomic # 1 Polarization: -4.59 SS G_CDS: -8.06 Total: -12.65 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: -0.84 Total: 2.51 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.33 Total: -0.29 kcal Atomic # 8 Polarization: -5.49 SS G_CDS: -0.95 Total: -6.44 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.26 Total: -6.60 kcal Atomic # 16 Polarization: -0.26 SS G_CDS: -2.08 Total: -2.33 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -8.29 -11.33 -19.62 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16902906_6739946.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.164 kcal (2) G-P(sol) polarization free energy of solvation -8.293 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.457 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.327 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.620 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.784 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds