Wall clock time and date at job start Sun Mar 7 2021 10:22:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34231 * 117.00317 * 2 1 4 4 O 1.20828 * 119.99741 * 0.02562 * 3 2 1 5 5 C 1.50692 * 120.00330 * 180.02562 * 3 2 1 6 6 C 1.53004 * 109.47435 * 179.97438 * 5 3 2 7 7 H 1.09002 * 109.46574 * 55.00067 * 6 5 3 8 8 C 1.52998 * 109.47046 * 174.99862 * 6 5 3 9 9 C 1.53003 * 109.46768 * 180.02562 * 8 6 5 10 10 C 1.52997 * 109.46940 * 299.99995 * 9 8 6 11 11 H 1.09002 * 109.47268 * 299.99954 * 10 9 8 12 12 C 1.53000 * 109.47275 * 180.02562 * 10 9 8 13 13 N 1.46500 * 109.46950 * 65.00192 * 12 10 9 14 14 C 1.34777 * 120.00250 * 180.02562 * 13 12 10 15 15 O 1.21705 * 119.99567 * 359.97438 * 14 13 12 16 16 C 1.46582 * 120.00592 * 179.97438 * 14 13 12 17 17 C 1.36641 * 125.46080 * 180.02562 * 16 14 13 18 18 C 1.37471 * 113.29781 * 180.02562 * 17 16 14 19 19 C 1.50706 * 122.45135 * 180.02562 * 18 17 16 20 20 C 1.33818 * 115.10264 * 359.97438 * 18 17 16 21 21 C 1.50695 * 124.52590 * 180.02562 * 20 18 17 22 22 O 1.42901 * 109.47132 * 313.71932 * 21 20 18 23 23 Si 1.86300 * 109.47223 * 193.72035 * 21 20 18 24 24 S 1.70620 * 110.95286 * 359.72685 * 20 18 17 25 25 C 1.52998 * 109.47386 * 60.00383 * 10 9 8 26 26 C 1.52997 * 109.47191 * 295.00181 * 6 5 3 27 27 H 1.09003 * 109.47575 * 59.99707 * 1 2 3 28 28 H 1.09000 * 109.47202 * 179.97438 * 1 2 3 29 29 H 1.09005 * 109.47089 * 299.99618 * 1 2 3 30 30 H 1.08995 * 109.47117 * 60.00272 * 5 3 2 31 31 H 1.08998 * 109.47093 * 300.00134 * 5 3 2 32 32 H 1.09003 * 109.47568 * 300.00021 * 8 6 5 33 33 H 1.09002 * 109.47267 * 60.00629 * 8 6 5 34 34 H 1.08989 * 109.47389 * 60.00075 * 9 8 6 35 35 H 1.09000 * 109.46862 * 180.02562 * 9 8 6 36 36 H 1.08998 * 109.47272 * 185.00000 * 12 10 9 37 37 H 1.08995 * 109.46905 * 305.00118 * 12 10 9 38 38 H 0.97002 * 120.00167 * 359.97438 * 13 12 10 39 39 H 1.08000 * 123.35359 * 359.97363 * 17 16 14 40 40 H 1.08998 * 109.47032 * 95.82337 * 19 18 17 41 41 H 1.09003 * 109.46971 * 215.81825 * 19 18 17 42 42 H 1.09003 * 109.46802 * 335.82262 * 19 18 17 43 43 H 1.09001 * 109.47406 * 73.71642 * 21 20 18 44 44 H 0.96706 * 113.99693 * 300.00223 * 22 21 20 45 45 H 1.48494 * 110.00012 * 58.67710 * 23 21 20 46 46 H 1.48504 * 110.00082 * 179.97438 * 23 21 20 47 47 H 1.09003 * 109.47568 * 180.02562 * 25 10 9 48 48 H 1.08994 * 109.47548 * 59.99725 * 25 10 9 49 49 H 1.08997 * 109.47411 * 299.99917 * 26 6 5 50 50 H 1.09003 * 109.47243 * 59.99717 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 6 4.0002 2.7421 -0.0011 7 1 3.5382 3.2578 0.8408 8 6 5.5228 2.8236 0.1241 9 6 5.9566 4.2909 0.1242 10 6 5.5161 4.9530 -1.1829 11 1 5.9780 4.4376 -2.0250 12 6 5.9503 6.4201 -1.1831 13 7 7.4134 6.4962 -1.1840 14 6 8.0257 7.6968 -1.1838 15 8 7.3632 8.7178 -1.1834 16 6 9.4896 7.7731 -1.1842 17 6 10.2233 8.9258 -1.1835 18 6 11.5804 8.7065 -1.1846 19 6 12.5816 9.8329 -1.1836 20 6 11.9475 7.4197 -1.1855 21 6 13.3757 6.9389 -1.1863 22 8 14.1239 7.6701 -2.1597 23 14 13.4198 5.1239 -1.6040 24 16 10.5827 6.3958 -1.1775 25 6 3.9934 4.8714 -1.3080 26 6 3.5597 3.4037 -1.3084 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8901 30 1 3.9556 0.7810 -0.8908 31 1 3.9563 0.7805 0.8891 32 1 5.8367 2.3523 1.0554 33 1 5.9848 2.3079 -0.7179 34 1 5.4947 4.8063 0.9662 35 1 7.0414 4.3490 0.2129 36 1 5.5603 6.9143 -2.0728 37 1 5.5613 6.9142 -0.2929 38 1 7.9414 5.6825 -1.1840 39 1 9.7811 9.9112 -1.1831 40 1 12.9015 10.0338 -0.1612 41 1 13.4455 9.5517 -1.7859 42 1 12.1219 10.7279 -1.6030 43 1 13.8123 7.0955 -0.1998 44 1 13.7910 7.5770 -3.0629 45 1 12.7986 4.8934 -2.9329 46 1 14.8230 4.6377 -1.6086 47 1 3.6795 5.3427 -2.2394 48 1 3.5314 5.3868 -0.4660 49 1 4.0215 2.8880 -2.1503 50 1 2.4749 3.3456 -1.3976 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16902906_6739946.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:22:27 Heat of formation + Delta-G solvation = -140.216675 kcal Electronic energy + Delta-G solvation = -30573.602853 eV Core-core repulsion = 26272.279036 eV Total energy + Delta-G solvation = -4301.323817 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.154 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -41.65685 -41.06512 -40.00530 -39.51768 -37.62860 -37.45727 -36.18824 -33.82568 -32.24799 -31.63026 -30.20158 -30.09939 -28.36799 -26.78653 -25.35776 -24.26737 -23.58095 -22.48540 -21.80933 -21.27615 -20.68640 -20.23495 -19.36208 -18.56167 -17.87025 -17.58076 -17.44905 -17.31200 -16.90977 -16.68963 -16.41442 -15.96853 -15.81811 -15.41565 -15.14307 -15.10739 -14.84723 -14.60911 -14.55169 -14.46326 -14.15793 -13.87160 -13.79415 -13.53598 -13.20334 -13.16375 -13.09384 -12.94491 -12.89178 -12.83329 -12.41655 -12.37526 -12.33845 -11.99258 -11.86115 -11.75779 -11.75033 -11.67237 -11.39746 -11.33391 -11.01720 -10.81591 -10.75514 -10.30978 -9.76418 -9.37154 -5.09561 -0.67342 0.28978 0.68506 1.11175 1.20532 1.29251 1.56155 1.82135 1.89799 1.99671 2.05739 3.26229 3.53648 3.57349 3.71379 3.71779 3.73922 3.91833 4.00524 4.09022 4.11227 4.26581 4.29079 4.31953 4.38153 4.49416 4.49928 4.53011 4.54363 4.57516 4.60450 4.67360 4.68182 4.70339 4.78301 4.81578 4.84418 4.89183 4.99894 5.01308 5.13659 5.19053 5.23625 5.29146 5.29585 5.37318 5.38757 5.43423 5.44214 5.56478 5.63157 6.33030 6.37809 6.75420 7.00752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.369 6.369 3 C 0.453 3.547 4 O -0.538 6.538 5 C -0.107 4.107 6 C -0.075 4.075 7 H 0.061 0.939 8 C -0.107 4.107 9 C -0.116 4.116 10 C -0.088 4.088 11 H 0.095 0.905 12 C 0.124 3.876 13 N -0.709 5.709 14 C 0.587 3.413 15 O -0.575 6.575 16 C -0.284 4.284 17 C -0.062 4.062 18 C -0.102 4.102 19 C -0.105 4.105 20 C -0.238 4.238 21 C -0.039 4.039 22 O -0.531 6.531 23 Si 0.729 3.271 24 S 0.264 5.736 25 C -0.108 4.108 26 C -0.118 4.118 27 H 0.058 0.942 28 H 0.126 0.874 29 H 0.058 0.942 30 H 0.128 0.872 31 H 0.128 0.872 32 H 0.080 0.920 33 H 0.084 0.916 34 H 0.056 0.944 35 H 0.079 0.921 36 H 0.060 0.940 37 H 0.059 0.941 38 H 0.412 0.588 39 H 0.141 0.859 40 H 0.071 0.929 41 H 0.091 0.909 42 H 0.063 0.937 43 H 0.139 0.861 44 H 0.389 0.611 45 H -0.261 1.261 46 H -0.272 1.272 47 H 0.062 0.938 48 H 0.054 0.946 49 H 0.073 0.927 50 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.217 -8.983 0.821 9.577 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.286 6.286 3 C 0.298 3.702 4 O -0.427 6.427 5 C -0.144 4.144 6 C -0.094 4.094 7 H 0.079 0.921 8 C -0.144 4.144 9 C -0.154 4.154 10 C -0.107 4.107 11 H 0.113 0.887 12 C 0.001 3.999 13 N -0.361 5.361 14 C 0.374 3.626 15 O -0.457 6.457 16 C -0.404 4.404 17 C -0.096 4.096 18 C -0.115 4.115 19 C -0.163 4.163 20 C -0.358 4.358 21 C -0.150 4.150 22 O -0.339 6.339 23 Si 0.630 3.370 24 S 0.533 5.467 25 C -0.146 4.146 26 C -0.156 4.156 27 H 0.077 0.923 28 H 0.144 0.856 29 H 0.077 0.923 30 H 0.146 0.854 31 H 0.146 0.854 32 H 0.099 0.901 33 H 0.103 0.897 34 H 0.074 0.926 35 H 0.098 0.902 36 H 0.078 0.922 37 H 0.077 0.923 38 H 0.249 0.751 39 H 0.159 0.841 40 H 0.089 0.911 41 H 0.110 0.890 42 H 0.082 0.918 43 H 0.156 0.844 44 H 0.239 0.761 45 H -0.186 1.186 46 H -0.198 1.198 47 H 0.081 0.919 48 H 0.072 0.928 49 H 0.092 0.908 50 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 2.897 -10.065 0.792 10.504 hybrid contribution -0.227 2.616 -0.882 2.770 sum 2.670 -7.449 -0.090 7.914 Atomic orbital electron populations 1.23457 0.75421 1.05373 1.02208 1.86514 1.24516 1.33703 1.83849 1.24607 0.93662 0.80791 0.71121 1.90658 1.68314 1.37198 1.46568 1.21654 0.84964 0.99864 1.07932 1.21015 0.97138 0.92753 0.98476 0.92084 1.21551 0.92758 0.96281 1.03824 1.21627 1.01547 0.95929 0.96252 1.21371 0.96328 0.92803 1.00155 0.88696 1.21484 0.78450 0.98170 1.01792 1.45758 1.08334 1.07458 1.74569 1.17228 0.85875 0.83796 0.75711 1.90834 1.66575 1.36154 1.52140 1.24645 0.96660 0.99685 1.19445 1.20771 0.92749 0.98883 0.97235 1.18738 0.93918 0.95394 1.03437 1.20729 0.97747 0.94637 1.03223 1.24593 1.02115 0.98011 1.11048 1.24682 0.85792 1.07203 0.97308 1.86569 1.56171 1.70478 1.20724 0.94627 0.83838 0.73176 0.85408 1.82305 0.91853 1.05500 1.67020 1.21431 0.94378 0.96993 1.01830 1.21678 1.00982 0.95344 0.97551 0.92272 0.85555 0.92311 0.85428 0.85421 0.90142 0.89700 0.92566 0.90230 0.92190 0.92286 0.75077 0.84082 0.91059 0.89023 0.91755 0.84400 0.76135 1.18616 1.19769 0.91921 0.92764 0.90795 0.92711 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.70 10.56 -51.43 -0.54 -1.24 16 3 C 0.45 1.04 7.67 71.23 0.55 1.59 16 4 O -0.54 -4.80 13.72 21.96 0.30 -4.50 16 5 C -0.11 0.62 5.29 29.85 0.16 0.77 16 6 C -0.08 0.31 1.84 -10.79 -0.02 0.29 16 7 H 0.06 0.02 7.96 -2.39 -0.02 0.00 16 8 C -0.11 0.94 5.20 30.59 0.16 1.10 16 9 C -0.12 0.79 5.08 30.59 0.16 0.95 16 10 C -0.09 0.43 2.22 -10.80 -0.02 0.40 16 11 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 12 C 0.12 0.04 5.07 86.38 0.44 0.48 16 13 N -0.71 0.04 5.28 -467.18 -2.47 -2.43 16 14 C 0.59 4.21 7.78 86.42 0.67 4.88 16 15 O -0.58 -9.39 16.84 -4.36 -0.07 -9.47 16 16 C -0.28 -1.01 6.45 24.07 0.16 -0.86 16 17 C -0.06 -0.30 9.78 21.71 0.21 -0.09 16 18 C -0.10 -0.16 5.75 -21.05 -0.12 -0.28 16 19 C -0.10 -0.02 9.74 71.24 0.69 0.67 16 20 C -0.24 0.44 5.61 24.68 0.14 0.58 16 21 C -0.04 0.16 2.68 71.23 0.19 0.35 16 22 O -0.53 1.04 10.27 -148.98 -1.53 -0.49 16 23 Si 0.73 -4.17 30.97 68.60 2.12 -2.04 16 24 S 0.26 -1.11 19.34 -56.49 -1.09 -2.20 16 25 C -0.11 0.16 5.21 30.61 0.16 0.32 16 26 C -0.12 0.20 4.95 30.61 0.15 0.35 16 27 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 28 H 0.13 -0.84 8.14 -2.39 -0.02 -0.86 16 29 H 0.06 -0.02 8.13 -2.38 -0.02 -0.03 16 30 H 0.13 -1.24 8.14 -2.39 -0.02 -1.26 16 31 H 0.13 -1.23 8.14 -2.39 -0.02 -1.25 16 32 H 0.08 -0.84 8.14 -2.39 -0.02 -0.85 16 33 H 0.08 -0.97 8.14 -2.39 -0.02 -0.99 16 34 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 35 H 0.08 -0.75 7.18 -2.39 -0.02 -0.77 16 36 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 37 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 38 H 0.41 -2.56 6.77 -92.71 -0.63 -3.19 16 39 H 0.14 0.92 8.06 -2.91 -0.02 0.89 16 40 H 0.07 -0.02 8.14 -2.39 -0.02 -0.03 16 41 H 0.09 0.00 5.55 -2.39 -0.01 -0.02 16 42 H 0.06 0.01 8.10 -2.39 -0.02 -0.01 16 43 H 0.14 -0.82 7.96 -2.39 -0.02 -0.84 16 44 H 0.39 -2.68 8.70 -74.05 -0.64 -3.33 16 45 H -0.26 0.59 7.11 99.48 0.71 1.30 16 46 H -0.27 -0.26 7.11 99.48 0.71 0.45 16 47 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 48 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 49 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 50 H 0.05 0.23 5.96 -2.39 -0.01 0.21 16 Total: 0.00 -22.58 410.41 1.31 -21.27 By element: Atomic # 1 Polarization: -11.31 SS G_CDS: -0.27 Total: -11.58 kcal Atomic # 6 Polarization: 7.82 SS G_CDS: 4.86 Total: 12.68 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -2.47 Total: -2.43 kcal Atomic # 8 Polarization: -13.86 SS G_CDS: -1.85 Total: -15.70 kcal Atomic # 14 Polarization: -4.17 SS G_CDS: 2.12 Total: -2.04 kcal Atomic # 16 Polarization: -1.11 SS G_CDS: -1.09 Total: -2.20 kcal Total: -22.58 1.31 -21.27 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16902906_6739946.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.942 kcal (2) G-P(sol) polarization free energy of solvation -22.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.526 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.309 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.275 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.217 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds