Wall clock time and date at job start Sun Mar 7 2021 10:22:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34234 * 116.99980 * 2 1 4 4 O 1.20830 * 119.99811 * 359.97438 * 3 2 1 5 5 C 1.50699 * 120.00051 * 180.02562 * 3 2 1 6 6 C 1.52992 * 109.47482 * 179.97438 * 5 3 2 7 7 H 1.09002 * 109.47103 * 54.99613 * 6 5 3 8 8 C 1.52997 * 109.47482 * 174.99860 * 6 5 3 9 9 C 1.53000 * 109.47060 * 180.02562 * 8 6 5 10 10 C 1.53002 * 109.47233 * 299.99657 * 9 8 6 11 11 H 1.09002 * 109.47075 * 300.00932 * 10 9 8 12 12 C 1.52997 * 109.47415 * 180.02562 * 10 9 8 13 13 N 1.46493 * 109.47228 * 175.00130 * 12 10 9 14 14 C 1.34782 * 120.00325 * 180.02562 * 13 12 10 15 15 O 1.21636 * 119.99242 * 359.97438 * 14 13 12 16 16 C 1.47183 * 120.00253 * 180.02562 * 14 13 12 17 17 C 1.36011 * 123.46110 * 0.02562 * 16 14 13 18 18 S 1.70453 * 110.81407 * 179.97438 * 17 16 14 19 19 C 1.75497 * 92.44645 * 359.97438 * 18 17 16 20 20 C 1.50698 * 124.71078 * 179.97438 * 19 18 17 21 21 O 1.42908 * 109.47415 * 245.02546 * 20 19 18 22 22 Si 1.86301 * 109.47260 * 5.02819 * 20 19 18 23 23 C 1.32774 * 110.57557 * 359.74201 * 19 18 17 24 24 C 1.52997 * 109.46817 * 60.00194 * 10 9 8 25 25 C 1.52999 * 109.46961 * 295.00221 * 6 5 3 26 26 H 1.08997 * 109.47096 * 59.99920 * 1 2 3 27 27 H 1.08993 * 109.47140 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.46993 * 300.00379 * 1 2 3 29 29 H 1.09001 * 109.47106 * 59.99404 * 5 3 2 30 30 H 1.09002 * 109.46753 * 299.99634 * 5 3 2 31 31 H 1.09002 * 109.47153 * 59.99783 * 8 6 5 32 32 H 1.09001 * 109.46832 * 299.99974 * 8 6 5 33 33 H 1.08992 * 109.47399 * 59.99823 * 9 8 6 34 34 H 1.09004 * 109.46724 * 180.02562 * 9 8 6 35 35 H 1.09000 * 109.46818 * 295.00198 * 12 10 9 36 36 H 1.09001 * 109.47096 * 55.00094 * 12 10 9 37 37 H 0.97003 * 120.00270 * 0.02562 * 13 12 10 38 38 H 1.07994 * 124.59423 * 0.02562 * 17 16 14 39 39 H 1.08995 * 109.47199 * 125.02803 * 20 19 18 40 40 H 0.96703 * 113.99452 * 59.99628 * 21 20 19 41 41 H 1.48494 * 110.00032 * 180.02562 * 22 20 19 42 42 H 1.48508 * 109.99455 * 301.31602 * 22 20 19 43 43 H 1.08004 * 123.45668 * 180.24754 * 23 19 18 44 44 H 1.09002 * 109.47153 * 60.00231 * 24 10 9 45 45 H 1.09001 * 109.47289 * 180.02562 * 24 10 9 46 46 H 1.09000 * 109.47486 * 59.99547 * 25 6 5 47 47 H 1.09002 * 109.46716 * 299.99630 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5664 1.2749 -0.0006 6 6 4.0002 2.7420 -0.0011 7 1 3.5383 3.2578 0.8407 8 6 5.5229 2.8237 0.1241 9 6 5.9566 4.2910 0.1242 10 6 5.5161 4.9531 -1.1829 11 1 5.9780 4.4376 -2.0250 12 6 5.9504 6.4202 -1.1831 13 7 5.6353 7.0225 -2.4808 14 6 5.9310 8.3169 -2.7126 15 8 6.4590 8.9850 -1.8440 16 6 5.6139 8.9222 -4.0162 17 6 5.0234 8.2419 -5.0352 18 16 4.8056 9.2513 -6.3913 19 6 5.5246 10.6289 -5.5756 20 6 5.6965 11.9950 -6.1880 21 8 7.0894 12.2867 -6.3186 22 14 4.8950 12.0272 -7.8695 23 6 5.8915 10.3015 -4.3422 24 6 3.9935 4.8714 -1.3081 25 6 3.5597 3.4036 -1.3084 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 3.9557 0.7809 -0.8908 30 1 3.9564 0.7807 0.8892 31 1 5.9848 2.3079 -0.7178 32 1 5.8366 2.3524 1.0555 33 1 5.4947 4.8063 0.9662 34 1 7.0415 4.3491 0.2129 35 1 5.4205 6.9560 -0.3956 36 1 7.0240 6.4813 -1.0053 37 1 5.2139 6.4898 -3.1733 38 1 4.7312 7.2032 -4.9908 39 1 5.2275 12.7419 -5.5476 40 1 7.5716 11.6611 -6.8765 41 1 5.0582 13.3690 -8.4843 42 1 5.5042 10.9916 -8.7423 43 1 6.3533 10.9946 -3.6547 44 1 3.5315 5.3869 -0.4660 45 1 3.6796 5.3427 -2.2395 46 1 2.4749 3.3455 -1.3976 47 1 4.0216 2.8878 -2.1503 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16902906_6894386.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:22:32 Heat of formation + Delta-G solvation = -141.300807 kcal Electronic energy + Delta-G solvation = -28499.646074 eV Core-core repulsion = 24353.812865 eV Total energy + Delta-G solvation = -4145.833210 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.138 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.65721 -40.98961 -39.84712 -38.81339 -37.55537 -37.14685 -36.09970 -33.82154 -31.90167 -31.78418 -30.12859 -28.34405 -26.97363 -26.38385 -24.74684 -23.85502 -22.53447 -21.93100 -21.40334 -20.91739 -20.33724 -19.05571 -18.54951 -18.04244 -17.75620 -17.59695 -17.46776 -16.67704 -16.53613 -16.38403 -15.99073 -15.64534 -15.42923 -15.27345 -15.11875 -14.90942 -14.48288 -14.43272 -14.25273 -14.03766 -13.87404 -13.61711 -13.52960 -13.37366 -13.17199 -13.00728 -12.77870 -12.69808 -12.63365 -12.40286 -12.16414 -11.97828 -11.81764 -11.78524 -11.64066 -11.53424 -11.24952 -10.90697 -10.88650 -10.71368 -10.12532 -10.00065 -9.50880 -5.12112 -0.36627 0.33336 0.67684 0.92106 1.17167 1.21388 1.49567 1.72677 1.85695 2.15971 2.40613 3.24517 3.40591 3.53062 3.56792 3.58876 3.77088 3.82899 3.85198 3.95362 4.03021 4.14055 4.18396 4.22284 4.27980 4.32782 4.35388 4.39604 4.45406 4.47180 4.48114 4.55854 4.58183 4.67763 4.71101 4.79155 4.84475 4.96820 5.03739 5.05591 5.11414 5.13325 5.18422 5.22057 5.29513 5.38538 5.47009 5.50947 6.28997 6.47529 6.75893 7.24881 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.112 4.112 6 C -0.077 4.077 7 H 0.082 0.918 8 C -0.113 4.113 9 C -0.111 4.111 10 C -0.100 4.100 11 H 0.078 0.922 12 C 0.123 3.877 13 N -0.725 5.725 14 C 0.576 3.424 15 O -0.532 6.532 16 C -0.154 4.154 17 C -0.207 4.207 18 S 0.196 5.804 19 C -0.242 4.242 20 C -0.033 4.033 21 O -0.522 6.522 22 Si 0.650 3.350 23 C -0.053 4.053 24 C -0.112 4.112 25 C -0.122 4.122 26 H 0.063 0.937 27 H 0.102 0.898 28 H 0.064 0.936 29 H 0.106 0.894 30 H 0.107 0.893 31 H 0.067 0.933 32 H 0.068 0.932 33 H 0.069 0.931 34 H 0.069 0.931 35 H 0.071 0.929 36 H 0.070 0.930 37 H 0.398 0.602 38 H 0.170 0.830 39 H 0.128 0.872 40 H 0.377 0.623 41 H -0.234 1.234 42 H -0.238 1.238 43 H 0.157 0.843 44 H 0.068 0.932 45 H 0.060 0.940 46 H 0.080 0.920 47 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.587 -6.028 -2.718 7.101 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.149 4.149 6 C -0.096 4.096 7 H 0.100 0.900 8 C -0.150 4.150 9 C -0.149 4.149 10 C -0.119 4.119 11 H 0.096 0.904 12 C 0.000 4.000 13 N -0.377 5.377 14 C 0.362 3.638 15 O -0.409 6.409 16 C -0.172 4.172 17 C -0.345 4.345 18 S 0.462 5.538 19 C -0.358 4.358 20 C -0.145 4.145 21 O -0.329 6.329 22 Si 0.548 3.452 23 C -0.082 4.082 24 C -0.150 4.150 25 C -0.159 4.159 26 H 0.082 0.918 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.124 0.876 30 H 0.125 0.875 31 H 0.085 0.915 32 H 0.087 0.913 33 H 0.087 0.913 34 H 0.088 0.912 35 H 0.089 0.911 36 H 0.089 0.911 37 H 0.233 0.767 38 H 0.188 0.812 39 H 0.146 0.854 40 H 0.225 0.775 41 H -0.157 1.157 42 H -0.162 1.162 43 H 0.174 0.826 44 H 0.086 0.914 45 H 0.079 0.921 46 H 0.098 0.902 47 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -3.094 -4.865 -3.997 7.016 hybrid contribution 1.215 -0.590 1.202 1.808 sum -1.878 -5.455 -2.795 6.411 Atomic orbital electron populations 1.23294 0.75994 1.03924 1.02666 1.86516 1.23747 1.33617 1.84032 1.23876 0.92363 0.81337 0.72279 1.90664 1.67298 1.36154 1.44887 1.21532 0.87426 0.99953 1.06037 1.21052 0.95952 0.92658 0.99922 0.89956 1.21564 0.94267 0.96703 1.02489 1.21474 1.01222 0.95361 0.96815 1.21456 0.96705 0.94257 0.99463 0.90400 1.21463 1.01082 0.92665 0.84775 1.45848 1.63551 1.11259 1.17059 1.17604 0.78296 0.81521 0.86408 1.90829 1.42554 1.61618 1.45948 1.20275 1.06900 0.94878 0.95181 1.25785 1.04659 1.05111 0.98952 1.83143 1.57037 0.99582 1.13992 1.24738 1.10854 1.00858 0.99381 1.24410 0.86994 0.92761 1.10371 1.86652 1.18797 1.55205 1.72236 0.95254 0.90473 0.83829 0.75633 1.21068 0.97853 0.94012 0.95249 1.21581 0.94365 0.96785 1.02220 1.21751 1.02475 0.95306 0.96417 0.91808 0.87948 0.91773 0.87565 0.87463 0.91464 0.91281 0.91272 0.91211 0.91067 0.91136 0.76673 0.81219 0.85429 0.77469 1.15690 1.16248 0.82590 0.91374 0.92118 0.90168 0.92219 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.32 10.57 -39.27 -0.41 -0.73 16 3 C 0.46 0.41 7.68 36.01 0.28 0.69 16 4 O -0.50 -1.76 13.72 -18.75 -0.26 -2.02 16 5 C -0.11 0.25 5.29 -27.89 -0.15 0.10 16 6 C -0.08 0.14 1.84 -90.63 -0.17 -0.03 16 7 H 0.08 -0.02 7.96 -51.93 -0.41 -0.43 16 8 C -0.11 0.33 5.20 -26.73 -0.14 0.19 16 9 C -0.11 0.26 5.20 -26.73 -0.14 0.12 16 10 C -0.10 0.22 2.22 -90.62 -0.20 0.02 16 11 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 12 C 0.12 -0.03 5.07 -4.05 -0.02 -0.05 16 13 N -0.72 0.03 5.25 -61.46 -0.32 -0.30 16 14 C 0.58 1.83 7.79 -12.63 -0.10 1.73 16 15 O -0.53 -3.87 16.80 5.25 0.09 -3.78 16 16 C -0.15 -0.23 5.98 -104.63 -0.63 -0.86 16 17 C -0.21 0.25 10.38 29.93 0.31 0.56 16 18 S 0.20 -0.30 20.20 -107.50 -2.17 -2.47 16 19 C -0.24 -0.03 5.65 -36.18 -0.20 -0.24 16 20 C -0.03 0.01 2.94 36.00 0.11 0.12 16 21 O -0.52 -0.63 12.88 -35.23 -0.45 -1.08 16 22 Si 0.65 -0.88 30.92 -169.99 -5.26 -6.13 16 23 C -0.05 -0.10 9.95 -39.02 -0.39 -0.49 16 24 C -0.11 0.18 5.08 -26.70 -0.14 0.04 16 25 C -0.12 0.16 4.95 -26.70 -0.13 0.02 16 26 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 28 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 29 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 30 H 0.11 -0.38 8.14 -51.93 -0.42 -0.81 16 31 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 34 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 36 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.40 -1.05 6.15 -40.82 -0.25 -1.30 16 38 H 0.17 -0.69 7.01 -52.49 -0.37 -1.06 16 39 H 0.13 -0.13 7.96 -51.93 -0.41 -0.55 16 40 H 0.38 -0.67 8.70 45.56 0.40 -0.27 16 41 H -0.23 -0.36 7.11 56.52 0.40 0.04 16 42 H -0.24 -0.01 7.11 56.52 0.40 0.39 16 43 H 0.16 0.46 8.06 -52.48 -0.42 0.03 16 44 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 45 H 0.06 -0.13 7.18 -51.93 -0.37 -0.50 16 46 H 0.08 0.07 5.96 -51.93 -0.31 -0.24 16 47 H 0.06 -0.12 8.14 -51.93 -0.42 -0.55 16 LS Contribution 393.27 15.07 5.93 5.93 Total: 0.00 -8.82 393.27 -10.77 -19.59 By element: Atomic # 1 Polarization: -4.69 SS G_CDS: -7.27 Total: -11.96 kcal Atomic # 6 Polarization: 3.60 SS G_CDS: -0.64 Total: 2.96 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.32 Total: -0.30 kcal Atomic # 8 Polarization: -6.58 SS G_CDS: -1.04 Total: -7.62 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.26 Total: -6.13 kcal Atomic # 16 Polarization: -0.30 SS G_CDS: -2.17 Total: -2.47 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -8.82 -10.77 -19.59 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16902906_6894386.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.709 kcal (2) G-P(sol) polarization free energy of solvation -8.821 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.530 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.771 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.592 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.301 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds