Wall clock time and date at job start Sun Mar 7 2021 07:11:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43198 * 179.97438 * 2 1 4 4 C 1.39941 * 120.60365 * 328.58783 * 3 2 1 5 5 C 1.38410 * 118.34593 * 180.02562 * 4 3 2 6 6 C 1.38279 * 119.46066 * 0.02562 * 5 4 3 7 7 N 1.31933 * 121.19039 * 359.73760 * 6 5 4 8 8 C 1.32170 * 121.80516 * 0.53173 * 7 6 5 9 9 O 1.35485 * 119.80334 * 179.75505 * 8 7 6 10 10 C 1.42903 * 116.99661 * 359.72074 * 9 8 7 11 11 H 1.09001 * 109.46938 * 30.00336 * 10 9 8 12 12 C 1.53000 * 109.46726 * 150.00068 * 10 9 8 13 13 C 1.52997 * 109.47060 * 180.02562 * 12 10 9 14 14 C 1.53006 * 109.47127 * 300.00449 * 13 12 10 15 15 H 1.09001 * 109.47002 * 299.99574 * 14 13 12 16 16 N 1.46504 * 109.46883 * 180.02562 * 14 13 12 17 17 C 1.34773 * 120.00111 * 84.99828 * 16 14 13 18 18 O 1.21566 * 120.00034 * 359.97438 * 17 16 14 19 19 C 1.47693 * 119.99782 * 179.97438 * 17 16 14 20 20 C 1.39826 * 120.16729 * 179.97438 * 19 17 16 21 21 F 1.35109 * 120.10770 * 359.97438 * 20 19 17 22 22 C 1.38320 * 119.78154 * 180.02562 * 20 19 17 23 23 C 1.38199 * 120.11487 * 0.02562 * 22 20 19 24 24 C 1.38454 * 120.34256 * 359.97438 * 23 22 20 25 25 C 1.50699 * 119.89300 * 179.97438 * 24 23 22 26 26 O 1.42896 * 109.47592 * 119.99929 * 25 24 23 27 27 Si 1.86307 * 109.47153 * 359.97438 * 25 24 23 28 28 C 1.37859 * 120.21981 * 359.76739 * 24 23 22 29 29 C 1.52997 * 109.47164 * 59.99836 * 14 13 12 30 30 C 1.52996 * 109.47176 * 270.00110 * 10 9 8 31 31 H 1.08008 * 120.82881 * 0.02562 * 4 3 2 32 32 H 1.08005 * 120.27137 * 180.02562 * 5 4 3 33 33 H 1.08003 * 119.40260 * 179.97438 * 6 5 4 34 34 H 1.09002 * 109.47398 * 300.00244 * 12 10 9 35 35 H 1.09001 * 109.47194 * 60.00425 * 12 10 9 36 36 H 1.08998 * 109.47533 * 59.99948 * 13 12 10 37 37 H 1.08996 * 109.47853 * 180.02562 * 13 12 10 38 38 H 0.97003 * 119.99624 * 264.99510 * 16 14 13 39 39 H 1.07997 * 119.94131 * 180.02562 * 22 20 19 40 40 H 1.08003 * 119.83140 * 179.97438 * 23 22 20 41 41 H 1.09000 * 109.47481 * 240.00382 * 25 24 23 42 42 H 0.96697 * 114.00415 * 179.97438 * 26 25 24 43 43 H 1.48500 * 109.99370 * 59.99931 * 27 25 24 44 44 H 1.48499 * 110.00255 * 181.31816 * 27 25 24 45 45 H 1.07996 * 120.06422 * 180.25054 * 28 24 23 46 46 H 1.09002 * 109.47045 * 180.02562 * 29 14 13 47 47 H 1.09001 * 109.47375 * 59.99966 * 29 14 13 48 48 H 1.08992 * 109.47554 * 299.99965 * 30 10 9 49 49 H 1.09004 * 109.47108 * 60.00216 * 30 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2809 -1.0270 0.6278 5 6 4.6639 -0.9796 0.5998 6 6 5.2956 0.0709 -0.0403 7 7 4.6037 1.0271 -0.6299 8 6 3.2821 1.0328 -0.6284 9 8 2.6123 2.0378 -1.2424 10 6 3.3985 3.0569 -1.8633 11 1 4.3421 2.6308 -2.2041 12 6 2.6366 3.6310 -3.0594 13 6 3.4785 4.7217 -3.7245 14 6 3.7583 5.8369 -2.7150 15 1 2.8149 6.2634 -2.3741 16 7 4.5640 6.8815 -3.3521 17 6 3.9635 7.8546 -4.0656 18 8 2.7534 7.8652 -4.1808 19 6 4.7758 8.9079 -4.7074 20 6 4.1565 9.9189 -5.4488 21 9 2.8121 9.9355 -5.5814 22 6 4.9250 10.9011 -6.0470 23 6 6.3004 10.8833 -5.9128 24 6 6.9187 9.8846 -5.1798 25 6 8.4192 9.8746 -5.0405 26 8 8.7700 9.9675 -3.6584 27 14 9.1382 11.3248 -5.9631 28 6 6.1659 8.9018 -4.5733 29 6 4.5202 5.2627 -1.5189 30 6 3.6776 4.1719 -0.8535 31 1 2.7648 -1.8370 1.1218 32 1 5.2451 -1.7567 1.0741 33 1 6.3748 0.1072 -0.0611 34 1 2.4376 2.8367 -3.7788 35 1 1.6930 4.0572 -2.7185 36 1 4.4219 4.2953 -4.0655 37 1 2.9356 5.1311 -4.5764 38 1 5.5296 6.8728 -3.2604 39 1 4.4494 11.6834 -6.6199 40 1 6.8960 11.6523 -6.3821 41 1 8.8164 8.9479 -5.4547 42 1 9.7228 9.9662 -3.4934 43 1 8.6045 12.5947 -5.4084 44 1 10.6195 11.3084 -5.8601 45 1 6.6505 8.1263 -3.9987 46 1 4.7191 6.0570 -0.7995 47 1 5.4636 4.8361 -1.8598 48 1 2.7342 4.5980 -0.5126 49 1 4.2205 3.7628 -0.0013 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16903866_12335834.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:11:40 Heat of formation + Delta-G solvation = -49.667850 kcal Electronic energy + Delta-G solvation = -36028.112399 eV Core-core repulsion = 31029.883758 eV Total energy + Delta-G solvation = -4998.228642 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.147 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -50.01725 -42.00374 -41.46175 -40.29898 -39.63598 -38.09695 -37.73926 -37.56243 -35.16741 -33.72993 -32.90509 -32.41352 -32.00052 -31.73341 -29.63797 -26.59601 -25.81375 -25.62599 -24.71159 -23.92137 -23.42190 -22.43230 -21.64102 -21.10793 -20.27066 -19.40770 -19.18440 -18.59894 -18.25403 -18.02791 -17.86109 -17.04935 -16.90909 -16.85497 -16.45596 -16.20379 -16.13815 -15.88339 -15.66361 -15.64696 -15.27869 -15.06558 -14.80580 -14.67953 -14.46110 -14.41127 -14.30605 -14.15904 -14.06419 -13.98605 -13.92470 -13.80847 -13.37703 -13.31603 -13.09741 -12.94431 -12.83040 -12.72548 -12.43616 -12.27806 -12.22450 -11.83425 -11.54602 -11.36157 -11.16054 -10.97151 -10.72820 -10.52495 -10.42739 -10.13954 -9.78942 -9.59179 -4.88243 -0.50192 -0.41591 -0.02267 0.22191 1.31213 1.50188 1.59727 1.64534 1.73743 1.88867 1.96180 2.01019 2.45651 2.71453 2.79888 3.04853 3.26228 3.26910 3.38898 3.49223 3.56054 3.59692 3.73813 3.75311 3.88922 3.96989 4.01788 4.03550 4.08193 4.14774 4.16860 4.24829 4.26485 4.34882 4.37571 4.46667 4.55037 4.59561 4.71855 4.77085 4.80316 4.85487 4.93660 4.94413 4.95507 5.00696 5.02270 5.10296 5.15397 5.16859 5.18159 5.36577 5.45115 5.59077 6.09263 6.35482 6.36217 6.63085 6.71442 7.04403 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.467 5.467 2 C 0.283 3.717 3 C -0.129 4.129 4 C 0.014 3.986 5 C -0.198 4.198 6 C 0.174 3.826 7 N -0.547 5.547 8 C 0.357 3.643 9 O -0.317 6.317 10 C 0.093 3.907 11 H 0.107 0.893 12 C -0.113 4.113 13 C -0.115 4.115 14 C 0.143 3.857 15 H 0.064 0.936 16 N -0.703 5.703 17 C 0.555 3.445 18 O -0.571 6.571 19 C -0.189 4.189 20 C 0.131 3.869 21 F -0.137 7.137 22 C -0.153 4.153 23 C -0.054 4.054 24 C -0.096 4.096 25 C -0.076 4.076 26 O -0.555 6.555 27 Si 0.753 3.247 28 C -0.023 4.023 29 C -0.109 4.109 30 C -0.126 4.126 31 H 0.172 0.828 32 H 0.186 0.814 33 H 0.204 0.796 34 H 0.075 0.925 35 H 0.058 0.942 36 H 0.092 0.908 37 H 0.056 0.944 38 H 0.416 0.584 39 H 0.167 0.833 40 H 0.165 0.835 41 H 0.112 0.888 42 H 0.399 0.601 43 H -0.298 1.298 44 H -0.287 1.287 45 H 0.163 0.837 46 H 0.084 0.916 47 H 0.100 0.900 48 H 0.058 0.942 49 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 16.450 -3.168 -0.790 16.771 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.144 5.144 2 C -0.032 4.032 3 C -0.136 4.136 4 C -0.013 4.013 5 C -0.217 4.217 6 C 0.018 3.982 7 N -0.271 5.271 8 C 0.175 3.825 9 O -0.223 6.223 10 C 0.038 3.962 11 H 0.125 0.875 12 C -0.152 4.152 13 C -0.153 4.153 14 C 0.039 3.961 15 H 0.082 0.918 16 N -0.355 5.355 17 C 0.343 3.657 18 O -0.451 6.451 19 C -0.193 4.193 20 C 0.111 3.889 21 F -0.115 7.115 22 C -0.171 4.171 23 C -0.072 4.072 24 C -0.096 4.096 25 C -0.185 4.185 26 O -0.366 6.366 27 Si 0.659 3.341 28 C -0.042 4.042 29 C -0.147 4.147 30 C -0.165 4.165 31 H 0.190 0.810 32 H 0.203 0.797 33 H 0.221 0.779 34 H 0.094 0.906 35 H 0.077 0.923 36 H 0.111 0.889 37 H 0.075 0.925 38 H 0.255 0.745 39 H 0.185 0.815 40 H 0.182 0.818 41 H 0.130 0.870 42 H 0.250 0.750 43 H -0.226 1.226 44 H -0.214 1.214 45 H 0.180 0.820 46 H 0.103 0.897 47 H 0.118 0.882 48 H 0.077 0.923 49 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 13.761 -1.686 -1.215 13.917 hybrid contribution -0.028 -0.558 1.368 1.478 sum 13.733 -2.244 0.154 13.916 Atomic orbital electron populations 1.81286 1.13455 1.09198 1.10442 1.25593 0.92601 0.92554 0.92428 1.16153 0.84374 1.00779 1.12303 1.21926 0.94977 0.94035 0.90406 1.22401 0.93752 1.02037 1.03529 1.23492 1.02013 0.86202 0.86503 1.67497 1.04879 1.30494 1.24192 1.19859 0.88244 0.86113 0.88235 1.86297 1.36712 1.32844 1.66489 1.22585 0.95458 0.85769 0.92436 0.87472 1.21542 0.99040 0.98434 0.96147 1.21768 1.01154 0.94574 0.97837 1.21056 0.95061 0.87021 0.92996 0.91782 1.45762 1.11512 1.26162 1.52061 1.18308 0.86983 0.81774 0.78592 1.90846 1.15752 1.76645 1.61871 1.20064 0.95391 0.98275 1.05577 1.18213 0.77220 0.95975 0.97539 1.91560 1.30264 1.95979 1.93728 1.21351 0.94256 0.99250 1.02253 1.21329 0.93547 0.96773 0.95502 1.19514 0.95225 0.95631 0.99232 1.24855 0.93728 1.11934 0.88026 1.86528 1.30777 1.96387 1.22885 0.94284 0.77199 0.74491 0.88122 1.21205 0.89667 0.98209 0.95104 1.21671 0.99247 0.98034 0.95710 1.21850 1.00742 0.95365 0.98498 0.81044 0.79708 0.77914 0.90610 0.92315 0.88941 0.92523 0.74482 0.81512 0.81814 0.87044 0.74998 1.22564 1.21392 0.82007 0.89737 0.88166 0.92348 0.90025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -6.86 18.54 19.00 0.35 -6.51 16 2 C 0.28 2.42 14.91 88.33 1.32 3.73 16 3 C -0.13 -0.20 5.76 -21.10 -0.12 -0.32 16 4 C 0.01 -0.09 9.90 22.72 0.23 0.14 16 5 C -0.20 2.18 10.09 22.32 0.23 2.40 16 6 C 0.17 -1.60 11.16 84.69 0.95 -0.65 16 7 N -0.55 1.27 8.64 -307.96 -2.66 -1.39 16 8 C 0.36 0.83 7.47 85.16 0.64 1.47 16 9 O -0.32 -1.80 9.20 -87.85 -0.81 -2.60 16 10 C 0.09 0.07 2.38 30.59 0.07 0.14 16 11 H 0.11 -0.16 6.98 -2.39 -0.02 -0.17 16 12 C -0.11 -0.26 5.57 30.59 0.17 -0.09 16 13 C -0.11 -0.08 5.49 30.60 0.17 0.09 16 14 C 0.14 0.10 2.45 44.99 0.11 0.21 16 15 H 0.06 0.46 7.58 -2.39 -0.02 0.44 16 16 N -0.70 0.16 5.03 -445.55 -2.24 -2.08 16 17 C 0.56 4.44 7.73 86.74 0.67 5.11 16 18 O -0.57 -10.21 15.00 -3.92 -0.06 -10.27 16 19 C -0.19 -0.83 5.88 -20.05 -0.12 -0.95 16 20 C 0.13 0.87 7.29 22.67 0.17 1.04 16 21 F -0.14 -1.87 15.55 44.97 0.70 -1.17 16 22 C -0.15 0.06 10.01 22.28 0.22 0.28 16 23 C -0.05 0.22 8.66 22.31 0.19 0.41 16 24 C -0.10 0.37 5.42 -19.90 -0.11 0.27 16 25 C -0.08 0.60 2.81 71.24 0.20 0.80 16 26 O -0.56 2.95 12.74 -148.98 -1.90 1.05 16 27 Si 0.75 -5.59 29.78 68.60 2.04 -3.55 16 28 C -0.02 0.06 9.09 22.52 0.20 0.26 16 29 C -0.11 0.51 5.39 30.61 0.17 0.67 16 30 C -0.13 0.13 5.55 30.61 0.17 0.30 16 31 H 0.17 -1.86 8.06 -2.91 -0.02 -1.88 16 32 H 0.19 -3.28 8.06 -2.91 -0.02 -3.30 16 33 H 0.20 -3.33 8.06 -2.91 -0.02 -3.36 16 34 H 0.08 0.18 8.14 -2.39 -0.02 0.16 16 35 H 0.06 0.35 8.14 -2.39 -0.02 0.33 16 36 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 37 H 0.06 0.33 8.14 -2.39 -0.02 0.31 16 38 H 0.42 -3.07 6.64 -92.71 -0.62 -3.68 16 39 H 0.17 -0.77 8.06 -2.91 -0.02 -0.80 16 40 H 0.16 -1.51 4.86 -2.91 -0.01 -1.53 16 41 H 0.11 -1.46 7.96 -2.39 -0.02 -1.48 16 42 H 0.40 -5.07 8.74 -74.06 -0.65 -5.72 16 43 H -0.30 -0.10 7.11 99.48 0.71 0.60 16 44 H -0.29 0.71 7.11 99.48 0.71 1.42 16 45 H 0.16 -1.36 6.41 -2.91 -0.02 -1.38 16 46 H 0.08 -0.45 8.14 -2.39 -0.02 -0.46 16 47 H 0.10 -0.91 8.14 -2.39 -0.02 -0.93 16 48 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 49 H 0.08 -0.13 8.14 -2.38 -0.02 -0.15 16 Total: 0.00 -33.76 418.25 0.76 -33.00 By element: Atomic # 1 Polarization: -21.62 SS G_CDS: -0.18 Total: -21.81 kcal Atomic # 6 Polarization: 9.82 SS G_CDS: 5.52 Total: 15.33 kcal Atomic # 7 Polarization: -5.43 SS G_CDS: -4.55 Total: -9.98 kcal Atomic # 8 Polarization: -9.06 SS G_CDS: -2.76 Total: -11.82 kcal Atomic # 9 Polarization: -1.87 SS G_CDS: 0.70 Total: -1.17 kcal Atomic # 14 Polarization: -5.59 SS G_CDS: 2.04 Total: -3.55 kcal Total: -33.76 0.76 -33.00 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16903866_12335834.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.672 kcal (2) G-P(sol) polarization free energy of solvation -33.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.761 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.996 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.668 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds