Wall clock time and date at job start Sun Mar 7 2021 07:12:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.43195 * 179.97438 * 2 1 4 4 C 1.39950 * 120.59797 * 349.65586 * 3 2 1 5 5 C 1.38413 * 118.34166 * 179.97438 * 4 3 2 6 6 C 1.38277 * 119.46429 * 0.02562 * 5 4 3 7 7 N 1.31943 * 121.18831 * 359.74068 * 6 5 4 8 8 C 1.32175 * 121.80305 * 0.52805 * 7 6 5 9 9 O 1.35479 * 119.79814 * 179.75655 * 8 7 6 10 10 C 1.42895 * 117.00302 * 359.72002 * 9 8 7 11 11 H 1.09002 * 109.47333 * 30.00285 * 10 9 8 12 12 C 1.53002 * 109.47308 * 150.00471 * 10 9 8 13 13 C 1.53000 * 109.47233 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.47060 * 299.99657 * 13 12 10 15 15 H 1.09002 * 109.47153 * 300.00319 * 14 13 12 16 16 N 1.46500 * 109.47473 * 180.02562 * 14 13 12 17 17 C 1.34777 * 120.00270 * 154.99797 * 16 14 13 18 18 O 1.21699 * 119.99595 * 0.02562 * 17 16 14 19 19 C 1.46427 * 120.00351 * 180.02562 * 17 16 14 20 20 C 1.34800 * 120.00181 * 180.02562 * 19 17 16 21 21 C 1.47207 * 120.00053 * 180.02562 * 20 19 17 22 22 C 1.39840 * 120.16890 * 359.71905 * 21 20 19 23 23 C 1.37892 * 119.82490 * 179.79189 * 22 21 20 24 24 C 1.38399 * 120.17213 * 0.46735 * 23 22 21 25 25 C 1.50695 * 119.82860 * 179.76302 * 24 23 22 26 26 O 1.42898 * 109.47454 * 245.02049 * 25 24 23 27 27 Si 1.86300 * 109.47167 * 5.02364 * 25 24 23 28 28 C 1.38409 * 120.34447 * 359.78463 * 24 23 22 29 29 C 1.37884 * 120.16891 * 359.97438 * 28 24 23 30 30 C 1.52999 * 109.47317 * 59.99960 * 14 13 12 31 31 C 1.52997 * 109.47503 * 270.00445 * 10 9 8 32 32 H 1.07994 * 120.83072 * 359.95288 * 4 3 2 33 33 H 1.08000 * 120.27212 * 180.02562 * 5 4 3 34 34 H 1.07996 * 119.41290 * 179.97438 * 6 5 4 35 35 H 1.08992 * 109.47063 * 60.00217 * 12 10 9 36 36 H 1.09004 * 109.46733 * 299.99930 * 12 10 9 37 37 H 1.09002 * 109.47398 * 59.99826 * 13 12 10 38 38 H 1.09001 * 109.47194 * 180.02562 * 13 12 10 39 39 H 0.97000 * 119.99491 * 335.00093 * 16 14 13 40 40 H 1.08003 * 119.99459 * 359.97438 * 19 17 16 41 41 H 1.08003 * 120.00360 * 359.97438 * 20 19 17 42 42 H 1.08004 * 120.08590 * 0.02562 * 22 21 20 43 43 H 1.08002 * 119.91199 * 180.22926 * 23 22 21 44 44 H 1.09006 * 109.46897 * 125.01854 * 25 24 23 45 45 H 0.96698 * 113.99999 * 60.00153 * 26 25 24 46 46 H 1.48498 * 110.00038 * 58.67923 * 27 25 24 47 47 H 1.48499 * 110.00137 * 180.02562 * 27 25 24 48 48 H 1.07998 * 119.91595 * 179.97438 * 28 24 23 49 49 H 1.08005 * 120.08871 * 180.02562 * 29 28 24 50 50 H 1.09000 * 109.47486 * 180.02562 * 30 14 13 51 51 H 1.09002 * 109.46716 * 60.00091 * 30 14 13 52 52 H 1.09002 * 109.47153 * 299.99957 * 31 10 9 53 53 H 1.09001 * 109.47289 * 60.00040 * 31 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2809 -1.1841 0.2163 5 6 4.6639 -1.1300 0.2060 6 6 5.2956 0.0801 -0.0148 7 7 4.6037 1.1844 -0.2211 8 6 3.2819 1.1894 -0.2165 9 8 2.6123 2.3480 -0.4280 10 6 3.3984 3.5219 -0.6422 11 1 4.3415 3.2465 -1.1142 12 6 2.6358 4.4875 -1.5517 13 6 3.4777 5.7441 -1.7815 14 6 3.7587 6.4223 -0.4392 15 1 2.8157 6.6980 0.0330 16 7 4.5643 7.6260 -0.6592 17 6 4.5233 8.6366 0.2316 18 8 3.8172 8.5490 1.2189 19 6 5.3281 9.8398 0.0114 20 6 5.2874 10.8504 0.9025 21 6 6.0961 12.0603 0.6808 22 6 6.9123 12.1626 -0.4501 23 6 7.6635 13.3010 -0.6529 24 6 7.6187 14.3366 0.2641 25 6 8.4470 15.5749 0.0375 26 8 9.4332 15.6832 1.0659 27 14 9.2887 15.4641 -1.6209 28 6 6.8174 14.2406 1.3886 29 6 6.0565 13.1109 1.6029 30 6 4.5212 5.4569 0.4704 31 6 3.6789 4.1999 0.7003 32 1 2.7648 -2.1172 0.3874 33 1 5.2450 -2.0256 0.3691 34 1 6.3747 0.1215 -0.0223 35 1 1.6927 4.7629 -1.0797 36 1 2.4360 4.0044 -2.5082 37 1 4.4207 5.4684 -2.2537 38 1 2.9342 6.4322 -2.4290 39 1 5.1273 7.6955 -1.4461 40 1 5.9550 9.9173 -0.8647 41 1 4.6609 10.7728 1.7788 42 1 6.9512 11.3537 -1.1646 43 1 8.2915 13.3830 -1.5277 44 1 7.8013 16.4529 0.0593 45 1 10.0441 14.9346 1.1054 46 1 8.2749 15.3191 -2.6963 47 1 10.1093 16.6792 -1.8562 48 1 6.7880 15.0527 2.0999 49 1 5.4314 13.0375 2.4806 50 1 4.7210 5.9398 1.4269 51 1 5.4642 5.1812 -0.0018 52 1 2.7358 4.4753 1.1723 53 1 4.2222 3.5121 1.3482 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16903866_12360594.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:12:30 Heat of formation + Delta-G solvation = 4.545036 kcal Electronic energy + Delta-G solvation = -35475.498931 eV Core-core repulsion = 30665.311352 eV Total energy + Delta-G solvation = -4810.187578 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.173 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -41.98176 -41.13004 -40.55783 -39.80024 -38.12979 -37.74027 -37.71597 -35.05432 -34.93650 -33.72870 -32.23396 -32.00140 -31.85326 -31.30656 -29.71150 -27.09112 -25.74659 -25.03166 -24.20791 -23.96460 -23.73537 -22.74775 -21.80206 -21.36699 -20.46195 -20.12544 -19.39654 -18.80475 -18.15360 -17.93826 -17.56144 -16.91229 -16.85479 -16.52132 -16.27585 -16.18213 -16.09160 -15.87048 -15.55045 -15.29124 -15.10409 -15.03782 -14.91592 -14.74696 -14.53091 -14.40611 -14.30489 -14.17068 -14.15220 -13.96185 -13.84889 -13.78825 -13.33503 -13.29838 -13.12466 -13.03264 -12.96759 -12.73319 -12.24638 -12.24225 -12.13227 -12.05236 -11.71495 -11.56396 -11.34603 -11.30051 -11.03947 -10.97302 -10.72646 -10.43020 -10.12706 -9.97930 -9.59238 -9.23728 -4.99642 -0.54256 -0.41883 0.22085 0.39934 0.89753 1.31431 1.50559 1.65045 1.78124 1.89043 1.98399 2.18438 2.25131 2.71474 2.79748 2.82309 3.27131 3.48438 3.53546 3.58729 3.60085 3.69480 3.77269 3.82699 3.94108 3.95502 3.96513 4.03742 4.11397 4.16079 4.19479 4.22114 4.28209 4.32286 4.36302 4.37980 4.43661 4.47971 4.53477 4.59806 4.75497 4.84413 4.85083 4.94695 4.97984 4.98326 5.03463 5.05586 5.09679 5.10114 5.15634 5.21655 5.23210 5.38994 5.44899 5.47910 5.50501 5.60780 5.90614 6.09458 6.36401 6.57412 6.71435 6.76319 7.24711 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.465 5.465 2 C 0.283 3.717 3 C -0.129 4.129 4 C 0.014 3.986 5 C -0.198 4.198 6 C 0.173 3.827 7 N -0.549 5.549 8 C 0.356 3.644 9 O -0.316 6.316 10 C 0.092 3.908 11 H 0.106 0.894 12 C -0.114 4.114 13 C -0.109 4.109 14 C 0.142 3.858 15 H 0.062 0.938 16 N -0.705 5.705 17 C 0.541 3.459 18 O -0.594 6.594 19 C -0.205 4.205 20 C -0.024 4.024 21 C -0.080 4.080 22 C -0.093 4.093 23 C -0.119 4.119 24 C -0.113 4.113 25 C -0.080 4.080 26 O -0.557 6.557 27 Si 0.782 3.218 28 C -0.109 4.109 29 C -0.105 4.105 30 C -0.113 4.113 31 C -0.126 4.126 32 H 0.173 0.827 33 H 0.186 0.814 34 H 0.202 0.798 35 H 0.062 0.938 36 H 0.085 0.915 37 H 0.099 0.901 38 H 0.089 0.911 39 H 0.420 0.580 40 H 0.168 0.832 41 H 0.118 0.882 42 H 0.161 0.839 43 H 0.153 0.847 44 H 0.104 0.896 45 H 0.396 0.604 46 H -0.283 1.283 47 H -0.303 1.303 48 H 0.126 0.874 49 H 0.133 0.867 50 H 0.051 0.949 51 H 0.089 0.911 52 H 0.053 0.947 53 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.700 -4.910 -5.458 13.813 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.142 5.142 2 C -0.031 4.031 3 C -0.136 4.136 4 C -0.013 4.013 5 C -0.217 4.217 6 C 0.017 3.983 7 N -0.273 5.273 8 C 0.175 3.825 9 O -0.222 6.222 10 C 0.037 3.963 11 H 0.124 0.876 12 C -0.153 4.153 13 C -0.147 4.147 14 C 0.037 3.963 15 H 0.080 0.920 16 N -0.356 5.356 17 C 0.331 3.669 18 O -0.476 6.476 19 C -0.225 4.225 20 C -0.044 4.044 21 C -0.081 4.081 22 C -0.111 4.111 23 C -0.136 4.136 24 C -0.114 4.114 25 C -0.190 4.190 26 O -0.365 6.365 27 Si 0.688 3.312 28 C -0.127 4.127 29 C -0.123 4.123 30 C -0.152 4.152 31 C -0.164 4.164 32 H 0.190 0.810 33 H 0.203 0.797 34 H 0.219 0.781 35 H 0.081 0.919 36 H 0.104 0.896 37 H 0.117 0.883 38 H 0.108 0.892 39 H 0.258 0.742 40 H 0.185 0.815 41 H 0.136 0.864 42 H 0.178 0.822 43 H 0.170 0.830 44 H 0.121 0.879 45 H 0.246 0.754 46 H -0.209 1.209 47 H -0.232 1.232 48 H 0.144 0.856 49 H 0.151 0.849 50 H 0.070 0.930 51 H 0.107 0.893 52 H 0.072 0.928 53 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 9.367 -3.207 -5.633 11.391 hybrid contribution -0.870 -0.072 0.781 1.171 sum 8.497 -3.279 -4.852 10.320 Atomic orbital electron populations 1.81281 1.13372 1.08517 1.11047 1.25553 0.92547 0.92646 0.92385 1.16147 0.84454 0.94719 1.18259 1.21932 0.94924 0.95948 0.88516 1.22395 0.93821 1.01315 1.04197 1.23476 1.01980 0.86093 0.86787 1.67503 1.05031 1.33543 1.21187 1.19867 0.88192 0.85314 0.89116 1.86289 1.36657 1.15356 1.83916 1.22610 0.95762 0.81541 0.96414 0.87609 1.21579 0.99034 0.94791 0.99854 1.21680 1.02048 0.95548 0.95393 1.20978 0.94151 0.84259 0.96864 0.91997 1.45769 1.47087 1.16469 1.26276 1.18792 0.81484 0.84306 0.82276 1.90827 1.43639 1.82305 1.30841 1.23027 1.03205 0.93148 1.03114 1.22345 0.93522 0.91008 0.97528 1.19119 0.98503 0.94030 0.96407 1.21681 0.94406 0.98499 0.96494 1.21187 1.00125 0.93151 0.99186 1.20616 0.98368 0.96640 0.95739 1.25285 0.92949 0.97051 1.03690 1.86481 1.45213 1.49358 1.55416 0.93736 0.81013 0.84513 0.71974 1.21067 0.95942 0.98153 0.97529 1.21596 0.98621 0.92977 0.99094 1.21745 0.99406 0.94126 0.99929 1.21837 1.00323 0.97247 0.97041 0.80959 0.79714 0.78087 0.91940 0.89610 0.88253 0.89202 0.74184 0.81489 0.86356 0.82158 0.82967 0.87883 0.75430 1.20934 1.23152 0.85580 0.84873 0.92974 0.89271 0.92830 0.91330 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -6.51 18.54 19.00 0.35 -6.16 16 2 C 0.28 2.29 14.91 88.33 1.32 3.60 16 3 C -0.13 -0.19 5.76 -21.11 -0.12 -0.31 16 4 C 0.01 -0.09 9.90 22.73 0.23 0.14 16 5 C -0.20 2.09 10.09 22.32 0.23 2.32 16 6 C 0.17 -1.45 11.16 84.69 0.95 -0.51 16 7 N -0.55 0.87 8.64 -307.97 -2.66 -1.79 16 8 C 0.36 0.89 7.47 85.16 0.64 1.53 16 9 O -0.32 -1.64 9.20 -87.79 -0.81 -2.45 16 10 C 0.09 0.02 2.38 30.59 0.07 0.09 16 11 H 0.11 -0.19 6.98 -2.39 -0.02 -0.20 16 12 C -0.11 0.23 5.57 30.60 0.17 0.40 16 13 C -0.11 0.68 5.39 30.59 0.16 0.84 16 14 C 0.14 -0.16 2.45 44.99 0.11 -0.05 16 15 H 0.06 0.34 7.58 -2.39 -0.02 0.32 16 16 N -0.71 2.44 5.07 -446.76 -2.27 0.17 16 17 C 0.54 1.75 7.71 86.38 0.67 2.42 16 18 O -0.59 -8.02 15.89 -4.35 -0.07 -8.09 16 19 C -0.20 0.49 9.41 23.61 0.22 0.71 16 20 C -0.02 -0.01 9.46 23.84 0.23 0.21 16 21 C -0.08 0.06 5.87 -20.15 -0.12 -0.06 16 22 C -0.09 0.44 9.41 22.58 0.21 0.66 16 23 C -0.12 0.55 8.65 22.23 0.19 0.75 16 24 C -0.11 0.16 5.36 -19.79 -0.11 0.05 16 25 C -0.08 0.13 2.80 71.23 0.20 0.32 16 26 O -0.56 0.23 12.83 -148.98 -1.91 -1.68 16 27 Si 0.78 -3.13 29.78 68.60 2.04 -1.08 16 28 C -0.11 -0.08 9.66 22.23 0.21 0.14 16 29 C -0.10 -0.06 9.80 22.57 0.22 0.16 16 30 C -0.11 0.04 5.50 30.61 0.17 0.21 16 31 C -0.13 -0.20 5.55 30.61 0.17 -0.03 16 32 H 0.17 -1.87 8.06 -2.91 -0.02 -1.90 16 33 H 0.19 -3.20 8.06 -2.91 -0.02 -3.22 16 34 H 0.20 -3.10 8.06 -2.91 -0.02 -3.12 16 35 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 36 H 0.09 -0.26 8.14 -2.39 -0.02 -0.28 16 37 H 0.10 -1.04 8.14 -2.39 -0.02 -1.06 16 38 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 39 H 0.42 -4.63 8.58 -92.71 -0.80 -5.43 16 40 H 0.17 -1.77 6.07 -2.91 -0.02 -1.79 16 41 H 0.12 0.48 7.52 -2.91 -0.02 0.46 16 42 H 0.16 -1.79 6.17 -2.91 -0.02 -1.81 16 43 H 0.15 -1.48 4.88 -2.91 -0.01 -1.50 16 44 H 0.10 0.02 7.96 -2.38 -0.02 0.00 16 45 H 0.40 -3.45 8.70 -74.06 -0.64 -4.10 16 46 H -0.28 -0.08 7.11 99.48 0.71 0.63 16 47 H -0.30 -1.28 7.11 99.48 0.71 -0.58 16 48 H 0.13 0.07 8.06 -2.91 -0.02 0.04 16 49 H 0.13 -0.14 8.06 -2.91 -0.02 -0.16 16 50 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 51 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 52 H 0.05 0.29 8.14 -2.39 -0.02 0.27 16 53 H 0.07 0.18 8.14 -2.39 -0.02 0.16 16 Total: 0.00 -31.78 448.30 0.27 -31.51 By element: Atomic # 1 Polarization: -23.60 SS G_CDS: -0.42 Total: -24.02 kcal Atomic # 6 Polarization: 7.58 SS G_CDS: 6.01 Total: 13.59 kcal Atomic # 7 Polarization: -3.20 SS G_CDS: -4.57 Total: -7.78 kcal Atomic # 8 Polarization: -9.43 SS G_CDS: -2.79 Total: -12.22 kcal Atomic # 14 Polarization: -3.13 SS G_CDS: 2.04 Total: -1.08 kcal Total: -31.78 0.27 -31.51 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16903866_12360594.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.060 kcal (2) G-P(sol) polarization free energy of solvation -31.784 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.515 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.545 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds