Wall clock time and date at job start Sun Mar 7 2021 07:15:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.39945 * 120.59773 * 149.04187 * 3 2 1 5 5 C 1.38413 * 118.34263 * 179.70169 * 4 3 2 6 6 C 1.38279 * 119.46120 * 0.28172 * 5 4 3 7 7 N 1.31939 * 121.18836 * 359.97438 * 6 5 4 8 8 C 1.32167 * 121.81103 * 359.97438 * 7 6 5 9 9 O 1.35476 * 119.80658 * 180.02562 * 8 7 6 10 10 C 1.42899 * 116.99661 * 0.02562 * 9 8 7 11 11 H 1.09002 * 109.47182 * 329.99121 * 10 9 8 12 12 C 1.52995 * 109.47767 * 89.99589 * 10 9 8 13 13 C 1.52994 * 109.47536 * 179.97438 * 12 10 9 14 14 C 1.53005 * 109.47108 * 299.99959 * 13 12 10 15 15 H 1.09002 * 109.46867 * 299.99907 * 14 13 12 16 16 N 1.46497 * 109.47110 * 180.02562 * 14 13 12 17 17 C 1.34774 * 120.00294 * 84.99909 * 16 14 13 18 18 O 1.21597 * 119.99842 * 359.97438 * 17 16 14 19 19 C 1.47541 * 120.00348 * 180.02562 * 17 16 14 20 20 C 1.40133 * 120.19341 * 179.72812 * 19 17 16 21 21 O 1.35658 * 120.14789 * 359.97438 * 20 19 17 22 22 C 1.38705 * 119.69866 * 179.77081 * 20 19 17 23 23 C 1.38054 * 120.08391 * 0.49810 * 22 20 19 24 24 C 1.50705 * 119.80411 * 179.72598 * 23 22 20 25 25 O 1.42906 * 109.46959 * 65.02143 * 24 23 22 26 26 Si 1.86297 * 109.46951 * 185.02239 * 24 23 22 27 27 C 1.38543 * 120.39122 * 359.74955 * 23 22 20 28 28 C 1.37787 * 120.29882 * 359.97438 * 27 23 22 29 29 C 1.52992 * 109.47088 * 59.99953 * 14 13 12 30 30 C 1.53004 * 109.47187 * 300.00028 * 29 14 13 31 31 H 1.08002 * 120.83269 * 359.97438 * 4 3 2 32 32 H 1.07994 * 120.27264 * 180.25563 * 5 4 3 33 33 H 1.07997 * 119.40557 * 180.02562 * 6 5 4 34 34 H 1.09002 * 109.47101 * 300.00285 * 12 10 9 35 35 H 1.09002 * 109.47151 * 59.99514 * 12 10 9 36 36 H 1.08998 * 109.47053 * 180.02562 * 13 12 10 37 37 H 1.08997 * 109.47265 * 60.00160 * 13 12 10 38 38 H 0.97007 * 119.99957 * 265.00337 * 16 14 13 39 39 H 0.96703 * 114.00004 * 90.00670 * 21 20 19 40 40 H 1.07999 * 119.95983 * 180.22910 * 22 20 19 41 41 H 1.08996 * 109.47243 * 305.02613 * 24 23 22 42 42 H 0.96698 * 113.99689 * 60.00091 * 25 24 23 43 43 H 1.48499 * 110.00090 * 58.68045 * 26 24 23 44 44 H 1.48504 * 109.99968 * 180.02562 * 26 24 23 45 45 H 1.07999 * 119.84881 * 180.02562 * 27 23 22 46 46 H 1.08004 * 120.04271 * 180.02562 * 28 27 23 47 47 H 1.08998 * 109.47559 * 180.02562 * 29 14 13 48 48 H 1.08999 * 109.47543 * 59.99749 * 29 14 13 49 49 H 1.08997 * 109.47241 * 299.99798 * 30 29 14 50 50 H 1.08998 * 109.47055 * 179.97438 * 30 29 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2799 1.0339 -0.6197 5 6 4.6630 0.9911 -0.5862 6 6 5.2957 -0.0631 0.0466 7 7 4.6047 -1.0297 0.6201 8 6 3.2830 -1.0371 0.6181 9 8 2.6143 -2.0500 1.2200 10 6 3.4014 -3.0719 1.8349 11 1 4.3466 -3.1729 1.3014 12 6 3.6760 -2.6967 3.2925 13 6 4.5182 -3.7911 3.9509 14 6 3.7591 -5.1186 3.9003 15 1 2.8139 -5.0172 4.4337 16 7 4.5653 -6.1665 4.5314 17 6 4.5195 -6.3395 5.8672 18 8 3.8093 -5.6255 6.5487 19 6 5.3318 -7.3944 6.5028 20 6 5.2916 -7.5741 7.8920 21 8 4.5055 -6.7782 8.6594 22 6 6.0558 -8.5722 8.4783 23 6 6.8599 -9.3773 7.6966 24 6 7.6924 -10.4558 8.3409 25 8 6.8324 -11.4381 8.9220 26 14 8.7723 -11.2594 7.0530 27 6 6.9065 -9.1995 6.3234 28 6 6.1496 -8.2167 5.7237 29 6 3.4846 -5.4939 2.4428 30 6 2.6424 -4.3994 1.7843 31 1 2.7630 1.8469 -1.1079 32 1 5.2433 1.7745 -1.0509 33 1 6.3748 -0.0954 0.0725 34 1 4.2164 -1.7507 3.3285 35 1 2.7308 -2.5957 3.8259 36 1 4.7134 -3.5240 4.9895 37 1 5.4634 -3.8925 3.4177 38 1 5.1323 -6.7358 3.9878 39 1 3.6093 -7.1178 8.7889 40 1 6.0251 -8.7168 9.5481 41 1 8.3186 -10.0163 9.1173 42 1 6.2454 -11.8716 8.2875 43 1 9.6490 -10.2423 6.4188 44 1 9.5979 -12.3252 7.6756 45 1 7.5383 -9.8346 5.7203 46 1 6.1887 -8.0819 4.6528 47 1 2.9435 -6.4394 2.4067 48 1 4.4298 -5.5953 1.9094 49 1 1.6971 -4.2980 2.3175 50 1 2.4472 -4.6665 0.7457 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16903866_13422076.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:15:11 Heat of formation + Delta-G solvation = -46.204471 kcal Electronic energy + Delta-G solvation = -35652.125758 eV Core-core repulsion = 30804.819084 eV Total energy + Delta-G solvation = -4847.306675 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.156 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.08324 -41.68119 -40.53097 -39.62745 -38.53643 -37.87823 -37.49321 -37.18321 -34.96093 -33.83920 -32.95414 -32.02842 -31.89056 -31.14676 -29.77257 -27.42800 -25.87050 -25.00139 -24.07190 -23.93670 -23.67918 -22.73197 -21.51171 -21.25101 -20.31093 -19.52329 -19.41024 -18.71435 -18.24038 -18.10793 -17.56190 -16.95469 -16.72380 -16.56587 -16.40863 -16.36224 -16.08782 -15.78891 -15.66058 -15.35779 -15.23014 -15.07839 -14.89626 -14.67006 -14.46674 -14.38770 -14.24337 -14.16598 -13.89321 -13.87367 -13.80885 -13.40066 -13.32280 -13.19755 -13.08737 -12.97012 -12.74299 -12.34457 -12.29913 -12.22722 -12.16676 -11.69872 -11.61732 -11.35064 -11.07673 -10.89790 -10.80792 -10.55926 -10.20990 -10.06256 -9.82405 -9.69656 -5.15914 -0.53304 -0.43906 0.03583 0.06623 1.13993 1.51966 1.61966 1.74889 1.76828 1.87279 1.95895 2.04416 2.56056 2.72519 2.74200 3.06494 3.12856 3.33672 3.37619 3.47582 3.50704 3.57378 3.64027 3.68384 3.71951 3.86132 3.91052 3.94304 4.01950 4.04839 4.16085 4.17209 4.22814 4.27729 4.29267 4.31345 4.52568 4.53324 4.63573 4.66000 4.66672 4.81240 4.83359 4.86701 4.92019 4.96567 5.05104 5.05942 5.11898 5.15853 5.17347 5.25545 5.43051 5.49524 6.02631 6.42149 6.42432 6.47193 6.62353 6.68730 7.20468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.404 5.404 2 C 0.260 3.740 3 C -0.103 4.103 4 C 0.010 3.990 5 C -0.212 4.212 6 C 0.173 3.827 7 N -0.537 5.537 8 C 0.372 3.628 9 O -0.293 6.293 10 C 0.089 3.911 11 H 0.097 0.903 12 C -0.132 4.132 13 C -0.124 4.124 14 C 0.143 3.857 15 H 0.093 0.907 16 N -0.725 5.725 17 C 0.560 3.440 18 O -0.516 6.516 19 C -0.165 4.165 20 C 0.173 3.827 21 O -0.476 6.476 22 C -0.129 4.129 23 C -0.076 4.076 24 C -0.074 4.074 25 O -0.536 6.536 26 Si 0.691 3.309 27 C -0.135 4.135 28 C -0.065 4.065 29 C -0.121 4.121 30 C -0.115 4.115 31 H 0.153 0.847 32 H 0.151 0.849 33 H 0.170 0.830 34 H 0.074 0.926 35 H 0.074 0.926 36 H 0.076 0.924 37 H 0.069 0.931 38 H 0.399 0.601 39 H 0.398 0.602 40 H 0.140 0.860 41 H 0.118 0.882 42 H 0.380 0.620 43 H -0.256 1.256 44 H -0.253 1.253 45 H 0.136 0.864 46 H 0.134 0.866 47 H 0.081 0.919 48 H 0.074 0.926 49 H 0.079 0.921 50 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.534 -3.049 -6.076 8.765 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.080 5.080 2 C -0.056 4.056 3 C -0.109 4.109 4 C -0.018 4.018 5 C -0.232 4.232 6 C 0.016 3.984 7 N -0.260 5.260 8 C 0.190 3.810 9 O -0.198 6.198 10 C 0.033 3.967 11 H 0.115 0.885 12 C -0.170 4.170 13 C -0.162 4.162 14 C 0.039 3.961 15 H 0.111 0.889 16 N -0.378 5.378 17 C 0.347 3.653 18 O -0.391 6.391 19 C -0.168 4.168 20 C 0.127 3.873 21 O -0.288 6.288 22 C -0.148 4.148 23 C -0.077 4.077 24 C -0.185 4.185 25 O -0.342 6.342 26 Si 0.592 3.408 27 C -0.152 4.152 28 C -0.084 4.084 29 C -0.159 4.159 30 C -0.153 4.153 31 H 0.170 0.830 32 H 0.169 0.831 33 H 0.187 0.813 34 H 0.093 0.907 35 H 0.092 0.908 36 H 0.094 0.906 37 H 0.088 0.912 38 H 0.234 0.766 39 H 0.257 0.743 40 H 0.158 0.842 41 H 0.135 0.865 42 H 0.228 0.772 43 H -0.180 1.180 44 H -0.177 1.177 45 H 0.153 0.847 46 H 0.152 0.848 47 H 0.100 0.900 48 H 0.093 0.907 49 H 0.097 0.903 50 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 4.998 -2.933 -4.794 7.521 hybrid contribution 0.078 0.652 -0.176 0.680 sum 5.076 -2.281 -4.969 7.461 Atomic orbital electron populations 1.81286 1.11673 1.07011 1.08004 1.25065 0.91984 0.94334 0.94193 1.15923 0.85869 0.98849 1.10267 1.21592 0.94135 0.94696 0.91392 1.22002 0.94467 1.01911 1.04856 1.22791 1.00547 0.87043 0.88011 1.67447 1.05848 1.29238 1.23455 1.19732 0.87470 0.86388 0.87427 1.86312 1.35463 1.31670 1.66367 1.22580 0.95436 0.85233 0.93474 0.88503 1.21910 1.01348 0.99376 0.94375 1.21846 0.98770 0.93641 1.01981 1.21062 0.95305 0.86619 0.93101 0.88879 1.45956 1.47713 1.36881 1.07218 1.18043 0.81852 0.83431 0.81999 1.90846 1.39985 1.45820 1.62499 1.20431 1.02629 0.99913 0.93852 1.18516 0.92615 0.88603 0.87607 1.84764 1.27170 1.47299 1.69539 1.21354 0.97977 0.94077 1.01366 1.20445 0.96786 0.96905 0.93580 1.25194 0.97594 0.90192 1.05515 1.86543 1.55210 1.53923 1.38498 0.94780 0.81639 0.82243 0.82149 1.20925 1.00885 0.99521 0.93887 1.21148 0.94045 0.93529 0.99647 1.21746 1.01087 0.98901 0.94162 1.21564 0.99496 0.91807 1.02413 0.82960 0.83136 0.81293 0.90726 0.90773 0.90573 0.91193 0.76600 0.74299 0.84228 0.86486 0.77246 1.18025 1.17743 0.84667 0.84785 0.90025 0.90713 0.90270 0.90192 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -2.30 18.54 41.84 0.78 -1.53 16 2 C 0.26 0.80 14.91 -22.47 -0.34 0.47 16 3 C -0.10 -0.05 5.77 -106.53 -0.61 -0.66 16 4 C 0.01 -0.02 9.90 -38.88 -0.39 -0.41 16 5 C -0.21 0.81 10.09 -39.50 -0.40 0.42 16 6 C 0.17 -0.51 11.16 -17.49 -0.20 -0.70 16 7 N -0.54 0.17 8.64 -12.97 -0.11 0.06 16 8 C 0.37 0.36 7.47 -16.61 -0.12 0.23 16 9 O -0.29 -0.50 9.20 -18.12 -0.17 -0.67 16 10 C 0.09 -0.03 2.38 -26.73 -0.06 -0.10 16 11 H 0.10 -0.07 6.98 -51.93 -0.36 -0.43 16 12 C -0.13 0.00 5.54 -26.74 -0.15 -0.15 16 13 C -0.12 0.05 5.49 -26.73 -0.15 -0.10 16 14 C 0.14 -0.15 2.45 -67.93 -0.17 -0.31 16 15 H 0.09 0.10 7.58 -51.93 -0.39 -0.29 16 16 N -0.73 0.98 5.03 -54.85 -0.28 0.70 16 17 C 0.56 1.04 7.73 -12.47 -0.10 0.94 16 18 O -0.52 -2.91 14.82 -16.60 -0.25 -3.15 16 19 C -0.16 -0.10 5.89 -104.85 -0.62 -0.71 16 20 C 0.17 0.27 6.72 -38.70 -0.26 0.01 16 21 O -0.48 -1.26 11.58 -40.55 -0.47 -1.73 16 22 C -0.13 -0.05 9.60 -39.48 -0.38 -0.43 16 23 C -0.08 0.08 5.35 -104.57 -0.56 -0.48 16 24 C -0.07 0.11 2.79 36.01 0.10 0.21 16 25 O -0.54 0.51 12.83 -35.23 -0.45 0.06 16 26 Si 0.69 -1.72 29.78 -169.99 -5.06 -6.78 16 27 C -0.13 0.33 8.64 -39.63 -0.34 -0.01 16 28 C -0.06 0.15 9.53 -39.20 -0.37 -0.23 16 29 C -0.12 0.37 5.39 -26.73 -0.14 0.23 16 30 C -0.11 0.18 5.57 -26.73 -0.15 0.04 16 31 H 0.15 -0.70 8.06 -52.49 -0.42 -1.12 16 32 H 0.15 -0.96 8.06 -52.49 -0.42 -1.38 16 33 H 0.17 -0.97 8.06 -52.49 -0.42 -1.40 16 34 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 36 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 37 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 38 H 0.40 -1.68 6.63 -40.82 -0.27 -1.95 16 39 H 0.40 -0.42 9.06 45.56 0.41 0.00 16 40 H 0.14 0.03 8.06 -52.49 -0.42 -0.39 16 41 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 42 H 0.38 -1.90 8.70 45.56 0.40 -1.51 16 43 H -0.26 0.05 7.11 56.52 0.40 0.46 16 44 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 45 H 0.14 -0.65 4.88 -52.49 -0.26 -0.91 16 46 H 0.13 -0.73 6.40 -52.48 -0.34 -1.06 16 47 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 48 H 0.07 -0.31 8.14 -51.93 -0.42 -0.74 16 49 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 50 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 LS Contribution 422.59 15.07 6.37 6.37 Total: 0.00 -12.27 422.59 -10.53 -22.80 By element: Atomic # 1 Polarization: -8.89 SS G_CDS: -5.49 Total: -14.39 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: -5.40 Total: -1.74 kcal Atomic # 7 Polarization: -1.15 SS G_CDS: 0.39 Total: -0.76 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -1.33 Total: -5.50 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.06 Total: -6.78 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -12.27 -10.53 -22.80 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16903866_13422076.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.403 kcal (2) G-P(sol) polarization free energy of solvation -12.268 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.671 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.802 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds