Wall clock time and date at job start Sun Mar 7 2021 07:15:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37868 * 126.46082 * 2 1 4 4 C 1.46686 * 126.23224 * 0.02562 * 3 2 1 5 5 O 1.21699 * 119.99772 * 0.02562 * 4 3 2 6 6 N 1.34767 * 119.99957 * 179.97438 * 4 3 2 7 7 C 1.46506 * 120.00003 * 179.97438 * 6 4 3 8 8 H 1.09004 * 109.47073 * 325.00393 * 7 6 4 9 9 C 1.53002 * 109.47035 * 85.00075 * 7 6 4 10 10 C 1.52996 * 109.46969 * 180.02562 * 9 7 6 11 11 C 1.52997 * 109.47131 * 299.99938 * 10 9 7 12 12 H 1.09004 * 109.47261 * 300.00306 * 11 10 9 13 13 O 1.42905 * 109.47264 * 180.02562 * 11 10 9 14 14 C 1.35476 * 116.99660 * 89.99966 * 13 11 10 15 15 N 1.32162 * 119.80608 * 359.72903 * 14 13 11 16 16 C 1.31939 * 121.80947 * 179.75562 * 15 14 13 17 17 C 1.38278 * 121.19229 * 0.52191 * 16 15 14 18 18 C 1.38423 * 119.45734 * 359.74943 * 17 16 15 19 19 C 1.39948 * 118.34133 * 359.97438 * 18 17 16 20 20 C 1.43193 * 120.59802 * 180.02562 * 19 18 17 21 21 N 9.75237 * 137.43981 * 180.34733 * 4 1 2 22 22 C 1.53002 * 109.47143 * 60.00169 * 11 10 9 23 23 C 1.52996 * 109.46969 * 299.99930 * 22 11 10 24 24 N 1.37648 * 107.53801 * 180.26517 * 3 2 1 25 25 C 1.35536 * 108.63912 * 359.62650 * 24 3 2 26 26 C 1.50703 * 125.56299 * 180.11144 * 25 24 3 27 27 O 1.42901 * 109.47199 * 300.28722 * 26 25 24 28 28 Si 1.86296 * 109.47173 * 180.28475 * 26 25 24 29 29 C 1.35453 * 108.87491 * 0.37572 * 25 24 3 30 30 H 1.09000 * 109.47205 * 89.99881 * 1 2 3 31 31 H 1.09005 * 109.47243 * 209.99908 * 1 2 3 32 32 H 1.09000 * 109.46783 * 329.99394 * 1 2 3 33 33 H 0.96996 * 120.00319 * 0.02562 * 6 4 3 34 34 H 1.09004 * 109.47059 * 300.00628 * 9 7 6 35 35 H 1.09004 * 109.46930 * 60.00230 * 9 7 6 36 36 H 1.09001 * 109.46997 * 180.02562 * 10 9 7 37 37 H 1.08992 * 109.47534 * 60.00418 * 10 9 7 38 38 H 1.07998 * 119.40912 * 180.29170 * 16 15 14 39 39 H 1.07998 * 120.27569 * 179.72518 * 17 16 15 40 40 H 1.07993 * 120.82657 * 180.02562 * 18 17 16 41 41 H 1.09004 * 109.46930 * 59.99935 * 22 11 10 42 42 H 1.09004 * 109.47059 * 179.97438 * 22 11 10 43 43 H 1.09001 * 109.46997 * 179.97438 * 23 22 11 44 44 H 1.08996 * 109.47452 * 300.00062 * 23 22 11 45 45 H 0.96997 * 125.68338 * 179.74183 * 24 3 2 46 46 H 1.09008 * 109.46882 * 60.28314 * 26 25 24 47 47 H 0.96697 * 113.99511 * 299.99765 * 27 26 25 48 48 H 1.48507 * 109.99827 * 180.02562 * 28 26 25 49 49 H 1.48501 * 110.00090 * 301.31841 * 28 26 25 50 50 H 1.07996 * 126.06520 * 179.74456 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1088 0.0000 4 6 1.8899 2.5093 0.0005 5 8 0.7027 2.7766 0.0015 6 7 2.8037 3.4998 0.0010 7 6 2.3679 4.8985 0.0009 8 1 1.4563 4.9950 -0.5888 9 6 2.0956 5.3479 1.4379 10 6 1.6399 6.8084 1.4378 11 6 2.7361 7.6847 0.8285 12 1 3.6478 7.5886 1.4181 13 8 2.3107 9.0489 0.8289 14 6 2.6146 9.7876 1.9232 15 7 3.2715 9.2341 2.9276 16 6 3.5919 9.9176 4.0097 17 6 3.2429 11.2487 4.1455 18 6 2.5493 11.8780 3.1262 19 6 2.2252 11.1346 1.9856 20 6 1.5091 11.7374 0.9019 21 7 0.9427 12.2154 0.0426 22 6 3.0084 7.2353 -0.6085 23 6 3.4641 5.7748 -0.6084 24 7 3.6284 0.6624 -0.0061 25 6 3.6217 -0.6929 -0.0014 26 6 4.8433 -1.5754 -0.0031 27 8 5.6228 -1.3076 -1.1705 28 14 4.3181 -3.3628 -0.0037 29 6 2.3379 -1.1248 -0.0008 30 1 -0.3633 0.0000 -1.0277 31 1 -0.3634 -0.8900 0.5138 32 1 -0.3633 0.8899 0.5139 33 1 3.7500 3.2867 0.0006 34 1 1.3144 4.7238 1.8719 35 1 3.0072 5.2514 2.0277 36 1 1.4463 7.1287 2.4616 37 1 0.7282 6.9045 0.8483 38 1 4.1334 9.4277 4.8054 39 1 3.5090 11.7929 5.0396 40 1 2.2659 12.9168 3.2088 41 1 2.0966 7.3314 -1.1981 42 1 3.7891 7.8599 -1.0427 43 1 3.6577 5.4545 -1.6321 44 1 4.3758 5.6787 -0.0187 45 1 4.4191 1.2242 -0.0110 46 1 5.4396 -1.3721 0.8864 47 1 5.1544 -1.4671 -2.0012 48 1 5.5138 -4.2435 -0.0048 49 1 3.4802 -3.6464 1.1891 50 1 2.0136 -2.1549 -0.0014 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16903866_13940406.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:15:39 Heat of formation + Delta-G solvation = 3.026309 kcal Electronic energy + Delta-G solvation = -34216.013502 eV Core-core repulsion = 29596.786437 eV Total energy + Delta-G solvation = -4619.227065 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.168 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.60432 -42.07169 -40.79952 -39.70791 -38.11457 -37.76279 -37.52810 -35.12815 -33.85446 -33.45574 -32.20065 -32.01197 -31.66009 -29.79903 -28.13172 -26.81793 -25.87251 -24.92789 -24.02538 -23.37434 -22.16007 -21.59993 -21.41695 -20.48194 -20.17791 -19.51751 -19.45715 -18.25458 -18.04153 -17.38052 -16.98708 -16.75012 -16.45206 -16.40028 -16.16157 -15.78973 -15.43010 -15.32362 -15.17451 -15.04563 -14.88834 -14.49944 -14.48057 -14.32260 -14.27023 -14.18640 -13.93569 -13.90182 -13.82665 -13.58793 -13.47274 -13.42915 -13.22991 -13.08314 -12.91834 -12.76704 -12.33051 -12.23554 -12.16033 -12.02856 -11.64783 -11.38326 -11.09307 -10.99292 -10.88810 -10.74554 -10.20806 -9.82306 -9.71233 -9.16044 -5.07755 -0.54527 0.02221 0.36468 1.09686 1.51585 1.60390 1.62657 1.75784 1.82748 1.95142 2.01274 2.14611 2.36609 2.71918 2.72753 3.11437 3.25249 3.42477 3.47961 3.49782 3.62116 3.67301 3.78888 3.82687 3.90936 3.98231 4.01936 4.14231 4.14902 4.18137 4.20078 4.25418 4.28226 4.35091 4.49542 4.60769 4.65260 4.74044 4.78657 4.81520 4.83124 4.85889 4.93935 5.02185 5.02861 5.07169 5.12040 5.21214 5.22333 5.33416 5.45720 5.64844 5.90324 6.00885 6.22872 6.34160 6.43011 6.45971 6.61147 7.14150 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.063 4.063 3 C -0.057 4.057 4 C 0.592 3.408 5 O -0.520 6.520 6 N -0.730 5.730 7 C 0.144 3.856 8 H 0.095 0.905 9 C -0.123 4.123 10 C -0.132 4.132 11 C 0.089 3.911 12 H 0.096 0.904 13 O -0.292 6.292 14 C 0.372 3.628 15 N -0.537 5.537 16 C 0.173 3.827 17 C -0.212 4.212 18 C 0.010 3.990 19 C -0.102 4.102 20 C 0.260 3.740 21 N -0.404 5.404 22 C -0.115 4.115 23 C -0.121 4.121 24 N -0.524 5.524 25 C 0.026 3.974 26 C -0.055 4.055 27 O -0.544 6.544 28 Si 0.721 3.279 29 C -0.201 4.201 30 H 0.070 0.930 31 H 0.064 0.936 32 H 0.081 0.919 33 H 0.393 0.607 34 H 0.076 0.924 35 H 0.068 0.932 36 H 0.075 0.925 37 H 0.074 0.926 38 H 0.170 0.830 39 H 0.151 0.849 40 H 0.153 0.847 41 H 0.079 0.921 42 H 0.080 0.920 43 H 0.081 0.919 44 H 0.073 0.927 45 H 0.416 0.584 46 H 0.115 0.885 47 H 0.383 0.617 48 H -0.253 1.253 49 H -0.253 1.253 50 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.287 -1.986 3.098 6.442 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.072 4.072 3 C -0.170 4.170 4 C 0.380 3.620 5 O -0.395 6.395 6 N -0.381 5.381 7 C 0.040 3.960 8 H 0.113 0.887 9 C -0.162 4.162 10 C -0.170 4.170 11 C 0.033 3.967 12 H 0.114 0.886 13 O -0.198 6.198 14 C 0.190 3.810 15 N -0.260 5.260 16 C 0.016 3.984 17 C -0.232 4.232 18 C -0.018 4.018 19 C -0.109 4.109 20 C -0.056 4.056 21 N -0.079 5.079 22 C -0.153 4.153 23 C -0.159 4.159 24 N -0.121 5.121 25 C -0.092 4.092 26 C -0.165 4.165 27 O -0.349 6.349 28 Si 0.620 3.380 29 C -0.226 4.226 30 H 0.089 0.911 31 H 0.083 0.917 32 H 0.099 0.901 33 H 0.227 0.773 34 H 0.095 0.905 35 H 0.087 0.913 36 H 0.093 0.907 37 H 0.093 0.907 38 H 0.187 0.813 39 H 0.169 0.831 40 H 0.171 0.829 41 H 0.098 0.902 42 H 0.098 0.902 43 H 0.099 0.901 44 H 0.092 0.908 45 H 0.254 0.746 46 H 0.133 0.867 47 H 0.231 0.769 48 H -0.178 1.178 49 H -0.177 1.177 50 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 4.208 -2.355 2.288 5.337 hybrid contribution 1.235 1.342 0.924 2.045 sum 5.443 -1.013 3.213 6.401 Atomic orbital electron populations 1.20397 0.88847 1.03215 1.02603 1.19940 0.96043 0.90344 1.00840 1.20234 0.83543 0.93515 1.19692 1.17026 0.85879 0.82941 0.76184 1.90848 1.15852 1.83105 1.49705 1.45940 1.09250 1.06250 1.76637 1.21082 0.98770 0.79127 0.97045 0.88654 1.21846 1.02451 0.95420 0.96473 1.21908 0.98705 0.94192 1.02185 1.22572 0.98987 0.77113 0.98036 0.88568 1.86312 1.73470 1.25005 1.35002 1.19730 0.88104 0.87093 0.86112 1.67445 1.17094 1.39117 1.02362 1.22788 0.91675 0.91076 0.92878 1.22006 1.03393 0.96579 1.01234 1.21597 0.90825 1.00039 0.89344 1.15925 1.08711 0.91909 0.94349 1.25012 0.93620 0.93921 0.93022 1.81237 1.09304 1.07986 1.09388 1.21559 1.03322 0.95423 0.94962 1.21747 0.98202 0.93733 1.02249 1.41839 1.07126 1.06558 1.56529 1.21094 0.96832 0.83332 1.07973 1.24963 0.91244 1.09024 0.91284 1.86495 1.41527 1.91279 1.15627 0.93988 0.82262 0.72895 0.88840 1.20610 0.90803 0.99102 1.12036 0.91109 0.91662 0.90061 0.77314 0.90497 0.91299 0.90676 0.90683 0.81308 0.83124 0.82942 0.90193 0.90184 0.90065 0.90834 0.74633 0.86744 0.76862 1.17803 1.17683 0.83238 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.15 9.83 36.00 0.35 0.20 16 2 C -0.06 -0.12 6.21 -104.16 -0.65 -0.77 16 3 C -0.06 -0.08 7.06 -81.98 -0.58 -0.66 16 4 C 0.59 1.25 7.75 -12.85 -0.10 1.15 16 5 O -0.52 -2.81 14.46 5.19 0.08 -2.73 16 6 N -0.73 0.77 5.07 -55.11 -0.28 0.49 16 7 C 0.14 -0.13 2.45 -67.93 -0.17 -0.29 16 8 H 0.10 0.11 7.58 -51.93 -0.39 -0.29 16 9 C -0.12 0.07 5.49 -26.73 -0.15 -0.08 16 10 C -0.13 0.01 5.54 -26.73 -0.15 -0.14 16 11 C 0.09 -0.03 2.38 -26.73 -0.06 -0.09 16 12 H 0.10 -0.05 6.99 -51.93 -0.36 -0.41 16 13 O -0.29 -0.52 9.20 -18.12 -0.17 -0.69 16 14 C 0.37 0.37 7.47 -16.61 -0.12 0.25 16 15 N -0.54 0.14 8.64 -12.97 -0.11 0.03 16 16 C 0.17 -0.50 11.16 -17.49 -0.20 -0.69 16 17 C -0.21 0.81 10.09 -39.50 -0.40 0.41 16 18 C 0.01 -0.02 9.90 -38.87 -0.38 -0.41 16 19 C -0.10 -0.05 5.77 -106.54 -0.61 -0.66 16 20 C 0.26 0.81 14.91 -22.51 -0.34 0.47 16 21 N -0.40 -2.31 18.53 41.79 0.77 -1.53 16 22 C -0.11 0.16 5.57 -26.73 -0.15 0.01 16 23 C -0.12 0.33 5.39 -26.73 -0.14 0.18 16 24 N -0.52 0.52 5.99 -5.69 -0.03 0.48 16 25 C 0.03 -0.02 6.47 -81.95 -0.53 -0.55 16 26 C -0.05 0.10 3.08 36.01 0.11 0.21 16 27 O -0.54 0.90 12.88 -35.23 -0.45 0.45 16 28 Si 0.72 -1.67 30.54 -169.99 -5.19 -6.86 16 29 C -0.20 -0.03 9.27 -39.98 -0.37 -0.40 16 30 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 31 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 32 H 0.08 0.27 6.48 -51.93 -0.34 -0.06 16 33 H 0.39 -1.42 7.73 -40.82 -0.32 -1.74 16 34 H 0.08 0.11 8.14 -51.93 -0.42 -0.32 16 35 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 36 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 38 H 0.17 -0.96 8.06 -52.49 -0.42 -1.39 16 39 H 0.15 -0.96 8.06 -52.49 -0.42 -1.38 16 40 H 0.15 -0.70 8.06 -52.49 -0.42 -1.12 16 41 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 44 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 45 H 0.42 -1.39 8.19 -40.82 -0.33 -1.72 16 46 H 0.12 -0.20 7.96 -51.92 -0.41 -0.61 16 47 H 0.38 -1.93 8.70 45.56 0.40 -1.53 16 48 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 49 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 50 H 0.15 -0.26 6.17 -52.49 -0.32 -0.58 16 LS Contribution 420.73 15.07 6.34 6.34 Total: 0.00 -10.40 420.73 -10.46 -20.86 By element: Atomic # 1 Polarization: -8.20 SS G_CDS: -6.78 Total: -14.98 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: -4.63 Total: -1.86 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: 0.35 Total: -0.53 kcal Atomic # 8 Polarization: -2.42 SS G_CDS: -0.55 Total: -2.97 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.19 Total: -6.86 kcal Total LS contribution 6.34 Total: 6.34 kcal Total: -10.40 -10.46 -20.86 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16903866_13940406.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.883 kcal (2) G-P(sol) polarization free energy of solvation -10.399 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.484 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.458 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.856 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds