Wall clock time and date at job start Sun Mar 7 2021 07:15:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.43199 * 179.97438 * 2 1 4 4 C 1.39946 * 120.60166 * 71.13921 * 3 2 1 5 5 C 1.38411 * 118.34464 * 180.02562 * 4 3 2 6 6 C 1.38281 * 119.45869 * 0.02562 * 5 4 3 7 7 N 1.31933 * 121.19386 * 359.97438 * 6 5 4 8 8 C 1.32174 * 121.80445 * 359.97438 * 7 6 5 9 9 O 1.35481 * 119.79605 * 179.72265 * 8 7 6 10 10 C 1.42898 * 117.00388 * 0.02562 * 9 8 7 11 11 H 1.08997 * 109.46551 * 329.99277 * 10 9 8 12 12 C 1.52998 * 109.47162 * 89.99758 * 10 9 8 13 13 C 1.53005 * 109.46818 * 180.02562 * 12 10 9 14 14 C 1.52992 * 109.47120 * 299.99656 * 13 12 10 15 15 H 1.09001 * 109.47690 * 300.00238 * 14 13 12 16 16 N 1.46501 * 109.47416 * 179.97438 * 14 13 12 17 17 C 1.34782 * 119.99624 * 84.99889 * 16 14 13 18 18 O 1.21278 * 120.00092 * 0.02562 * 17 16 14 19 19 C 1.50706 * 119.99655 * 180.02562 * 17 16 14 20 20 C 1.50698 * 109.46770 * 179.97438 * 19 17 16 21 21 C 1.34841 * 125.89264 * 274.68876 * 20 19 17 22 22 C 1.40898 * 107.42003 * 179.88939 * 21 20 19 23 23 C 1.34847 * 107.41270 * 0.37618 * 22 21 20 24 24 C 1.50699 * 125.89147 * 179.80829 * 23 22 21 25 25 O 1.42901 * 109.47448 * 119.95730 * 24 23 22 26 26 Si 1.86303 * 109.46818 * 359.95631 * 24 23 22 27 27 N 1.36346 * 108.22299 * 359.77285 * 23 22 21 28 28 C 1.53000 * 109.47164 * 60.00107 * 14 13 12 29 29 C 1.52991 * 109.47389 * 300.00068 * 28 14 13 30 30 H 1.08002 * 120.82534 * 0.02562 * 4 3 2 31 31 H 1.07998 * 120.27229 * 180.02562 * 5 4 3 32 32 H 1.08005 * 119.40146 * 180.02562 * 6 5 4 33 33 H 1.09002 * 109.46843 * 299.99623 * 12 10 9 34 34 H 1.08997 * 109.47780 * 60.00271 * 12 10 9 35 35 H 1.09002 * 109.46585 * 179.97438 * 13 12 10 36 36 H 1.09001 * 109.47034 * 60.00296 * 13 12 10 37 37 H 0.96998 * 120.00368 * 265.00346 * 16 14 13 38 38 H 1.09004 * 109.47091 * 299.99996 * 19 17 16 39 39 H 1.09000 * 109.47381 * 59.99772 * 19 17 16 40 40 H 1.08001 * 126.29474 * 0.02562 * 21 20 19 41 41 H 1.08000 * 126.29381 * 180.16785 * 22 21 20 42 42 H 1.09008 * 109.47193 * 239.96056 * 24 23 22 43 43 H 0.96700 * 113.99707 * 180.02562 * 25 24 23 44 44 H 1.48502 * 109.99993 * 298.68116 * 26 24 23 45 45 H 1.48500 * 109.99906 * 60.00311 * 26 24 23 46 46 H 0.96998 * 125.63446 * 180.02562 * 27 23 22 47 47 H 1.09002 * 109.47438 * 179.97438 * 28 14 13 48 48 H 1.09004 * 109.47028 * 60.00223 * 28 14 13 49 49 H 1.09004 * 109.47163 * 300.00073 * 29 28 14 50 50 H 1.08997 * 109.47822 * 179.97438 * 29 28 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2806 -0.3884 -1.1399 5 6 4.6636 -0.3707 -1.0881 6 6 5.2955 0.0261 0.0761 7 7 4.6040 0.3891 1.1394 8 6 3.2822 0.3914 1.1433 9 8 2.6129 0.7665 2.2599 10 6 3.3994 1.1459 3.3911 11 1 4.3421 0.5990 3.3779 12 6 3.6806 2.6488 3.3357 13 6 4.5232 3.0548 4.5466 14 6 3.7612 2.7257 5.8317 15 1 2.8183 3.2725 5.8453 16 7 4.5682 3.1139 6.9911 17 6 4.5284 4.3821 7.4456 18 8 3.8242 5.2018 6.8950 19 6 5.3589 4.7816 8.6380 20 6 5.1357 6.2412 8.9392 21 6 5.7855 7.2749 8.3669 22 6 5.2723 8.4598 8.9307 23 6 4.3344 8.1046 9.8321 24 6 3.5232 9.0486 10.6816 25 8 2.1339 8.8697 10.3988 26 14 4.0135 10.8049 10.2997 27 7 4.2461 6.7440 9.8419 28 6 3.4798 1.2228 5.8870 29 6 2.6373 0.8167 4.6763 30 1 2.7641 -0.6949 -2.0376 31 1 5.2445 -0.6644 -1.9499 32 1 6.3748 0.0400 0.1153 33 1 4.2240 2.8832 2.4203 34 1 2.7379 3.1957 3.3489 35 1 4.7240 4.1255 4.5068 36 1 5.4661 2.5080 4.5329 37 1 5.1311 2.4582 7.4317 38 1 5.0670 4.1833 9.5011 39 1 6.4134 4.6132 8.4191 40 1 6.5559 7.2072 7.6131 41 1 5.5768 9.4672 8.6881 42 1 3.7092 8.8404 11.7353 43 1 1.5508 9.4469 10.9107 44 1 5.4487 11.0125 10.6198 45 1 3.7647 11.1014 8.8661 46 1 3.6488 6.2205 10.3987 47 1 2.9373 0.9881 6.8028 48 1 4.4226 0.6759 5.8735 49 1 1.6945 1.3635 4.6898 50 1 2.4372 -0.2541 4.7154 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16903866_14644196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:15:43 Heat of formation + Delta-G solvation = 8.346817 kcal Electronic energy + Delta-G solvation = -33799.447270 eV Core-core repulsion = 29180.450919 eV Total energy + Delta-G solvation = -4618.996351 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.168 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.27395 -42.05247 -40.91908 -39.78297 -38.07246 -37.61587 -37.49074 -34.89991 -33.83569 -33.22803 -32.04126 -31.93213 -31.85447 -30.20664 -28.89165 -25.87741 -25.30616 -24.69154 -23.96994 -23.09745 -21.67328 -21.38241 -21.25708 -20.84697 -20.27030 -19.47751 -18.44399 -18.37789 -18.09775 -17.93057 -17.21562 -16.92066 -16.42802 -16.31336 -16.03838 -15.69907 -15.35003 -15.17731 -15.03894 -15.03001 -14.76765 -14.71797 -14.39277 -14.36326 -14.23310 -14.15750 -13.98127 -13.88209 -13.80846 -13.51500 -13.38941 -13.26306 -13.18592 -13.00137 -12.91414 -12.67091 -12.43409 -12.29040 -12.17837 -11.87375 -11.60879 -11.34289 -11.07327 -10.90099 -10.80543 -10.42217 -10.08309 -9.70641 -9.69288 -8.86616 -4.94889 -0.52897 0.03932 1.11124 1.32339 1.62666 1.66375 1.74234 1.77872 1.93714 1.96305 2.11192 2.28501 2.49605 2.73194 2.74362 3.13311 3.43451 3.47162 3.50957 3.63822 3.64953 3.69902 3.87120 3.90044 3.94242 3.96805 4.00213 4.05922 4.07394 4.16735 4.23447 4.29453 4.30575 4.32251 4.35721 4.54434 4.56793 4.64288 4.67114 4.82199 4.82965 4.84237 4.87759 4.97430 5.06107 5.11011 5.16322 5.26484 5.30309 5.35858 5.45839 6.03129 6.06703 6.20053 6.44190 6.47579 6.58161 6.62742 6.69517 7.25015 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.404 5.404 2 C 0.260 3.740 3 C -0.103 4.103 4 C 0.010 3.990 5 C -0.212 4.212 6 C 0.173 3.827 7 N -0.537 5.537 8 C 0.372 3.628 9 O -0.293 6.293 10 C 0.089 3.911 11 H 0.097 0.903 12 C -0.132 4.132 13 C -0.123 4.123 14 C 0.142 3.858 15 H 0.091 0.909 16 N -0.730 5.730 17 C 0.511 3.489 18 O -0.519 6.519 19 C -0.071 4.071 20 C 0.037 3.963 21 C -0.171 4.171 22 C -0.195 4.195 23 C 0.036 3.964 24 C -0.053 4.053 25 O -0.550 6.550 26 Si 0.714 3.286 27 N -0.533 5.533 28 C -0.120 4.120 29 C -0.115 4.115 30 H 0.153 0.847 31 H 0.151 0.849 32 H 0.170 0.830 33 H 0.074 0.926 34 H 0.073 0.927 35 H 0.075 0.925 36 H 0.070 0.930 37 H 0.401 0.599 38 H 0.100 0.900 39 H 0.118 0.882 40 H 0.137 0.863 41 H 0.133 0.867 42 H 0.070 0.930 43 H 0.383 0.617 44 H -0.254 1.254 45 H -0.250 1.250 46 H 0.413 0.587 47 H 0.080 0.920 48 H 0.074 0.926 49 H 0.078 0.922 50 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.456 -2.980 3.362 7.865 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.080 5.080 2 C -0.056 4.056 3 C -0.109 4.109 4 C -0.018 4.018 5 C -0.232 4.232 6 C 0.016 3.984 7 N -0.260 5.260 8 C 0.190 3.810 9 O -0.198 6.198 10 C 0.033 3.967 11 H 0.115 0.885 12 C -0.170 4.170 13 C -0.161 4.161 14 C 0.038 3.962 15 H 0.109 0.891 16 N -0.382 5.382 17 C 0.296 3.704 18 O -0.393 6.393 19 C -0.112 4.112 20 C -0.077 4.077 21 C -0.195 4.195 22 C -0.220 4.220 23 C -0.077 4.077 24 C -0.163 4.163 25 O -0.356 6.356 26 Si 0.613 3.387 27 N -0.127 5.127 28 C -0.158 4.158 29 C -0.153 4.153 30 H 0.170 0.830 31 H 0.169 0.831 32 H 0.187 0.813 33 H 0.093 0.907 34 H 0.092 0.908 35 H 0.094 0.906 36 H 0.088 0.912 37 H 0.235 0.765 38 H 0.118 0.882 39 H 0.136 0.864 40 H 0.155 0.845 41 H 0.151 0.849 42 H 0.088 0.912 43 H 0.231 0.769 44 H -0.179 1.179 45 H -0.174 1.174 46 H 0.250 0.750 47 H 0.098 0.902 48 H 0.093 0.907 49 H 0.097 0.903 50 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 4.969 -2.083 3.026 6.179 hybrid contribution 0.371 -1.455 -0.298 1.531 sum 5.340 -3.538 2.728 6.962 Atomic orbital electron populations 1.81284 1.11677 1.08322 1.06683 1.25064 0.91987 0.94157 0.94378 1.15922 0.85872 1.14003 0.95115 1.21592 0.94131 0.90265 0.95821 1.22002 0.94466 1.05874 1.00893 1.22794 1.00548 0.88356 0.86700 1.67451 1.05821 1.21453 1.31265 1.19736 0.87474 0.87877 0.85933 1.86311 1.35477 1.78343 1.19703 1.22571 0.95398 0.96049 0.82648 0.88505 1.21914 1.01331 0.94698 0.99105 1.21835 0.98734 1.02616 0.92959 1.21041 0.95301 0.95110 0.84772 0.89128 1.46044 1.48051 1.11358 1.32790 1.20602 0.82634 0.82003 0.85144 1.90792 1.40040 1.50068 1.58374 1.20133 1.02151 0.91598 0.97282 1.19447 0.97000 0.93837 0.97413 1.20528 1.04372 0.90991 1.03651 1.20506 1.02136 0.98464 1.00889 1.19664 1.01862 0.82743 1.03470 1.24436 0.84184 1.08547 0.99100 1.86519 1.14978 1.65981 1.68154 0.95429 0.82594 0.76958 0.83704 1.41747 1.31747 1.06123 1.33092 1.21737 1.01028 0.94651 0.98415 1.21565 0.99486 1.02832 0.91443 0.82953 0.83123 0.81279 0.90723 0.90833 0.90631 0.91176 0.76527 0.88167 0.86442 0.84502 0.84928 0.91170 0.76892 1.17856 1.17399 0.75009 0.90174 0.90702 0.90334 0.90227 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -2.42 18.54 41.84 0.78 -1.65 16 2 C 0.26 0.88 14.91 -22.47 -0.34 0.55 16 3 C -0.10 -0.08 5.76 -106.54 -0.61 -0.69 16 4 C 0.01 -0.02 9.90 -38.88 -0.39 -0.41 16 5 C -0.21 0.77 10.09 -39.50 -0.40 0.38 16 6 C 0.17 -0.47 11.16 -17.49 -0.20 -0.67 16 7 N -0.54 0.03 8.64 -12.97 -0.11 -0.08 16 8 C 0.37 0.48 7.47 -16.61 -0.12 0.35 16 9 O -0.29 -0.63 9.20 -18.13 -0.17 -0.80 16 10 C 0.09 0.01 2.38 -26.73 -0.06 -0.06 16 11 H 0.10 -0.03 6.98 -51.93 -0.36 -0.39 16 12 C -0.13 -0.06 5.54 -26.73 -0.15 -0.21 16 13 C -0.12 0.02 5.49 -26.73 -0.15 -0.13 16 14 C 0.14 -0.08 2.45 -67.93 -0.17 -0.25 16 15 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 16 N -0.73 1.14 5.08 -53.81 -0.27 0.86 16 17 C 0.51 0.73 7.79 -10.98 -0.09 0.65 16 18 O -0.52 -3.44 15.70 5.56 0.09 -3.35 16 19 C -0.07 0.07 6.24 -29.03 -0.18 -0.11 16 20 C 0.04 0.10 5.66 -81.79 -0.46 -0.36 16 21 C -0.17 -0.73 10.76 -39.78 -0.43 -1.16 16 22 C -0.20 -0.98 9.37 -39.78 -0.37 -1.35 16 23 C 0.04 0.15 6.54 -81.79 -0.53 -0.39 16 24 C -0.05 -0.06 3.07 36.01 0.11 0.06 16 25 O -0.55 -0.78 12.86 -35.23 -0.45 -1.23 16 26 Si 0.71 -0.09 30.58 -169.99 -5.20 -5.29 16 27 N -0.53 -1.56 6.08 -5.44 -0.03 -1.59 16 28 C -0.12 0.30 5.39 -26.74 -0.14 0.16 16 29 C -0.12 0.12 5.57 -26.73 -0.15 -0.03 16 30 H 0.15 -0.67 8.06 -52.49 -0.42 -1.09 16 31 H 0.15 -0.94 8.06 -52.49 -0.42 -1.36 16 32 H 0.17 -0.95 8.06 -52.48 -0.42 -1.37 16 33 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 34 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 35 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.40 -1.87 8.60 -40.82 -0.35 -2.22 16 38 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 39 H 0.12 -0.39 8.14 -51.93 -0.42 -0.82 16 40 H 0.14 0.38 8.06 -52.49 -0.42 -0.04 16 41 H 0.13 0.58 6.22 -52.49 -0.33 0.25 16 42 H 0.07 -0.08 7.96 -51.92 -0.41 -0.49 16 43 H 0.38 -1.52 8.74 45.56 0.40 -1.12 16 44 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 45 H -0.25 -0.93 7.11 56.52 0.40 -0.53 16 46 H 0.41 0.32 8.96 -40.82 -0.37 -0.04 16 47 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 48 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 49 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 50 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 LS Contribution 425.15 15.07 6.41 6.41 Total: 0.00 -13.77 425.15 -10.72 -24.50 By element: Atomic # 1 Polarization: -7.17 SS G_CDS: -6.93 Total: -14.10 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -4.83 Total: -3.68 kcal Atomic # 7 Polarization: -2.82 SS G_CDS: 0.36 Total: -2.46 kcal Atomic # 8 Polarization: -4.85 SS G_CDS: -0.53 Total: -5.38 kcal Atomic # 14 Polarization: -0.09 SS G_CDS: -5.20 Total: -5.29 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -13.77 -10.72 -24.50 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16903866_14644196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.845 kcal (2) G-P(sol) polarization free energy of solvation -13.774 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.071 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.724 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.498 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.347 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds