Wall clock time and date at job start Sun Mar 7 2021 07:16:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.43195 * 179.97438 * 2 1 4 4 C 1.39953 * 120.60062 * 97.62719 * 3 2 1 5 5 C 1.38411 * 118.34679 * 179.97438 * 4 3 2 6 6 C 1.38279 * 119.45805 * 0.02562 * 5 4 3 7 7 N 1.31944 * 121.19258 * 359.97438 * 6 5 4 8 8 C 1.32167 * 121.80569 * 0.02562 * 7 6 5 9 9 O 1.35473 * 119.80167 * 179.97438 * 8 7 6 10 10 C 1.42910 * 116.99786 * 359.97438 * 9 8 7 11 11 H 1.08998 * 109.47014 * 30.00079 * 10 9 8 12 12 C 1.52996 * 109.46955 * 150.00158 * 10 9 8 13 13 C 1.53005 * 109.47045 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.46931 * 299.99806 * 13 12 10 15 15 H 1.09004 * 109.46993 * 300.00189 * 14 13 12 16 16 N 1.46497 * 109.47354 * 179.97438 * 14 13 12 17 17 C 1.34770 * 120.00308 * 154.99720 * 16 14 13 18 18 O 1.21287 * 120.00114 * 0.02562 * 17 16 14 19 19 C 1.50706 * 120.00076 * 180.02562 * 17 16 14 20 20 O 1.42903 * 109.46766 * 180.02562 * 19 17 16 21 21 C 1.35905 * 116.99330 * 180.02562 * 20 19 17 22 22 C 1.38733 * 120.05971 * 359.72174 * 21 20 19 23 23 C 1.38145 * 119.94268 * 179.74725 * 22 21 20 24 24 C 1.38264 * 120.05605 * 0.50812 * 23 22 21 25 25 C 1.50699 * 119.94476 * 179.74724 * 24 23 22 26 26 O 1.42903 * 109.47312 * 245.02359 * 25 24 23 27 27 Si 1.86304 * 109.47115 * 5.02315 * 25 24 23 28 28 C 1.38264 * 120.11424 * 359.76800 * 24 23 22 29 29 C 1.38152 * 120.05550 * 359.97438 * 28 24 23 30 30 C 1.53000 * 109.47301 * 59.99737 * 14 13 12 31 31 C 1.52996 * 109.47292 * 300.00442 * 30 14 13 32 32 H 1.08003 * 120.82405 * 359.97140 * 4 3 2 33 33 H 1.07999 * 120.26984 * 180.02562 * 5 4 3 34 34 H 1.08003 * 119.40342 * 180.25872 * 6 5 4 35 35 H 1.09000 * 109.47126 * 299.99709 * 12 10 9 36 36 H 1.08998 * 109.47324 * 60.00111 * 12 10 9 37 37 H 1.08998 * 109.47057 * 59.99840 * 13 12 10 38 38 H 1.09003 * 109.46868 * 180.02562 * 13 12 10 39 39 H 0.97004 * 119.99956 * 335.00758 * 16 14 13 40 40 H 1.08999 * 109.46983 * 299.99947 * 19 17 16 41 41 H 1.09004 * 109.46709 * 60.00515 * 19 17 16 42 42 H 1.07997 * 120.02653 * 0.02562 * 22 21 20 43 43 H 1.08000 * 119.96693 * 180.28182 * 23 22 21 44 44 H 1.08997 * 109.47306 * 125.02341 * 25 24 23 45 45 H 0.96699 * 114.00156 * 179.97438 * 26 25 24 46 46 H 1.48504 * 109.99926 * 300.00132 * 27 25 24 47 47 H 1.48500 * 109.99960 * 61.32003 * 27 25 24 48 48 H 1.08001 * 119.97877 * 179.97438 * 28 24 23 49 49 H 1.07994 * 120.02760 * 179.97438 * 29 28 24 50 50 H 1.09004 * 109.46727 * 60.00290 * 30 14 13 51 51 H 1.09003 * 109.47303 * 179.97438 * 30 14 13 52 52 H 1.09004 * 109.47110 * 299.99614 * 31 30 14 53 53 H 1.08999 * 109.47157 * 180.02562 * 31 30 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2804 0.1608 -1.1940 5 6 4.6634 0.1548 -1.1399 6 6 5.2956 -0.0082 0.0790 7 7 4.6043 -0.1577 1.1928 8 6 3.2826 -0.1594 1.1974 9 8 2.6135 -0.3165 2.3648 10 6 3.4004 -0.4751 3.5472 11 1 4.3431 0.0595 3.4307 12 6 2.6380 0.0911 4.7468 13 6 3.4806 -0.0781 6.0127 14 6 3.7626 -1.5641 6.2428 15 1 2.8199 -2.0989 6.3596 16 7 4.5699 -1.7261 7.4544 17 6 4.5303 -2.8854 8.1406 18 8 3.8266 -3.7948 7.7548 19 6 5.3604 -3.0518 9.3874 20 8 5.1490 -4.3569 9.9297 21 6 5.8281 -4.6710 11.0642 22 6 6.6848 -3.7442 11.6404 23 6 7.3699 -4.0641 12.7965 24 6 7.2105 -5.3104 13.3736 25 6 7.9635 -5.6587 14.6316 26 8 8.8867 -6.7145 14.3574 27 14 8.8939 -4.1610 15.2334 28 6 6.3617 -6.2379 12.7982 29 6 5.6702 -5.9210 11.6450 30 6 4.5249 -2.1304 5.0432 31 6 3.6823 -1.9611 3.7774 32 1 2.7637 0.2860 -2.1341 33 1 5.2440 0.2763 -2.0424 34 1 6.3749 -0.0086 0.1207 35 1 2.4375 1.1499 4.5831 36 1 1.6952 -0.4434 4.8634 37 1 4.4232 0.4568 5.8958 38 1 2.9372 0.3249 6.8674 39 1 5.1329 -0.9989 7.7630 40 1 6.4149 -2.9275 9.1411 41 1 5.0677 -2.3011 10.1216 42 1 6.8125 -2.7720 11.1879 43 1 8.0334 -3.3413 13.2479 44 1 7.2597 -5.9817 15.3987 45 1 9.4075 -6.9906 15.1240 46 1 9.8568 -3.7108 14.1964 47 1 7.9424 -3.0664 15.5524 48 1 6.2391 -7.2109 13.2506 49 1 5.0076 -6.6459 11.1957 50 1 5.4675 -1.5955 4.9264 51 1 4.7262 -3.1890 5.2073 52 1 2.7397 -2.4960 3.8941 53 1 4.2252 -2.3650 2.9228 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16903866_2989410.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:16:05 Heat of formation + Delta-G solvation = -41.358016 kcal Electronic energy + Delta-G solvation = -36689.560901 eV Core-core repulsion = 31686.926766 eV Total energy + Delta-G solvation = -5002.634136 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.172 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -42.02615 -41.67916 -40.93766 -39.89875 -39.03329 -38.04437 -37.75331 -37.18319 -35.10451 -33.75379 -32.62294 -32.06708 -31.95720 -31.86289 -30.63905 -28.74943 -26.21800 -25.76425 -24.92138 -24.21610 -23.94099 -23.06184 -22.26923 -21.68820 -21.19993 -20.28872 -19.61949 -19.43272 -18.56534 -18.32657 -17.97232 -17.55668 -17.47432 -17.07168 -16.88762 -16.76130 -16.24097 -16.10472 -15.80841 -15.67138 -15.51436 -15.31562 -15.12878 -15.03296 -14.79248 -14.53355 -14.45595 -14.34739 -14.18350 -14.14958 -13.99357 -13.94027 -13.87402 -13.65156 -13.47740 -13.38111 -13.15754 -13.03057 -12.80695 -12.51204 -12.29353 -12.22892 -12.17563 -12.02965 -11.88471 -11.60782 -11.35662 -11.06929 -10.99847 -10.75545 -10.27772 -10.25209 -10.18630 -9.61865 -9.34845 -4.91728 -0.44347 0.11157 0.16558 0.19627 1.32670 1.35899 1.37008 1.48762 1.66306 1.78559 1.86872 1.97150 2.48398 2.50467 2.69195 2.77305 3.24189 3.36937 3.46556 3.51648 3.54202 3.60860 3.73166 3.74529 3.88386 3.90692 3.93745 3.96340 3.97136 4.02033 4.07322 4.13586 4.14793 4.23336 4.26049 4.30566 4.33684 4.40273 4.44414 4.54195 4.58878 4.71248 4.80540 4.80733 4.91881 4.94562 4.99301 5.01405 5.02821 5.07255 5.08322 5.13556 5.16373 5.35017 5.36200 5.42434 5.55463 6.06603 6.14017 6.34283 6.39523 6.68762 6.93166 7.06437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.465 5.465 2 C 0.283 3.717 3 C -0.129 4.129 4 C 0.014 3.986 5 C -0.197 4.197 6 C 0.172 3.828 7 N -0.549 5.549 8 C 0.356 3.644 9 O -0.315 6.315 10 C 0.092 3.908 11 H 0.106 0.894 12 C -0.115 4.115 13 C -0.108 4.108 14 C 0.144 3.856 15 H 0.064 0.936 16 N -0.703 5.703 17 C 0.514 3.486 18 O -0.571 6.571 19 C 0.035 3.965 20 O -0.316 6.316 21 C 0.122 3.878 22 C -0.201 4.201 23 C -0.098 4.098 24 C -0.129 4.129 25 C -0.078 4.078 26 O -0.566 6.566 27 Si 0.773 3.227 28 C -0.056 4.056 29 C -0.161 4.161 30 C -0.115 4.115 31 C -0.126 4.126 32 H 0.173 0.827 33 H 0.186 0.814 34 H 0.202 0.798 35 H 0.087 0.913 36 H 0.062 0.938 37 H 0.100 0.900 38 H 0.092 0.908 39 H 0.423 0.577 40 H 0.124 0.876 41 H 0.125 0.875 42 H 0.162 0.838 43 H 0.127 0.873 44 H 0.091 0.909 45 H 0.403 0.597 46 H -0.293 1.293 47 H -0.287 1.287 48 H 0.146 0.854 49 H 0.136 0.864 50 H 0.090 0.910 51 H 0.051 0.949 52 H 0.053 0.947 53 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.434 6.257 2.285 13.233 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.142 5.142 2 C -0.031 4.031 3 C -0.135 4.135 4 C -0.013 4.013 5 C -0.217 4.217 6 C 0.016 3.984 7 N -0.273 5.273 8 C 0.175 3.825 9 O -0.222 6.222 10 C 0.036 3.964 11 H 0.124 0.876 12 C -0.153 4.153 13 C -0.146 4.146 14 C 0.040 3.960 15 H 0.082 0.918 16 N -0.357 5.357 17 C 0.300 3.700 18 O -0.449 6.449 19 C -0.043 4.043 20 O -0.229 6.229 21 C 0.077 3.923 22 C -0.219 4.219 23 C -0.115 4.115 24 C -0.129 4.129 25 C -0.187 4.187 26 O -0.376 6.376 27 Si 0.679 3.321 28 C -0.074 4.074 29 C -0.179 4.179 30 C -0.154 4.154 31 C -0.165 4.165 32 H 0.191 0.809 33 H 0.203 0.797 34 H 0.219 0.781 35 H 0.105 0.895 36 H 0.081 0.919 37 H 0.119 0.881 38 H 0.111 0.889 39 H 0.261 0.739 40 H 0.142 0.858 41 H 0.143 0.857 42 H 0.179 0.821 43 H 0.144 0.856 44 H 0.109 0.891 45 H 0.254 0.746 46 H -0.221 1.221 47 H -0.214 1.214 48 H 0.164 0.836 49 H 0.154 0.846 50 H 0.109 0.891 51 H 0.069 0.931 52 H 0.072 0.928 53 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 9.104 6.268 2.078 11.247 hybrid contribution -0.554 -0.081 -1.005 1.151 sum 8.550 6.187 1.073 10.608 Atomic orbital electron populations 1.81283 1.13359 1.11069 1.08449 1.25547 0.92539 0.92389 0.92674 1.16148 0.84465 1.18611 0.94316 1.21938 0.94920 0.88395 0.96053 1.22395 0.93830 1.04184 1.01298 1.23471 1.01970 0.86809 0.86130 1.67496 1.05065 1.21021 1.33714 1.19863 0.88184 0.89092 0.85370 1.86292 1.36627 1.84883 1.14382 1.22612 0.95789 0.96613 0.81338 0.87587 1.21581 0.99038 1.02449 0.92209 1.21687 1.02177 0.93342 0.97418 1.21025 0.94059 0.97622 0.83338 0.91779 1.45677 1.47534 1.15751 1.26713 1.20480 0.81970 0.82695 0.84827 1.90775 1.42310 1.41886 1.69899 1.22769 1.01998 0.84937 0.94590 1.86137 1.64467 1.33783 1.38497 1.19163 0.92312 0.94641 0.86231 1.21402 1.00587 1.01284 0.98639 1.20898 0.98786 0.96298 0.95563 1.19676 1.00052 0.94683 0.98536 1.24821 0.96046 1.01523 0.96359 1.86449 1.55255 1.54457 1.41426 0.94300 0.79343 0.74026 0.84434 1.21016 0.93336 0.99485 0.93565 1.20730 1.03859 0.95560 0.97787 1.21755 0.99523 1.01265 0.92859 1.21826 1.00329 0.95833 0.98497 0.80928 0.79710 0.78131 0.89477 0.91871 0.88109 0.88944 0.73879 0.85816 0.85727 0.82078 0.85608 0.89094 0.74639 1.22090 1.21378 0.83610 0.84625 0.89097 0.93052 0.92802 0.91333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.46 -6.57 18.54 19.00 0.35 -6.22 16 2 C 0.28 2.33 14.91 88.33 1.32 3.65 16 3 C -0.13 -0.21 5.77 -21.10 -0.12 -0.33 16 4 C 0.01 -0.09 9.90 22.73 0.23 0.14 16 5 C -0.20 2.04 10.09 22.32 0.23 2.26 16 6 C 0.17 -1.40 11.16 84.69 0.95 -0.45 16 7 N -0.55 0.74 8.64 -307.97 -2.66 -1.92 16 8 C 0.36 0.95 7.47 85.16 0.64 1.58 16 9 O -0.32 -1.65 9.20 -87.72 -0.81 -2.46 16 10 C 0.09 0.01 2.38 30.59 0.07 0.08 16 11 H 0.11 -0.20 6.98 -2.39 -0.02 -0.22 16 12 C -0.11 0.27 5.57 30.59 0.17 0.44 16 13 C -0.11 0.75 5.39 30.59 0.16 0.91 16 14 C 0.14 -0.23 2.45 44.99 0.11 -0.12 16 15 H 0.06 0.32 7.58 -2.38 -0.02 0.31 16 16 N -0.70 3.09 5.08 -442.53 -2.25 0.84 16 17 C 0.51 1.77 7.87 87.66 0.69 2.46 16 18 O -0.57 -8.82 16.16 15.98 0.26 -8.56 16 19 C 0.03 -0.06 5.22 71.24 0.37 0.32 16 20 O -0.32 -2.50 9.67 -73.44 -0.71 -3.21 16 21 C 0.12 0.79 6.69 22.51 0.15 0.94 16 22 C -0.20 -0.50 9.04 22.37 0.20 -0.30 16 23 C -0.10 -0.42 8.66 22.25 0.19 -0.23 16 24 C -0.13 -0.64 5.38 -19.85 -0.11 -0.75 16 25 C -0.08 0.05 2.79 71.24 0.20 0.24 16 26 O -0.57 0.03 12.81 -148.98 -1.91 -1.87 16 27 Si 0.77 -2.28 29.85 68.60 2.05 -0.23 16 28 C -0.06 -0.30 9.68 22.26 0.22 -0.09 16 29 C -0.16 -1.15 9.99 22.37 0.22 -0.93 16 30 C -0.12 0.05 5.49 30.59 0.17 0.22 16 31 C -0.13 -0.22 5.54 30.59 0.17 -0.05 16 32 H 0.17 -1.84 8.06 -2.91 -0.02 -1.87 16 33 H 0.19 -3.14 8.06 -2.91 -0.02 -3.16 16 34 H 0.20 -3.01 8.06 -2.91 -0.02 -3.04 16 35 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 36 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 37 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 38 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 39 H 0.42 -5.36 8.60 -92.71 -0.80 -6.15 16 40 H 0.12 -0.96 7.65 -2.39 -0.02 -0.97 16 41 H 0.13 -0.99 7.67 -2.39 -0.02 -1.01 16 42 H 0.16 -0.79 6.30 -2.91 -0.02 -0.81 16 43 H 0.13 0.31 4.86 -2.91 -0.01 0.29 16 44 H 0.09 -0.40 7.96 -2.39 -0.02 -0.42 16 45 H 0.40 -4.30 8.74 -74.06 -0.65 -4.95 16 46 H -0.29 -1.13 7.05 99.48 0.70 -0.43 16 47 H -0.29 -0.60 7.11 99.48 0.71 0.11 16 48 H 0.15 0.33 8.06 -2.91 -0.02 0.30 16 49 H 0.14 0.86 8.06 -2.91 -0.02 0.84 16 50 H 0.09 -0.39 8.14 -2.38 -0.02 -0.41 16 51 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 52 H 0.05 0.30 8.14 -2.38 -0.02 0.28 16 53 H 0.07 0.20 8.14 -2.39 -0.02 0.18 16 Total: 0.00 -36.85 447.33 0.11 -36.74 By element: Atomic # 1 Polarization: -22.67 SS G_CDS: -0.43 Total: -23.10 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: 6.22 Total: 10.00 kcal Atomic # 7 Polarization: -2.74 SS G_CDS: -4.55 Total: -7.30 kcal Atomic # 8 Polarization: -12.94 SS G_CDS: -3.17 Total: -16.11 kcal Atomic # 14 Polarization: -2.28 SS G_CDS: 2.05 Total: -0.23 kcal Total: -36.85 0.11 -36.74 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16903866_2989410.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.619 kcal (2) G-P(sol) polarization free energy of solvation -36.854 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.473 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.115 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.739 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.358 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds