Wall clock time and date at job start Sun Mar 7 2021 07:17:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37639 * 125.67690 * 2 1 4 4 C 1.46676 * 126.22637 * 359.97213 * 3 2 1 5 5 O 1.21694 * 119.99635 * 4.65158 * 4 3 2 6 6 N 1.34775 * 120.00187 * 184.65248 * 4 3 2 7 7 C 1.46500 * 119.99760 * 174.91540 * 6 4 3 8 8 H 1.08997 * 109.47404 * 35.00524 * 7 6 4 9 9 C 1.53004 * 109.46972 * 155.00394 * 7 6 4 10 10 C 1.53002 * 109.47205 * 180.02562 * 9 7 6 11 11 C 1.53001 * 109.46863 * 299.99835 * 10 9 7 12 12 H 1.08997 * 109.47164 * 299.99748 * 11 10 9 13 13 O 1.42896 * 109.46920 * 180.02562 * 11 10 9 14 14 C 1.35473 * 117.00289 * 89.99747 * 13 11 10 15 15 N 1.32175 * 119.79930 * 359.72638 * 14 13 11 16 16 C 1.31946 * 121.80618 * 179.75206 * 15 14 13 17 17 C 1.38271 * 121.19003 * 0.52466 * 16 15 14 18 18 C 1.38414 * 119.46126 * 359.74376 * 17 16 15 19 19 C 1.39942 * 118.34699 * 0.02562 * 18 17 16 20 20 C 1.43200 * 120.60565 * 180.02562 * 19 18 17 21 21 N 9.69238 * 133.87445 * 167.28321 * 4 1 2 22 22 C 1.53004 * 109.47075 * 60.00086 * 11 10 9 23 23 C 1.52994 * 109.46993 * 299.99700 * 22 11 10 24 24 C 1.37880 * 107.55194 * 179.71741 * 3 2 1 25 25 C 1.39878 * 107.09153 * 0.25438 * 24 3 2 26 26 Br 1.89102 * 126.07501 * 180.02562 * 25 24 3 27 27 C 1.35499 * 107.85223 * 0.02562 * 25 24 3 28 28 C 1.50704 * 125.57131 * 179.97438 * 27 25 24 29 29 O 1.42906 * 109.47247 * 149.96974 * 28 27 25 30 30 Si 1.86301 * 109.47296 * 29.97329 * 28 27 25 31 31 H 1.08998 * 109.47200 * 95.78727 * 1 2 3 32 32 H 1.08997 * 109.47273 * 215.78595 * 1 2 3 33 33 H 1.09004 * 109.47026 * 335.78583 * 1 2 3 34 34 H 0.96994 * 120.00222 * 354.91923 * 6 4 3 35 35 H 1.09009 * 109.46594 * 299.99772 * 9 7 6 36 36 H 1.08997 * 109.46950 * 59.99852 * 9 7 6 37 37 H 1.08997 * 109.47025 * 59.99668 * 10 9 7 38 38 H 1.08997 * 109.47210 * 179.97438 * 10 9 7 39 39 H 1.07998 * 119.40024 * 180.29310 * 16 15 14 40 40 H 1.08004 * 120.27385 * 179.72062 * 17 16 15 41 41 H 1.08003 * 120.82888 * 180.02562 * 18 17 16 42 42 H 1.08999 * 109.46590 * 180.02562 * 22 11 10 43 43 H 1.08997 * 109.46950 * 60.00094 * 22 11 10 44 44 H 1.08997 * 109.47594 * 299.99999 * 23 22 11 45 45 H 1.09005 * 109.47308 * 180.02562 * 23 22 11 46 46 H 1.08001 * 126.45754 * 180.26433 * 24 3 2 47 47 H 1.08992 * 109.47089 * 269.97044 * 28 27 25 48 48 H 0.96693 * 114.00369 * 179.97438 * 29 28 27 49 49 H 1.48495 * 110.00101 * 59.99639 * 30 28 27 50 50 H 1.48498 * 110.00062 * 181.32176 * 30 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5123 -0.0006 5 8 0.6246 2.7643 0.0844 6 7 2.7086 3.5142 -0.0952 7 6 2.2485 4.9005 -0.2080 8 1 1.3415 5.0315 0.3821 9 6 3.3360 5.8427 0.3122 10 6 2.8553 7.2905 0.1950 11 6 2.5601 7.6126 -1.2713 12 1 3.4669 7.4820 -1.8617 13 8 2.1117 8.9650 -1.3809 14 6 3.0592 9.9132 -1.5772 15 7 4.3318 9.5643 -1.6529 16 6 5.2864 10.4541 -1.8480 17 6 4.9960 11.8003 -1.9719 18 6 3.6802 12.2228 -1.8953 19 6 2.6842 11.2608 -1.6927 20 6 1.3071 11.6441 -1.6065 21 7 0.2143 11.9472 -1.5408 22 6 1.4726 6.6704 -1.7915 23 6 1.9533 5.2227 -1.6743 24 6 3.5781 0.6891 0.0065 25 6 3.5529 -0.7094 0.0045 26 35 5.0609 -1.8503 0.0117 27 6 2.2559 -1.1015 -0.0036 28 6 1.7714 -2.5285 -0.0089 29 8 0.5099 -2.6058 0.6581 30 14 3.0075 -3.6073 0.8738 31 1 -0.3633 -0.1036 -1.0224 32 1 -0.3634 -0.8336 0.6009 33 1 -0.3633 0.9373 0.4215 34 1 3.6583 3.3174 -0.0886 35 1 3.5459 5.6134 1.3570 36 1 4.2430 5.7116 -0.2779 37 1 1.9484 7.4211 0.7854 38 1 3.6298 7.9617 0.5660 39 1 6.3133 10.1253 -1.9083 40 1 5.7895 12.5164 -2.1268 41 1 3.4283 13.2688 -1.9895 42 1 1.2627 6.8997 -2.8363 43 1 0.5658 6.8012 -1.2011 44 1 2.8601 5.0920 -2.2647 45 1 1.1788 4.5515 -2.0453 46 1 4.4582 1.3151 0.0122 47 1 1.6600 -2.8705 -1.0377 48 1 0.1370 -3.4973 0.6922 49 1 3.1685 -3.1512 2.2778 50 1 2.5569 -5.0220 0.8477 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16903866_5000100.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:17:25 Heat of formation + Delta-G solvation = 12.981788 kcal Electronic energy + Delta-G solvation = -36494.721672 eV Core-core repulsion = 31536.108305 eV Total energy + Delta-G solvation = -4958.613366 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 461.078 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -42.87800 -41.95901 -40.85753 -39.71869 -38.10601 -37.90769 -37.72835 -35.29769 -34.47280 -33.71356 -32.62469 -31.97657 -31.78441 -31.27795 -29.74226 -27.39042 -26.89095 -25.71500 -24.83533 -23.90160 -23.47643 -22.66369 -21.50139 -21.30664 -20.47526 -20.21336 -19.38589 -18.88897 -18.63274 -17.98910 -17.43845 -17.20520 -16.96297 -16.74976 -16.27456 -16.20034 -16.01569 -15.65057 -15.45474 -15.18381 -15.04180 -14.77777 -14.74020 -14.70893 -14.38318 -14.31817 -14.29644 -14.15012 -14.07344 -13.98028 -13.89959 -13.72905 -13.33415 -13.28066 -13.08375 -12.91524 -12.84676 -12.75680 -12.71156 -12.24638 -12.19501 -11.98203 -11.58822 -11.50588 -11.31958 -11.18528 -10.95652 -10.82038 -10.71241 -10.23381 -9.87240 -9.57672 -9.30430 -4.69272 -0.40285 0.14377 0.23633 0.35022 0.89861 1.23524 1.41642 1.51213 1.56720 1.81090 1.90025 1.94772 2.13578 2.27282 2.72688 2.81271 2.89916 3.28320 3.42652 3.49314 3.58093 3.60539 3.75446 3.79330 3.93170 3.98439 4.06296 4.10022 4.18719 4.19309 4.21285 4.27859 4.29145 4.29641 4.38674 4.42407 4.48035 4.56172 4.66698 4.74803 4.76050 4.85213 4.96257 4.98298 5.04769 5.06085 5.11848 5.19351 5.20623 5.26237 5.41503 5.46929 5.61610 5.78989 6.11158 6.37280 6.39967 6.42747 6.72919 7.05303 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.391 5.391 3 C -0.063 4.063 4 C 0.592 3.408 5 O -0.579 6.579 6 N -0.695 5.695 7 C 0.147 3.853 8 H 0.068 0.932 9 C -0.110 4.110 10 C -0.126 4.126 11 C 0.092 3.908 12 H 0.106 0.894 13 O -0.317 6.317 14 C 0.357 3.643 15 N -0.546 5.546 16 C 0.174 3.826 17 C -0.198 4.198 18 C 0.014 3.986 19 C -0.130 4.130 20 C 0.283 3.717 21 N -0.467 5.467 22 C -0.113 4.113 23 C -0.115 4.115 24 C -0.087 4.087 25 C -0.194 4.194 26 Br 0.095 6.905 27 C 0.093 3.907 28 C -0.044 4.044 29 O -0.557 6.557 30 Si 0.622 3.378 31 H 0.082 0.918 32 H 0.111 0.889 33 H 0.092 0.908 34 H 0.420 0.580 35 H 0.086 0.914 36 H 0.100 0.900 37 H 0.058 0.942 38 H 0.080 0.920 39 H 0.204 0.796 40 H 0.185 0.815 41 H 0.172 0.828 42 H 0.074 0.926 43 H 0.059 0.941 44 H 0.091 0.909 45 H 0.058 0.942 46 H 0.194 0.806 47 H 0.111 0.889 48 H 0.402 0.598 49 H -0.297 1.297 50 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.812 0.208 -3.727 13.345 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.062 5.062 3 C -0.177 4.177 4 C 0.380 3.620 5 O -0.461 6.461 6 N -0.347 5.347 7 C 0.042 3.958 8 H 0.086 0.914 9 C -0.147 4.147 10 C -0.165 4.165 11 C 0.036 3.964 12 H 0.124 0.876 13 O -0.224 6.224 14 C 0.176 3.824 15 N -0.270 5.270 16 C 0.018 3.982 17 C -0.218 4.218 18 C -0.014 4.014 19 C -0.137 4.137 20 C -0.031 4.031 21 N -0.144 5.144 22 C -0.151 4.151 23 C -0.153 4.153 24 C -0.113 4.113 25 C -0.280 4.280 26 Br 0.179 6.821 27 C -0.029 4.029 28 C -0.154 4.154 29 O -0.368 6.368 30 Si 0.524 3.476 31 H 0.101 0.899 32 H 0.129 0.871 33 H 0.111 0.889 34 H 0.258 0.742 35 H 0.104 0.896 36 H 0.119 0.881 37 H 0.077 0.923 38 H 0.098 0.902 39 H 0.221 0.779 40 H 0.202 0.798 41 H 0.189 0.811 42 H 0.093 0.907 43 H 0.078 0.922 44 H 0.110 0.890 45 H 0.076 0.924 46 H 0.211 0.789 47 H 0.129 0.871 48 H 0.254 0.746 49 H -0.223 1.223 50 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 10.560 -0.322 -2.734 10.913 hybrid contribution -1.774 0.280 0.281 1.818 sum 8.786 -0.042 -2.453 9.122 Atomic orbital electron populations 1.22609 0.74619 1.06155 1.04701 1.43921 1.07757 1.04036 1.50512 1.20211 0.90519 0.87760 1.19186 1.16990 0.85466 0.83835 0.75694 1.90795 1.17879 1.85037 1.52341 1.45506 1.10260 1.05317 1.73583 1.21046 0.98660 0.79583 0.96478 0.91356 1.21668 0.98044 0.91734 1.03299 1.21841 1.02100 0.97317 0.95206 1.22606 0.99068 0.76632 0.98058 0.87574 1.86288 1.33256 1.18123 1.84688 1.19852 0.87212 0.86304 0.89028 1.67510 0.98947 1.39881 1.20669 1.23491 0.98976 0.89096 0.86626 1.22397 0.96967 0.98118 1.04285 1.21922 0.91298 0.99780 0.88373 1.16154 0.86539 0.92310 1.18661 1.25590 0.92631 0.92573 0.92343 1.81283 1.12708 1.09266 1.11161 1.21541 0.97933 0.93573 1.02092 1.21776 1.02620 0.94421 0.96520 1.21523 0.95569 0.92367 1.01866 1.20618 0.90295 0.95148 1.21908 1.96296 1.32299 1.56201 1.97336 1.20051 0.89452 0.88464 1.04980 1.24350 0.93261 0.94678 1.03094 1.86367 1.34175 1.36370 1.79893 0.92932 0.93680 0.77925 0.83060 0.89943 0.87085 0.88949 0.74163 0.89583 0.88149 0.92302 0.90157 0.77926 0.79758 0.81096 0.90733 0.92187 0.89015 0.92367 0.78917 0.87146 0.74568 1.22338 1.17719 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.30 10.30 127.77 1.32 1.62 16 2 N -0.39 -2.27 3.16 -519.62 -1.64 -3.91 16 3 C -0.06 -0.24 6.88 40.35 0.28 0.04 16 4 C 0.59 2.84 7.74 86.45 0.67 3.51 16 5 O -0.58 -7.22 14.17 -4.33 -0.06 -7.28 16 6 N -0.70 1.98 5.06 -446.50 -2.26 -0.28 16 7 C 0.15 -0.28 2.50 44.99 0.11 -0.17 16 8 H 0.07 0.28 7.51 -2.39 -0.02 0.26 16 9 C -0.11 0.72 5.39 30.60 0.16 0.88 16 10 C -0.13 0.31 5.54 30.60 0.17 0.48 16 11 C 0.09 -0.05 2.38 30.60 0.07 0.02 16 12 H 0.11 -0.26 6.99 -2.39 -0.02 -0.28 16 13 O -0.32 -1.48 9.20 -87.72 -0.81 -2.29 16 14 C 0.36 0.58 7.47 85.16 0.64 1.22 16 15 N -0.55 1.59 8.64 -307.97 -2.66 -1.07 16 16 C 0.17 -1.67 11.16 84.68 0.95 -0.72 16 17 C -0.20 2.25 10.09 22.32 0.23 2.47 16 18 C 0.01 -0.09 9.90 22.72 0.23 0.13 16 19 C -0.13 -0.12 5.77 -21.10 -0.12 -0.25 16 20 C 0.28 2.24 14.91 88.33 1.32 3.56 16 21 N -0.47 -6.56 18.54 19.00 0.35 -6.21 16 22 C -0.11 -0.05 5.57 30.59 0.17 0.12 16 23 C -0.11 0.19 5.50 30.59 0.17 0.36 16 24 C -0.09 0.11 10.34 22.58 0.23 0.34 16 25 C -0.19 -0.21 6.16 22.03 0.14 -0.07 16 26 Br 0.10 -0.24 28.24 -20.37 -0.58 -0.81 16 27 C 0.09 0.36 6.18 41.34 0.26 0.62 16 28 C -0.04 -0.04 2.98 71.24 0.21 0.18 16 29 O -0.56 -0.57 9.80 -148.98 -1.46 -2.03 16 30 Si 0.62 1.57 27.10 68.60 1.86 3.43 16 31 H 0.08 0.25 8.14 -2.39 -0.02 0.23 16 32 H 0.11 0.47 5.49 -2.39 -0.01 0.46 16 33 H 0.09 0.78 5.92 -2.39 -0.01 0.77 16 34 H 0.42 -4.04 7.50 -92.71 -0.70 -4.73 16 35 H 0.09 -0.62 8.14 -2.38 -0.02 -0.64 16 36 H 0.10 -1.07 8.14 -2.39 -0.02 -1.09 16 37 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 38 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 39 H 0.20 -3.39 8.06 -2.91 -0.02 -3.42 16 40 H 0.19 -3.31 8.06 -2.91 -0.02 -3.33 16 41 H 0.17 -1.91 8.06 -2.91 -0.02 -1.93 16 42 H 0.07 0.06 8.14 -2.39 -0.02 0.05 16 43 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 44 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 45 H 0.06 0.16 8.14 -2.38 -0.02 0.14 16 46 H 0.19 -1.82 7.45 -2.91 -0.02 -1.85 16 47 H 0.11 -0.41 7.96 -2.39 -0.02 -0.43 16 48 H 0.40 -2.74 8.74 -74.06 -0.65 -3.38 16 49 H -0.30 -3.35 7.11 99.48 0.71 -2.65 16 50 H -0.25 -1.26 7.11 99.48 0.71 -0.55 16 Total: 0.00 -28.63 429.91 -0.35 -28.98 By element: Atomic # 1 Polarization: -22.59 SS G_CDS: -0.28 Total: -22.87 kcal Atomic # 6 Polarization: 7.16 SS G_CDS: 7.19 Total: 14.35 kcal Atomic # 7 Polarization: -5.26 SS G_CDS: -6.21 Total: -11.48 kcal Atomic # 8 Polarization: -9.27 SS G_CDS: -2.33 Total: -11.60 kcal Atomic # 14 Polarization: 1.57 SS G_CDS: 1.86 Total: 3.43 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.58 Total: -0.81 kcal Total: -28.63 -0.35 -28.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16903866_5000100.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.961 kcal (2) G-P(sol) polarization free energy of solvation -28.631 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.330 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.348 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.979 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.982 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds