Wall clock time and date at job start Sun Mar 7 2021 07:17:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.43206 * 179.97438 * 2 1 4 4 C 1.39943 * 120.59654 * 211.67128 * 3 2 1 5 5 C 1.38415 * 118.34195 * 180.26448 * 4 3 2 6 6 C 1.38275 * 119.46016 * 359.74821 * 5 4 3 7 7 N 1.31935 * 121.19151 * 359.97438 * 6 5 4 8 8 C 1.32177 * 121.80877 * 0.02562 * 7 6 5 9 9 O 1.35474 * 119.80037 * 179.97438 * 8 7 6 10 10 C 1.42897 * 117.00369 * 0.02562 * 9 8 7 11 11 H 1.09001 * 109.46873 * 329.99644 * 10 9 8 12 12 C 1.52992 * 109.47213 * 90.00102 * 10 9 8 13 13 C 1.53002 * 109.47128 * 179.97438 * 12 10 9 14 14 C 1.52995 * 109.47295 * 300.00458 * 13 12 10 15 15 H 1.09001 * 109.46609 * 299.99297 * 14 13 12 16 16 N 1.46500 * 109.47013 * 179.97438 * 14 13 12 17 17 C 1.34779 * 120.00236 * 84.99566 * 16 14 13 18 18 O 1.21285 * 119.99718 * 0.02562 * 17 16 14 19 19 C 1.50701 * 120.00176 * 179.97438 * 17 16 14 20 20 O 1.42896 * 109.47108 * 179.97438 * 19 17 16 21 21 C 1.35914 * 117.00301 * 180.02562 * 20 19 17 22 22 C 1.38788 * 120.06155 * 180.02562 * 21 20 19 23 23 Br 1.89100 * 120.03783 * 0.02562 * 22 21 20 24 24 C 1.38241 * 119.92595 * 179.72777 * 22 21 20 25 25 C 1.38244 * 120.04798 * 0.22701 * 24 22 21 26 26 C 1.50696 * 119.94124 * 180.02562 * 25 24 22 27 27 O 1.42902 * 109.47276 * 65.00381 * 26 25 24 28 28 Si 1.86303 * 109.46967 * 185.00477 * 26 25 24 29 29 C 1.38284 * 120.11546 * 0.05206 * 25 24 22 30 30 C 1.38137 * 120.07158 * 359.96969 * 29 25 24 31 31 C 1.52992 * 109.47407 * 59.99713 * 14 13 12 32 32 C 1.53002 * 109.47283 * 300.00028 * 31 14 13 33 33 H 1.08001 * 120.82871 * 0.02562 * 4 3 2 34 34 H 1.07996 * 120.27166 * 179.76418 * 5 4 3 35 35 H 1.08003 * 119.40476 * 179.97438 * 6 5 4 36 36 H 1.08999 * 109.47371 * 300.00054 * 12 10 9 37 37 H 1.08999 * 109.47145 * 60.00598 * 12 10 9 38 38 H 1.08998 * 109.47021 * 179.97438 * 13 12 10 39 39 H 1.09007 * 109.46617 * 60.00143 * 13 12 10 40 40 H 0.96996 * 120.00127 * 264.99851 * 16 14 13 41 41 H 1.09004 * 109.46465 * 60.00531 * 19 17 16 42 42 H 1.09001 * 109.47139 * 300.00434 * 19 17 16 43 43 H 1.07998 * 119.97493 * 180.25621 * 24 22 21 44 44 H 1.08998 * 109.47532 * 305.00198 * 26 25 24 45 45 H 0.96703 * 113.99460 * 59.99719 * 27 26 25 46 46 H 1.48494 * 110.00153 * 58.68142 * 28 26 25 47 47 H 1.48501 * 109.99889 * 180.02562 * 28 26 25 48 48 H 1.07998 * 119.95921 * 179.97438 * 29 25 24 49 49 H 1.08001 * 120.02240 * 180.02562 * 30 29 25 50 50 H 1.09001 * 109.47575 * 60.00176 * 31 14 13 51 51 H 1.08999 * 109.47371 * 180.02562 * 31 14 13 52 52 H 1.08998 * 109.47176 * 180.02562 * 32 31 14 53 53 H 1.09001 * 109.46935 * 300.00539 * 32 31 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2799 1.0262 0.6325 5 6 4.6630 0.9834 0.5991 6 6 5.2956 -0.0629 -0.0467 7 7 4.6047 -1.0225 -0.6319 8 6 3.2829 -1.0301 -0.6297 9 8 2.6144 -2.0356 -1.2438 10 6 3.4015 -3.0504 -1.8703 11 1 4.3423 -2.6202 -2.2137 12 6 3.6882 -4.1672 -0.8647 13 6 4.5304 -5.2540 -1.5358 14 6 3.7654 -5.8273 -2.7303 15 1 2.8245 -6.2572 -2.3866 16 7 4.5721 -6.8675 -3.3732 17 6 4.5362 -8.1320 -2.9080 18 8 3.8356 -8.4088 -1.9575 19 6 5.3657 -9.2021 -3.5698 20 8 5.1587 -10.4474 -2.9001 21 6 5.8387 -11.5241 -3.3752 22 6 5.6846 -12.7648 -2.7728 23 35 4.5274 -12.9600 -1.2899 24 6 6.3733 -13.8592 -3.2618 25 6 7.2182 -13.7171 -4.3467 26 6 7.9673 -14.9118 -4.8782 27 8 7.0377 -15.8630 -5.4011 28 14 9.1255 -14.3667 -6.2318 29 6 7.3775 -12.4805 -4.9448 30 6 6.6921 -11.3836 -4.4598 31 6 3.4787 -4.7106 -3.7359 32 6 2.6364 -3.6238 -3.0649 33 1 2.7629 1.8329 1.1308 34 1 5.2433 1.7607 1.0738 35 1 6.3748 -0.0952 -0.0725 36 1 4.2329 -3.7586 -0.0135 37 1 2.7473 -4.5974 -0.5215 38 1 4.7350 -6.0494 -0.8192 39 1 5.4713 -4.8241 -1.8794 40 1 5.1322 -6.6463 -4.1336 41 1 6.4200 -8.9309 -3.5141 42 1 5.0696 -9.2973 -4.6145 43 1 6.2508 -14.8260 -2.7962 44 1 8.5406 -15.3694 -4.0720 45 1 6.4923 -15.5234 -6.1238 46 1 10.0770 -13.3537 -5.7087 47 1 9.8699 -15.5359 -6.7648 48 1 8.0385 -12.3723 -5.7919 49 1 6.8168 -10.4183 -4.9278 50 1 4.4195 -4.2806 -4.0796 51 1 2.9332 -5.1189 -4.5867 52 1 2.4317 -2.8284 -3.7815 53 1 1.6955 -4.0537 -2.7212 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16903866_6201210.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:17:35 Heat of formation + Delta-G solvation = -36.822029 kcal Electronic energy + Delta-G solvation = -39059.001563 eV Core-core repulsion = 33716.746120 eV Total energy + Delta-G solvation = -5342.255443 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 488.083 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -41.99964 -41.67958 -40.92282 -39.88293 -39.11569 -38.00896 -37.73946 -37.18627 -35.02981 -33.73658 -33.60507 -32.08989 -31.93748 -31.82749 -30.80163 -30.24382 -28.70222 -26.33062 -25.74585 -24.89022 -24.09020 -23.85792 -22.96566 -22.34849 -21.61922 -21.16179 -20.26793 -19.56794 -19.40915 -18.58847 -18.16757 -17.92078 -17.49106 -17.30624 -17.07281 -16.87335 -16.45719 -16.21520 -16.03777 -15.95811 -15.69255 -15.55424 -15.29730 -15.10292 -15.01733 -14.76851 -14.70489 -14.45459 -14.40202 -14.30543 -14.16730 -13.97591 -13.92373 -13.82449 -13.77680 -13.65517 -13.33975 -13.13326 -12.99150 -12.76145 -12.34313 -12.25324 -12.17575 -12.13569 -12.11262 -11.90917 -11.83328 -11.56422 -11.31017 -11.23731 -10.98331 -10.96881 -10.73480 -10.41851 -10.16744 -9.97305 -9.59889 -9.31790 -4.97254 -0.42549 -0.04968 0.12335 0.21311 0.64232 1.34431 1.41021 1.48257 1.50441 1.67864 1.81060 1.88469 2.03088 2.40256 2.51848 2.70836 2.79040 3.26399 3.47000 3.49920 3.54873 3.58314 3.66899 3.76314 3.77012 3.84226 3.93454 3.95763 4.02648 4.05157 4.10028 4.12679 4.13172 4.17382 4.27580 4.30401 4.33542 4.37914 4.46893 4.51240 4.58544 4.64923 4.75874 4.84555 4.85453 4.94225 4.98576 5.00791 5.03714 5.05791 5.09100 5.18639 5.21508 5.24233 5.41571 5.44697 5.49735 6.07974 6.09145 6.35853 6.49268 6.70542 6.79935 7.18128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.465 5.465 2 C 0.283 3.717 3 C -0.129 4.129 4 C 0.014 3.986 5 C -0.198 4.198 6 C 0.173 3.827 7 N -0.549 5.549 8 C 0.357 3.643 9 O -0.316 6.316 10 C 0.092 3.908 11 H 0.107 0.893 12 C -0.127 4.127 13 C -0.115 4.115 14 C 0.145 3.855 15 H 0.061 0.939 16 N -0.703 5.703 17 C 0.511 3.489 18 O -0.570 6.570 19 C 0.032 3.968 20 O -0.307 6.307 21 C 0.149 3.851 22 C -0.146 4.146 23 Br -0.057 7.057 24 C -0.037 4.037 25 C -0.153 4.153 26 C -0.077 4.077 27 O -0.558 6.558 28 Si 0.789 3.211 29 C -0.052 4.052 30 C -0.188 4.188 31 C -0.108 4.108 32 C -0.115 4.115 33 H 0.173 0.827 34 H 0.185 0.815 35 H 0.203 0.797 36 H 0.067 0.933 37 H 0.051 0.949 38 H 0.050 0.950 39 H 0.092 0.908 40 H 0.424 0.576 41 H 0.132 0.868 42 H 0.135 0.865 43 H 0.133 0.867 44 H 0.103 0.897 45 H 0.396 0.604 46 H -0.275 1.275 47 H -0.305 1.305 48 H 0.169 0.831 49 H 0.183 0.817 50 H 0.102 0.898 51 H 0.093 0.907 52 H 0.086 0.914 53 H 0.061 0.939 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.478 8.139 -9.136 16.776 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.142 5.142 2 C -0.032 4.032 3 C -0.136 4.136 4 C -0.013 4.013 5 C -0.218 4.218 6 C 0.017 3.983 7 N -0.272 5.272 8 C 0.175 3.825 9 O -0.222 6.222 10 C 0.037 3.963 11 H 0.125 0.875 12 C -0.166 4.166 13 C -0.153 4.153 14 C 0.041 3.959 15 H 0.080 0.920 16 N -0.357 5.357 17 C 0.297 3.703 18 O -0.448 6.448 19 C -0.045 4.045 20 O -0.219 6.219 21 C 0.101 3.899 22 C -0.226 4.226 23 Br 0.028 6.972 24 C -0.057 4.057 25 C -0.155 4.155 26 C -0.186 4.186 27 O -0.367 6.367 28 Si 0.694 3.306 29 C -0.070 4.070 30 C -0.207 4.207 31 C -0.145 4.145 32 C -0.154 4.154 33 H 0.190 0.810 34 H 0.202 0.798 35 H 0.219 0.781 36 H 0.085 0.915 37 H 0.070 0.930 38 H 0.069 0.931 39 H 0.110 0.890 40 H 0.262 0.738 41 H 0.150 0.850 42 H 0.153 0.847 43 H 0.151 0.849 44 H 0.121 0.879 45 H 0.246 0.754 46 H -0.202 1.202 47 H -0.233 1.233 48 H 0.186 0.814 49 H 0.200 0.800 50 H 0.120 0.880 51 H 0.111 0.889 52 H 0.105 0.895 53 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges 9.854 6.801 -8.019 14.410 hybrid contribution -0.120 0.106 1.070 1.082 sum 9.734 6.907 -6.949 13.811 Atomic orbital electron populations 1.81281 1.13379 1.09176 1.10368 1.25557 0.92550 0.92575 0.92471 1.16151 0.84447 1.00843 1.12152 1.21931 0.94945 0.94062 0.90409 1.22393 0.93809 1.02075 1.03484 1.23471 1.01983 0.86198 0.86684 1.67497 1.05041 1.30252 1.24423 1.19862 0.88189 0.86132 0.88281 1.86292 1.36684 1.32915 1.66350 1.22627 0.95786 0.85440 0.92493 0.87513 1.21832 1.00281 0.95800 0.98645 1.21750 0.99507 0.97023 0.97060 1.20973 0.94005 0.87675 0.93292 0.92028 1.45650 1.47739 1.06681 1.35634 1.20571 0.82065 0.84127 0.83531 1.90803 1.42366 1.82227 1.29397 1.22887 1.02404 0.80896 0.98331 1.86251 1.63865 1.16110 1.55700 1.18813 0.92033 0.85886 0.93182 1.21281 1.05918 0.95065 1.00297 1.96762 1.62793 1.97955 1.39703 1.20873 0.93255 0.96662 0.94907 1.20374 1.00801 0.96583 0.97720 1.25298 0.97761 0.90004 1.05523 1.86493 1.54509 1.39338 1.56320 0.93804 0.77832 0.78014 0.80953 1.21263 0.96695 0.90685 0.98333 1.21593 0.99253 1.02576 0.97243 1.21681 1.02160 0.93360 0.97344 1.21592 0.99025 0.98969 0.95764 0.80995 0.79752 0.78082 0.91462 0.92994 0.93149 0.88994 0.73763 0.85006 0.84726 0.84864 0.87949 0.75413 1.20183 1.23326 0.81442 0.79984 0.87981 0.88855 0.89517 0.92041 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -6.45 18.54 19.01 0.35 -6.10 16 2 C 0.28 2.24 14.91 88.33 1.32 3.56 16 3 C -0.13 -0.16 5.76 -21.10 -0.12 -0.29 16 4 C 0.01 -0.09 9.90 22.73 0.23 0.14 16 5 C -0.20 2.12 10.09 22.32 0.23 2.35 16 6 C 0.17 -1.50 11.16 84.69 0.95 -0.56 16 7 N -0.55 1.10 8.64 -307.97 -2.66 -1.56 16 8 C 0.36 0.76 7.47 85.16 0.64 1.39 16 9 O -0.32 -1.48 9.20 -87.74 -0.81 -2.29 16 10 C 0.09 -0.07 2.38 30.59 0.07 0.01 16 11 H 0.11 -0.31 6.98 -2.39 -0.02 -0.32 16 12 C -0.13 -0.13 5.54 30.59 0.17 0.04 16 13 C -0.11 0.19 5.49 30.59 0.17 0.36 16 14 C 0.15 -0.47 2.45 44.99 0.11 -0.36 16 15 H 0.06 0.24 7.58 -2.39 -0.02 0.22 16 16 N -0.70 4.95 5.08 -442.54 -2.25 2.70 16 17 C 0.51 0.27 7.87 87.66 0.69 0.96 16 18 O -0.57 -7.73 16.16 15.99 0.26 -7.48 16 19 C 0.03 -0.21 5.22 71.24 0.37 0.17 16 20 O -0.31 -1.25 9.00 -73.55 -0.66 -1.91 16 21 C 0.15 0.25 6.68 22.52 0.15 0.40 16 22 C -0.15 -0.83 6.24 22.40 0.14 -0.69 16 23 Br -0.06 -0.58 33.16 -20.37 -0.68 -1.25 16 24 C -0.04 -0.11 9.42 22.27 0.21 0.10 16 25 C -0.15 0.32 5.35 -19.85 -0.11 0.21 16 26 C -0.08 0.20 2.80 71.23 0.20 0.40 16 27 O -0.56 0.49 12.83 -148.98 -1.91 -1.42 16 28 Si 0.79 -4.79 29.80 68.60 2.04 -2.74 16 29 C -0.05 0.36 8.66 22.26 0.19 0.56 16 30 C -0.19 1.25 9.04 22.36 0.20 1.45 16 31 C -0.11 0.91 5.39 30.59 0.16 1.08 16 32 C -0.12 0.38 5.57 30.60 0.17 0.55 16 33 H 0.17 -1.88 8.06 -2.91 -0.02 -1.90 16 34 H 0.19 -3.20 8.06 -2.91 -0.02 -3.23 16 35 H 0.20 -3.16 8.06 -2.91 -0.02 -3.18 16 36 H 0.07 0.16 8.14 -2.39 -0.02 0.14 16 37 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 38 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 39 H 0.09 -0.54 8.14 -2.38 -0.02 -0.56 16 40 H 0.42 -6.72 8.60 -92.71 -0.80 -7.52 16 41 H 0.13 -1.80 7.65 -2.38 -0.02 -1.82 16 42 H 0.14 -1.89 7.68 -2.39 -0.02 -1.91 16 43 H 0.13 0.51 8.06 -2.91 -0.02 0.48 16 44 H 0.10 -0.06 7.96 -2.39 -0.02 -0.08 16 45 H 0.40 -3.70 8.70 -74.06 -0.64 -4.34 16 46 H -0.28 0.75 7.11 99.48 0.71 1.45 16 47 H -0.30 -0.84 7.11 99.48 0.71 -0.13 16 48 H 0.17 -2.28 4.90 -2.91 -0.01 -2.29 16 49 H 0.18 -2.83 6.30 -2.91 -0.02 -2.85 16 50 H 0.10 -1.33 8.14 -2.39 -0.02 -1.35 16 51 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 52 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 53 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 Total: 0.00 -39.72 467.75 -0.58 -40.30 By element: Atomic # 1 Polarization: -29.69 SS G_CDS: -0.40 Total: -30.09 kcal Atomic # 6 Polarization: 5.70 SS G_CDS: 6.13 Total: 11.84 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -4.55 Total: -4.96 kcal Atomic # 8 Polarization: -9.97 SS G_CDS: -3.12 Total: -13.09 kcal Atomic # 14 Polarization: -4.79 SS G_CDS: 2.04 Total: -2.74 kcal Atomic # 35 Polarization: -0.58 SS G_CDS: -0.68 Total: -1.25 kcal Total: -39.72 -0.58 -40.30 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16903866_6201210.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.477 kcal (2) G-P(sol) polarization free energy of solvation -39.723 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.246 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.576 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.299 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds