Wall clock time and date at job start Sun Mar 7 2021 07:17:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.33818 * 122.44937 * 2 1 4 4 C 1.50698 * 124.52375 * 359.95284 * 3 2 1 5 5 O 1.42903 * 109.46994 * 314.83415 * 4 3 2 6 6 Si 1.86305 * 109.47209 * 194.83905 * 4 3 2 7 7 S 1.70624 * 110.95257 * 179.70265 * 3 2 1 8 8 C 1.75831 * 91.56063 * 0.35837 * 7 3 2 9 9 C 1.46587 * 125.45547 * 179.91382 * 8 7 3 10 10 O 1.21704 * 119.99996 * 179.69716 * 9 8 7 11 11 N 1.34778 * 119.99674 * 359.68992 * 9 8 7 12 12 C 1.46507 * 119.99660 * 180.02562 * 11 9 8 13 13 H 1.09004 * 109.46921 * 325.00245 * 12 11 9 14 14 C 1.52994 * 109.47179 * 85.00077 * 12 11 9 15 15 C 1.53001 * 109.47253 * 180.02562 * 14 12 11 16 16 C 1.52998 * 109.46904 * 300.00021 * 15 14 12 17 17 H 1.09004 * 109.47408 * 299.99803 * 16 15 14 18 18 O 1.42897 * 109.47196 * 179.97438 * 16 15 14 19 19 C 1.35477 * 117.00130 * 89.99625 * 18 16 15 20 20 N 1.32173 * 119.80109 * 0.02562 * 19 18 16 21 21 C 1.31936 * 121.80690 * 180.02562 * 20 19 18 22 22 C 1.38280 * 121.19457 * 359.97438 * 21 20 19 23 23 C 1.38417 * 119.45731 * 359.97438 * 22 21 20 24 24 C 1.39952 * 118.34441 * 0.02562 * 23 22 21 25 25 C 1.43195 * 120.59771 * 179.97438 * 24 23 22 26 26 N 9.75199 * 169.57943 * 181.34090 * 9 1 2 27 27 C 1.52994 * 109.47183 * 59.99936 * 16 15 14 28 28 C 1.52998 * 109.46984 * 205.00102 * 12 11 9 29 29 C 1.36642 * 109.08609 * 359.64784 * 8 7 3 30 30 H 1.09006 * 109.46789 * 275.77763 * 1 2 3 31 31 H 1.08996 * 109.47275 * 35.77556 * 1 2 3 32 32 H 1.08995 * 109.47470 * 155.77592 * 1 2 3 33 33 H 1.08998 * 109.47553 * 74.83628 * 4 3 2 34 34 H 0.96691 * 114.00129 * 180.02562 * 5 4 3 35 35 H 1.48497 * 109.99697 * 59.99254 * 6 4 3 36 36 H 1.48492 * 110.00072 * 181.31579 * 6 4 3 37 37 H 0.96993 * 120.00683 * 359.97438 * 11 9 8 38 38 H 1.09006 * 109.47420 * 299.99970 * 14 12 11 39 39 H 1.09000 * 109.47500 * 60.00024 * 14 12 11 40 40 H 1.09001 * 109.47475 * 180.02562 * 15 14 12 41 41 H 1.09000 * 109.46892 * 59.99599 * 15 14 12 42 42 H 1.07995 * 119.40373 * 180.27064 * 21 20 19 43 43 H 1.07997 * 120.27427 * 179.97438 * 22 21 20 44 44 H 1.07995 * 120.82753 * 180.02562 * 23 22 21 45 45 H 1.09000 * 109.47500 * 59.99879 * 27 16 15 46 46 H 1.09006 * 109.47420 * 179.97438 * 27 16 15 47 47 H 1.09001 * 109.46830 * 59.99921 * 28 12 11 48 48 H 1.08995 * 109.47445 * 300.00113 * 28 12 11 49 49 H 1.08004 * 123.35322 * 180.28263 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5162 -0.0010 5 8 0.5756 2.5825 -0.9572 6 14 2.9555 3.7517 -0.4505 7 16 3.8970 0.7892 0.0083 8 6 3.5937 -0.9427 0.0008 9 6 4.6231 -1.9863 0.0013 10 8 4.3001 -3.1597 0.0013 11 7 5.9273 -1.6463 0.0016 12 6 6.9561 -2.6893 0.0015 13 1 6.6118 -3.5393 0.5907 14 6 7.2251 -3.1403 -1.4355 15 6 8.2991 -4.2300 -1.4355 16 6 9.5880 -3.6757 -0.8253 17 1 9.9327 -2.8257 -1.4144 18 8 10.5909 -4.6935 -0.8247 19 6 11.3865 -4.7737 -1.9184 20 7 11.2123 -3.9299 -2.9207 21 6 11.9637 -3.9727 -4.0043 22 6 12.9732 -4.9080 -4.1393 23 6 13.2009 -5.8159 -3.1196 24 6 12.3914 -5.7516 -1.9798 25 6 12.5844 -6.6676 -0.8962 26 7 12.7392 -7.3927 -0.0365 27 6 9.3190 -3.2246 0.6117 28 6 8.2449 -2.1344 0.6115 29 6 2.2446 -1.1601 0.0004 30 1 -0.3633 0.1035 1.0225 31 1 -0.3633 0.8337 -0.6008 32 1 -0.3634 -0.9371 -0.4216 33 1 1.2453 2.7459 0.9904 34 1 0.1493 3.4486 -1.0124 35 1 3.4957 3.4493 -1.8003 36 1 2.3947 5.1263 -0.4241 37 1 6.1847 -0.7112 0.0011 38 1 6.3069 -3.5356 -1.8701 39 1 7.5693 -2.2904 -2.0247 40 1 8.4910 -4.5510 -2.4593 41 1 7.9544 -5.0798 -0.8464 42 1 11.7903 -3.2614 -4.7982 43 1 13.5792 -4.9299 -5.0331 44 1 13.9836 -6.5555 -3.2016 45 1 8.9743 -4.0745 1.2008 46 1 10.2374 -2.8301 1.0467 47 1 8.0532 -1.8131 1.6353 48 1 8.5891 -1.2844 0.0224 49 1 1.8019 -2.1452 0.0007 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16903866_6739946.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:17:57 Heat of formation + Delta-G solvation = -4.183564 kcal Electronic energy + Delta-G solvation = -33677.266366 eV Core-core repulsion = 29084.078674 eV Total energy + Delta-G solvation = -4593.187692 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.129 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.05232 -41.10300 -40.06583 -39.54193 -38.09594 -37.52578 -37.47790 -34.94425 -33.82433 -32.47311 -31.99457 -31.86850 -30.21056 -29.80855 -26.51576 -25.83483 -24.93732 -24.26896 -23.91556 -22.87668 -21.63186 -21.25553 -20.31232 -19.92165 -19.45904 -19.13250 -18.68662 -18.11867 -17.62786 -17.01808 -16.90863 -16.42916 -16.29847 -16.15424 -15.98713 -15.58779 -15.27450 -15.10230 -14.92203 -14.80713 -14.54514 -14.48052 -14.37263 -14.26855 -14.23839 -14.13884 -13.87973 -13.80474 -13.37793 -13.27367 -13.21330 -13.09774 -13.05138 -12.89945 -12.78105 -12.51767 -12.27512 -12.25399 -12.16098 -11.90541 -11.59932 -11.33807 -11.07096 -11.04549 -10.85683 -10.74054 -10.16169 -9.68877 -9.67877 -9.36368 -5.26092 -0.57754 -0.51709 0.05109 0.28799 0.68246 1.02653 1.35535 1.44509 1.63738 1.77344 1.78583 1.97694 2.05310 2.22993 2.74728 2.75342 3.06732 3.14544 3.47728 3.52918 3.58970 3.65068 3.69760 3.77792 3.87821 3.94240 4.03218 4.06953 4.14105 4.17967 4.24619 4.25432 4.30498 4.33663 4.42636 4.54407 4.61297 4.66125 4.68233 4.81672 4.83809 4.85109 4.88585 4.92515 4.99342 5.06997 5.08534 5.11565 5.17636 5.26405 5.41532 5.43167 5.50604 6.04473 6.23976 6.38552 6.48777 6.63926 7.13912 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.087 4.087 3 C -0.194 4.194 4 C -0.033 4.033 5 O -0.526 6.526 6 Si 0.651 3.349 7 S 0.200 5.800 8 C -0.262 4.262 9 C 0.595 3.405 10 O -0.523 6.523 11 N -0.724 5.724 12 C 0.143 3.857 13 H 0.095 0.905 14 C -0.124 4.124 15 C -0.132 4.132 16 C 0.088 3.912 17 H 0.097 0.903 18 O -0.292 6.292 19 C 0.372 3.628 20 N -0.536 5.536 21 C 0.173 3.827 22 C -0.212 4.212 23 C 0.009 3.991 24 C -0.103 4.103 25 C 0.261 3.739 26 N -0.404 5.404 27 C -0.114 4.114 28 C -0.122 4.122 29 C -0.047 4.047 30 H 0.067 0.933 31 H 0.091 0.909 32 H 0.064 0.936 33 H 0.088 0.912 34 H 0.383 0.617 35 H -0.237 1.237 36 H -0.238 1.238 37 H 0.398 0.602 38 H 0.076 0.924 39 H 0.071 0.929 40 H 0.074 0.926 41 H 0.074 0.926 42 H 0.170 0.830 43 H 0.151 0.849 44 H 0.153 0.847 45 H 0.079 0.921 46 H 0.080 0.920 47 H 0.082 0.918 48 H 0.075 0.925 49 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.045 8.169 -2.637 8.825 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.100 4.100 3 C -0.313 4.313 4 C -0.144 4.144 5 O -0.334 6.334 6 Si 0.548 3.452 7 S 0.468 5.532 8 C -0.382 4.382 9 C 0.381 3.619 10 O -0.401 6.401 11 N -0.375 5.375 12 C 0.039 3.961 13 H 0.113 0.887 14 C -0.163 4.163 15 C -0.170 4.170 16 C 0.032 3.968 17 H 0.115 0.885 18 O -0.198 6.198 19 C 0.190 3.810 20 N -0.260 5.260 21 C 0.016 3.984 22 C -0.233 4.233 23 C -0.018 4.018 24 C -0.109 4.109 25 C -0.056 4.056 26 N -0.080 5.080 27 C -0.153 4.153 28 C -0.160 4.160 29 C -0.081 4.081 30 H 0.086 0.914 31 H 0.110 0.890 32 H 0.083 0.917 33 H 0.106 0.894 34 H 0.232 0.768 35 H -0.161 1.161 36 H -0.161 1.161 37 H 0.233 0.767 38 H 0.095 0.905 39 H 0.089 0.911 40 H 0.093 0.907 41 H 0.093 0.907 42 H 0.187 0.813 43 H 0.169 0.831 44 H 0.170 0.830 45 H 0.098 0.902 46 H 0.099 0.901 47 H 0.101 0.899 48 H 0.094 0.906 49 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.127 7.595 -1.597 8.367 hybrid contribution -1.849 -0.233 -0.935 2.085 sum 1.278 7.362 -2.532 7.889 Atomic orbital electron populations 1.20722 0.88956 1.03899 1.02722 1.18696 0.98411 0.90642 1.02258 1.23195 0.98114 0.98460 1.11558 1.24031 0.96792 0.98002 0.95581 1.86570 1.48759 1.37067 1.60998 0.95492 0.83452 0.79162 0.87054 1.82593 1.02675 0.98775 1.69124 1.24604 0.97961 0.96765 1.18838 1.16930 0.81584 0.87393 0.76005 1.90864 1.81548 1.18136 1.49525 1.45897 1.05293 1.10167 1.76144 1.21108 0.86805 0.91087 0.97107 0.88663 1.21858 0.99209 0.98750 0.96496 1.21912 0.93873 0.99049 1.02159 1.22585 0.86080 0.89989 0.98105 0.88465 1.86312 1.44091 1.54375 1.35009 1.19735 0.86857 0.88273 0.86142 1.67453 1.30302 1.25847 1.02362 1.22790 0.88090 0.94659 0.92847 1.22001 1.01847 0.98177 1.01230 1.21591 0.94847 0.96021 0.89362 1.15924 1.02148 0.98503 0.94362 1.25029 0.94226 0.93280 0.93016 1.81250 1.07560 1.09774 1.09395 1.21570 0.99526 0.99253 0.94906 1.21765 0.93422 0.98395 1.02398 1.20721 0.90938 1.00085 0.96335 0.91414 0.89005 0.91653 0.89408 0.76836 1.16052 1.16127 0.76715 0.90531 0.91074 0.90687 0.90731 0.81297 0.83150 0.82976 0.90239 0.90143 0.89899 0.90608 0.82741 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.06 9.74 36.01 0.35 0.29 16 2 C -0.09 -0.14 5.74 -106.45 -0.61 -0.75 16 3 C -0.19 -0.11 5.65 -35.86 -0.20 -0.31 16 4 C -0.03 0.04 2.69 36.00 0.10 0.14 16 5 O -0.53 0.36 10.17 -35.23 -0.36 0.00 16 6 Si 0.65 -1.29 30.99 -169.99 -5.27 -6.56 16 7 S 0.20 -0.16 19.36 -107.50 -2.08 -2.24 16 8 C -0.26 -0.48 6.45 -36.79 -0.24 -0.72 16 9 C 0.59 1.67 7.75 -12.89 -0.10 1.57 16 10 O -0.52 -3.38 16.50 5.19 0.09 -3.29 16 11 N -0.72 0.22 5.07 -55.14 -0.28 -0.06 16 12 C 0.14 -0.07 2.45 -67.93 -0.17 -0.24 16 13 H 0.10 0.13 7.58 -51.93 -0.39 -0.26 16 14 C -0.12 0.03 5.49 -26.73 -0.15 -0.12 16 15 C -0.13 -0.01 5.54 -26.73 -0.15 -0.16 16 16 C 0.09 -0.02 2.38 -26.73 -0.06 -0.09 16 17 H 0.10 -0.05 6.99 -51.93 -0.36 -0.42 16 18 O -0.29 -0.53 9.20 -18.12 -0.17 -0.69 16 19 C 0.37 0.38 7.47 -16.61 -0.12 0.26 16 20 N -0.54 0.13 8.64 -12.97 -0.11 0.02 16 21 C 0.17 -0.49 11.16 -17.49 -0.20 -0.69 16 22 C -0.21 0.80 10.09 -39.50 -0.40 0.40 16 23 C 0.01 -0.02 9.90 -38.87 -0.38 -0.41 16 24 C -0.10 -0.05 5.77 -106.53 -0.61 -0.67 16 25 C 0.26 0.82 14.91 -22.50 -0.34 0.49 16 26 N -0.40 -2.33 18.53 41.80 0.77 -1.56 16 27 C -0.11 0.16 5.57 -26.71 -0.15 0.01 16 28 C -0.12 0.32 5.40 -26.70 -0.14 0.17 16 29 C -0.05 -0.11 9.78 -40.44 -0.40 -0.50 16 30 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 31 H 0.09 0.08 5.49 -51.93 -0.28 -0.20 16 32 H 0.06 0.02 8.10 -51.93 -0.42 -0.41 16 33 H 0.09 -0.26 7.96 -51.93 -0.41 -0.68 16 34 H 0.38 -1.80 8.74 45.56 0.40 -1.40 16 35 H -0.24 -0.27 7.11 56.52 0.40 0.13 16 36 H -0.24 0.13 7.11 56.52 0.40 0.53 16 37 H 0.40 -1.08 7.72 -40.82 -0.31 -1.39 16 38 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 39 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 42 H 0.17 -0.96 8.06 -52.49 -0.42 -1.38 16 43 H 0.15 -0.95 8.06 -52.49 -0.42 -1.37 16 44 H 0.15 -0.69 8.06 -52.49 -0.42 -1.11 16 45 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 47 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 48 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 49 H 0.16 0.34 8.06 -52.48 -0.42 -0.09 16 LS Contribution 424.69 15.07 6.40 6.40 Total: 0.00 -10.24 424.69 -11.46 -21.70 By element: Atomic # 1 Polarization: -5.92 SS G_CDS: -6.49 Total: -12.40 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -3.97 Total: -1.32 kcal Atomic # 7 Polarization: -1.98 SS G_CDS: 0.38 Total: -1.59 kcal Atomic # 8 Polarization: -3.54 SS G_CDS: -0.44 Total: -3.98 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.27 Total: -6.56 kcal Atomic # 16 Polarization: -0.16 SS G_CDS: -2.08 Total: -2.24 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -10.24 -11.46 -21.70 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16903866_6739946.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.515 kcal (2) G-P(sol) polarization free energy of solvation -10.237 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.277 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.461 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.698 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.184 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds