Wall clock time and date at job start Sun Mar 7 2021 12:10:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86298 * 109.47278 * 2 1 4 4 C 1.86301 * 109.46970 * 239.99680 * 2 1 3 5 5 C 1.86812 * 109.46831 * 120.00068 * 2 1 3 6 6 C 1.38496 * 120.37953 * 270.02029 * 5 2 1 7 7 C 1.39281 * 118.36062 * 179.97438 * 6 5 2 8 8 N 1.39952 * 120.48868 * 180.02562 * 7 6 5 9 9 C 1.34777 * 120.00084 * 32.66132 * 8 7 6 10 10 O 1.21286 * 119.99920 * 5.26167 * 9 8 7 11 11 C 1.50699 * 120.00072 * 185.26168 * 9 8 7 12 12 C 1.52999 * 109.47149 * 180.02562 * 11 9 8 13 13 O 1.42898 * 109.47086 * 180.02562 * 12 11 9 14 14 C 1.35901 * 116.99940 * 179.97438 * 13 12 11 15 15 C 1.38736 * 120.05614 * 359.73056 * 14 13 12 16 16 C 1.38141 * 119.94558 * 179.74145 * 15 14 13 17 17 C 1.38272 * 120.05649 * 0.50486 * 16 15 14 18 18 C 1.50697 * 119.94755 * 179.74395 * 17 16 15 19 19 O 1.42900 * 109.47003 * 245.02453 * 18 17 16 20 20 Si 1.86298 * 109.46846 * 5.02522 * 18 17 16 21 21 H 1.48497 * 109.47385 * 59.99752 * 20 18 17 22 22 H 1.48502 * 109.47098 * 180.02562 * 20 18 17 23 23 H 1.48503 * 109.47182 * 299.99465 * 20 18 17 24 24 C 1.38273 * 120.10799 * 359.76766 * 17 16 15 25 25 C 1.38146 * 120.05540 * 359.97438 * 24 17 16 26 26 C 1.38842 * 119.02219 * 0.02562 * 7 6 5 27 27 N 1.31821 * 120.66500 * 359.97438 * 26 7 6 28 28 C 1.31855 * 121.79713 * 0.02562 * 27 26 7 29 29 H 1.09005 * 109.47308 * 300.00282 * 1 2 3 30 30 H 1.08998 * 109.47045 * 60.00072 * 1 2 3 31 31 H 1.09005 * 109.47458 * 179.97438 * 1 2 3 32 32 H 1.09005 * 109.46865 * 179.97438 * 3 2 1 33 33 H 1.08998 * 109.47024 * 299.99941 * 3 2 1 34 34 H 1.09005 * 109.47163 * 60.00197 * 3 2 1 35 35 H 1.08992 * 109.47352 * 299.99971 * 4 2 1 36 36 H 1.09003 * 109.47089 * 60.00716 * 4 2 1 37 37 H 1.09011 * 109.46845 * 180.02562 * 4 2 1 38 38 H 1.08006 * 120.82161 * 359.95578 * 6 5 2 39 39 H 0.97005 * 120.00206 * 212.65783 * 8 7 6 40 40 H 1.08999 * 109.47010 * 300.00381 * 11 9 8 41 41 H 1.09000 * 109.47010 * 59.99831 * 11 9 8 42 42 H 1.09009 * 109.46832 * 300.00029 * 12 11 9 43 43 H 1.09000 * 109.47406 * 59.99947 * 12 11 9 44 44 H 1.08002 * 120.02436 * 359.97438 * 15 14 13 45 45 H 1.07996 * 119.97404 * 180.22736 * 16 15 14 46 46 H 1.08994 * 109.46798 * 125.02361 * 18 17 16 47 47 H 0.96693 * 114.00120 * 60.00169 * 19 18 17 48 48 H 1.07993 * 119.96960 * 179.97438 * 24 17 16 49 49 H 1.08001 * 120.02818 * 179.97438 * 25 24 17 50 50 H 1.08005 * 119.67214 * 179.97438 * 26 7 6 51 51 H 1.07995 * 119.54233 * 180.27293 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4839 -0.8783 -1.5211 5 6 2.4856 -0.8807 1.5253 6 6 2.7186 -0.1762 2.6948 7 6 3.1821 -0.8750 3.8069 8 7 3.4318 -0.2076 5.0114 9 6 2.6819 0.8566 5.3603 10 8 1.7312 1.1779 4.6792 11 6 3.0248 1.6472 6.5965 12 6 2.0242 2.7927 6.7632 13 8 2.3498 3.5427 7.9351 14 6 1.5532 4.6037 8.2296 15 6 0.4836 4.9198 7.4044 16 6 -0.3278 5.9955 7.7088 17 6 -0.0686 6.7633 8.8291 18 6 -0.9520 7.9398 9.1557 19 8 -0.1941 9.1470 9.0547 20 14 -2.3764 7.9985 7.9564 21 1 -3.1639 6.7439 8.0612 22 1 -3.2465 9.1582 8.2777 23 1 -1.8537 8.1408 6.5736 24 6 1.0001 6.4538 9.6500 25 6 1.8114 5.3758 9.3528 26 6 3.3926 -2.2434 3.7030 27 7 3.1580 -2.8756 2.5703 28 6 2.7191 -2.2433 1.4997 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 -1.0277 -0.0005 32 1 3.5741 1.7563 0.0005 33 1 2.1207 2.2702 -0.8900 34 1 2.1207 2.2703 0.8900 35 1 2.1207 -1.9059 -1.5211 36 1 2.1207 -0.3644 -2.4111 37 1 3.5741 -0.8787 -1.5209 38 1 2.5456 0.8888 2.7431 39 1 4.1446 -0.5110 5.5953 40 1 2.9791 0.9954 7.4690 41 1 4.0312 2.0546 6.4997 42 1 2.0696 3.4445 5.8907 43 1 1.0180 2.3850 6.8601 44 1 0.2834 4.3230 6.5268 45 1 -1.1627 6.2397 7.0688 46 1 -1.3356 7.8353 10.1705 47 1 0.1786 9.3052 8.1766 48 1 1.2008 7.0553 10.5242 49 1 2.6463 5.1347 9.9941 50 1 3.7522 -2.7956 4.5587 51 1 2.5348 -2.7981 0.5917 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16915418_4549602.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:10:42 Heat of formation + Delta-G solvation = -87.789143 kcal Electronic energy + Delta-G solvation = -30331.753301 eV Core-core repulsion = 26126.760801 eV Total energy + Delta-G solvation = -4204.992500 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 374.162 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -41.97284 -41.27721 -40.27202 -39.17729 -37.19920 -36.29099 -33.76614 -32.91219 -32.11703 -31.58766 -30.79350 -29.56185 -28.53450 -28.43551 -26.75902 -25.85913 -24.70454 -24.07241 -23.24253 -22.20324 -21.56417 -19.66288 -18.84198 -18.46812 -17.94354 -17.88638 -17.65205 -17.08642 -16.92396 -16.48637 -16.14349 -15.92043 -15.76954 -15.24333 -15.10337 -14.93230 -14.90113 -14.50068 -14.42364 -14.29311 -14.23292 -14.00374 -13.97722 -13.85968 -13.59887 -13.44228 -13.30170 -13.26911 -13.11277 -13.01919 -12.96869 -12.26298 -12.12628 -12.06117 -12.05011 -11.95114 -11.86849 -11.54342 -11.32094 -11.19764 -10.96801 -10.40434 -10.39747 -10.14283 -10.02969 -9.37603 -9.20811 -0.04822 0.27658 0.29139 0.31816 1.15814 1.29815 1.42039 1.44047 1.51046 1.58604 1.79670 1.91002 1.91060 2.27017 2.47302 2.66965 2.89062 3.27933 3.48565 3.58241 3.62068 3.66818 3.71448 3.81526 3.84902 3.91981 4.11667 4.14884 4.23474 4.26324 4.32318 4.36505 4.43588 4.53458 4.56620 4.66291 4.66857 4.69584 4.70747 4.71786 4.74500 4.75560 4.95334 5.02410 5.04068 5.13824 5.17581 5.28160 5.40775 5.49628 5.50175 5.52859 5.70743 5.74235 6.01452 6.30956 6.55413 6.76409 6.99569 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.069 2.931 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.407 4.407 6 C -0.046 4.046 7 C 0.081 3.919 8 N -0.667 5.667 9 C 0.521 3.479 10 O -0.518 6.518 11 C -0.140 4.140 12 C 0.073 3.927 13 O -0.315 6.315 14 C 0.137 3.863 15 C -0.202 4.202 16 C -0.084 4.084 17 C -0.158 4.158 18 C -0.075 4.075 19 O -0.539 6.539 20 Si 0.947 3.053 21 H -0.251 1.251 22 H -0.254 1.254 23 H -0.253 1.253 24 C -0.050 4.050 25 C -0.150 4.150 26 C 0.087 3.913 27 N -0.473 5.473 28 C 0.110 3.890 29 H 0.070 0.930 30 H 0.072 0.928 31 H 0.070 0.930 32 H 0.070 0.930 33 H 0.074 0.926 34 H 0.070 0.930 35 H 0.071 0.929 36 H 0.074 0.926 37 H 0.071 0.929 38 H 0.144 0.856 39 H 0.416 0.584 40 H 0.112 0.888 41 H 0.113 0.887 42 H 0.074 0.926 43 H 0.074 0.926 44 H 0.133 0.867 45 H 0.123 0.877 46 H 0.117 0.883 47 H 0.376 0.624 48 H 0.135 0.865 49 H 0.134 0.866 50 H 0.156 0.844 51 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.246 0.005 -0.445 2.290 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.260 2.740 3 C -0.558 4.558 4 C -0.558 4.558 5 C -0.450 4.450 6 C -0.074 4.074 7 C -0.015 4.015 8 N -0.313 5.313 9 C 0.309 3.691 10 O -0.393 6.393 11 C -0.180 4.180 12 C -0.003 4.003 13 O -0.229 6.229 14 C 0.091 3.909 15 C -0.221 4.221 16 C -0.102 4.102 17 C -0.158 4.158 18 C -0.186 4.186 19 O -0.344 6.344 20 Si 0.770 3.230 21 H -0.174 1.174 22 H -0.178 1.178 23 H -0.176 1.176 24 C -0.068 4.068 25 C -0.168 4.168 26 C -0.072 4.072 27 N -0.181 5.181 28 C -0.047 4.047 29 H 0.089 0.911 30 H 0.091 0.909 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.093 0.907 34 H 0.089 0.911 35 H 0.091 0.909 36 H 0.093 0.907 37 H 0.090 0.910 38 H 0.161 0.839 39 H 0.252 0.748 40 H 0.130 0.870 41 H 0.131 0.869 42 H 0.092 0.908 43 H 0.093 0.907 44 H 0.151 0.849 45 H 0.140 0.860 46 H 0.135 0.865 47 H 0.223 0.777 48 H 0.153 0.847 49 H 0.152 0.848 50 H 0.173 0.827 51 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 1.038 -0.654 -0.725 1.425 hybrid contribution 0.709 0.375 0.173 0.820 sum 1.747 -0.279 -0.552 1.853 Atomic orbital electron populations 1.26120 1.20245 1.04706 1.04666 0.78035 0.67001 0.66024 0.62907 1.26132 1.06351 1.18580 1.04753 1.26126 1.06522 1.08174 1.14938 1.28447 1.04712 1.00938 1.10885 1.21509 0.94666 1.00963 0.90245 1.18898 1.03168 0.92950 0.86523 1.43394 1.36253 1.30857 1.20827 1.20515 0.81854 0.80184 0.86575 1.90765 1.27249 1.67463 1.53802 1.21457 1.02242 0.97384 0.96901 1.22413 0.98657 0.92291 0.86909 1.85970 1.52441 1.39930 1.44550 1.18979 0.90081 0.87466 0.94342 1.21236 0.97636 1.01190 1.02001 1.20856 0.98560 0.94650 0.96148 1.20216 0.99361 0.99253 0.97011 1.24884 1.00530 0.83435 1.09722 1.86513 1.71764 1.39199 1.36962 0.85727 0.77641 0.81347 0.78282 1.17444 1.17787 1.17636 1.20844 0.92662 0.94751 0.98560 1.20519 1.02581 0.96538 0.97180 1.22620 0.98726 0.89199 0.96695 1.67671 1.11345 1.39696 0.99415 1.22674 0.93635 0.92005 0.96363 0.91057 0.90850 0.91080 0.91126 0.90708 0.91132 0.90937 0.90684 0.90954 0.83879 0.74756 0.86972 0.86885 0.90772 0.90744 0.84922 0.85960 0.86501 0.77689 0.84670 0.84780 0.82724 0.82611 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.44 8.65 101.05 0.87 1.31 16 2 Si 1.07 -2.43 12.39 -169.99 -2.11 -4.53 16 3 C -0.45 0.65 8.58 101.05 0.87 1.51 16 4 C -0.45 0.97 8.54 101.05 0.86 1.84 16 5 C -0.41 -0.13 4.59 -39.47 -0.18 -0.31 16 6 C -0.05 -0.06 8.01 -39.10 -0.31 -0.37 16 7 C 0.08 0.06 6.31 -83.54 -0.53 -0.47 16 8 N -0.67 1.27 5.35 -9.77 -0.05 1.22 16 9 C 0.52 -0.37 7.59 -10.99 -0.08 -0.46 16 10 O -0.52 -1.41 13.67 5.55 0.08 -1.34 16 11 C -0.14 0.43 6.07 -27.88 -0.17 0.26 16 12 C 0.07 -0.06 4.03 37.16 0.15 0.09 16 13 O -0.32 -0.25 10.14 -19.43 -0.20 -0.45 16 14 C 0.14 0.19 6.69 -39.21 -0.26 -0.07 16 15 C -0.20 -0.21 9.04 -39.43 -0.36 -0.56 16 16 C -0.08 -0.07 8.66 -39.60 -0.34 -0.41 16 17 C -0.16 -0.09 5.35 -104.60 -0.56 -0.65 16 18 C -0.07 0.03 2.80 36.00 0.10 0.13 16 19 O -0.54 -0.19 12.83 -35.23 -0.45 -0.64 16 20 Si 0.95 -0.33 25.13 -169.99 -4.27 -4.61 16 21 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 22 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 23 H -0.25 0.05 7.04 56.52 0.40 0.45 16 24 C -0.05 -0.03 9.68 -39.60 -0.38 -0.41 16 25 C -0.15 -0.13 9.99 -39.43 -0.39 -0.53 16 26 C 0.09 0.09 11.12 -17.33 -0.19 -0.10 16 27 N -0.47 -1.32 10.35 -13.09 -0.14 -1.45 16 28 C 0.11 0.13 10.46 -17.53 -0.18 -0.05 16 29 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 30 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 31 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 32 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 33 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 34 H 0.07 -0.06 7.78 -51.93 -0.40 -0.47 16 35 H 0.07 -0.18 7.71 -51.93 -0.40 -0.58 16 36 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 37 H 0.07 -0.14 7.96 -51.92 -0.41 -0.56 16 38 H 0.14 0.19 6.04 -52.48 -0.32 -0.13 16 39 H 0.42 -2.20 8.82 -40.82 -0.36 -2.56 16 40 H 0.11 -0.52 8.14 -51.93 -0.42 -0.94 16 41 H 0.11 -0.52 8.14 -51.93 -0.42 -0.95 16 42 H 0.07 -0.05 7.61 -51.92 -0.39 -0.45 16 43 H 0.07 -0.03 7.63 -51.93 -0.40 -0.43 16 44 H 0.13 -0.01 6.30 -52.49 -0.33 -0.34 16 45 H 0.12 -0.05 4.86 -52.49 -0.25 -0.30 16 46 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 47 H 0.38 -1.03 8.70 45.56 0.40 -0.63 16 48 H 0.14 -0.09 8.06 -52.49 -0.42 -0.51 16 49 H 0.13 -0.05 8.06 -52.49 -0.42 -0.48 16 50 H 0.16 -0.25 8.06 -52.48 -0.42 -0.67 16 51 H 0.16 -0.18 7.46 -52.49 -0.39 -0.57 16 LS Contribution 424.35 15.07 6.39 6.39 Total: 0.00 -9.02 424.35 -8.91 -17.94 By element: Atomic # 1 Polarization: -6.21 SS G_CDS: -7.08 Total: -13.28 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: -1.09 Total: 0.75 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -0.19 Total: -0.24 kcal Atomic # 8 Polarization: -1.85 SS G_CDS: -0.57 Total: -2.42 kcal Atomic # 14 Polarization: -2.76 SS G_CDS: -6.38 Total: -9.14 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -9.02 -8.91 -17.94 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16915418_4549602.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.854 kcal (2) G-P(sol) polarization free energy of solvation -9.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.877 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.913 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.935 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds