Wall clock time and date at job start Sun Mar 7 2021 12:16:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86305 * 1 3 3 C 1.86299 * 109.47128 * 2 1 4 4 C 1.86296 * 109.47230 * 239.99861 * 2 1 3 5 5 C 1.86799 * 109.46918 * 119.99795 * 2 1 3 6 6 C 1.38510 * 120.38606 * 270.27247 * 5 2 1 7 7 C 1.39281 * 118.35932 * 180.26613 * 6 5 2 8 8 N 1.39948 * 120.48551 * 179.76415 * 7 6 5 9 9 C 1.34781 * 120.00201 * 327.16397 * 8 7 6 10 10 O 1.21291 * 119.99571 * 354.73516 * 9 8 7 11 11 C 1.50698 * 120.00457 * 174.73943 * 9 8 7 12 12 O 1.42898 * 109.47162 * 179.97438 * 11 9 8 13 13 C 1.35901 * 116.99536 * 179.97438 * 12 11 9 14 14 C 1.38704 * 120.05784 * 359.71881 * 13 12 11 15 15 C 1.38174 * 119.94279 * 179.74964 * 14 13 12 16 16 C 1.38245 * 120.05121 * 0.52671 * 15 14 13 17 17 C 1.50712 * 119.94047 * 179.72235 * 16 15 14 18 18 O 1.42888 * 109.47154 * 245.02561 * 17 16 15 19 19 Si 1.86302 * 109.46928 * 5.02863 * 17 16 15 20 20 H 1.48495 * 109.47245 * 59.99661 * 19 17 16 21 21 H 1.48501 * 109.46728 * 179.97438 * 19 17 16 22 22 H 1.48498 * 109.46849 * 299.99467 * 19 17 16 23 23 C 1.38281 * 120.11680 * 359.75115 * 16 15 14 24 24 C 1.38123 * 120.05391 * 359.97252 * 23 16 15 25 25 N 1.48002 * 120.02754 * 180.02562 * 24 23 16 26 26 O 1.21797 * 120.00363 * 359.97438 * 25 24 23 27 27 O 1.21811 * 120.00007 * 179.97438 * 25 24 23 28 28 C 1.38843 * 119.02516 * 359.48838 * 7 6 5 29 29 N 1.31819 * 120.66360 * 0.25166 * 28 7 6 30 30 C 1.31850 * 121.79924 * 359.97438 * 29 28 7 31 31 H 1.09009 * 109.46955 * 300.00009 * 1 2 3 32 32 H 1.08998 * 109.46858 * 59.99779 * 1 2 3 33 33 H 1.08994 * 109.47143 * 180.02562 * 1 2 3 34 34 H 1.08998 * 109.47216 * 179.97438 * 3 2 1 35 35 H 1.09001 * 109.47291 * 300.00371 * 3 2 1 36 36 H 1.09002 * 109.47417 * 59.99819 * 3 2 1 37 37 H 1.09004 * 109.47108 * 300.00711 * 4 2 1 38 38 H 1.09011 * 109.46792 * 60.00035 * 4 2 1 39 39 H 1.08998 * 109.47314 * 179.97438 * 4 2 1 40 40 H 1.08000 * 120.81536 * 0.02562 * 6 5 2 41 41 H 0.96995 * 120.00392 * 147.43292 * 8 7 6 42 42 H 1.09006 * 109.46788 * 299.99520 * 11 9 8 43 43 H 1.08997 * 109.47039 * 59.99441 * 11 9 8 44 44 H 1.07994 * 120.03420 * 0.02737 * 14 13 12 45 45 H 1.07997 * 119.97352 * 180.27733 * 15 14 13 46 46 H 1.09000 * 109.46466 * 125.02307 * 17 16 15 47 47 H 0.96702 * 114.00300 * 60.00074 * 18 17 16 48 48 H 1.07997 * 119.97423 * 179.97438 * 23 16 15 49 49 H 1.07998 * 119.66543 * 180.23404 * 28 7 6 50 50 H 1.07999 * 119.54515 * 179.97438 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4841 -0.8782 -1.5211 5 6 2.4857 -0.8805 1.5253 6 6 2.7138 -0.1770 2.6963 7 6 3.1833 -0.8747 3.8066 8 7 3.4336 -0.2073 5.0109 9 6 3.8696 1.0680 4.9967 10 8 4.1363 1.6059 3.9428 11 6 4.0259 1.8254 6.2900 12 8 4.4985 3.1456 6.0148 13 6 4.6936 3.9658 7.0807 14 6 4.4300 3.5113 8.3644 15 6 4.6341 4.3454 9.4469 16 6 5.0902 5.6355 9.2503 17 6 5.3060 6.5453 10.4324 18 8 4.3915 7.6410 10.3633 19 14 5.0183 5.5945 12.0084 20 1 5.9687 4.4558 12.0801 21 1 5.2315 6.4908 13.1731 22 1 3.6258 5.0791 12.0283 23 6 5.3483 6.0930 7.9711 24 6 5.1513 5.2612 6.8862 25 7 5.4282 5.7511 5.5174 26 8 5.8295 6.8884 5.3471 27 8 5.2547 5.0170 4.5610 28 6 3.3939 -2.2432 3.7026 29 7 3.1588 -2.8754 2.5701 30 6 2.7184 -2.2434 1.5000 31 1 -0.3633 0.5139 0.8901 32 1 -0.3633 0.5139 -0.8900 33 1 -0.3633 -1.0276 0.0005 34 1 3.5740 1.7565 0.0005 35 1 2.1207 2.2703 -0.8900 36 1 2.1207 2.2703 0.8900 37 1 2.1206 -1.9059 -1.5211 38 1 2.1207 -0.3643 -2.4111 39 1 3.5740 -0.8778 -1.5213 40 1 2.5358 0.8871 2.7461 41 1 3.2971 -0.6637 5.8558 42 1 3.0623 1.8823 6.7964 43 1 4.7423 1.3093 6.9291 44 1 4.0698 2.5048 8.5181 45 1 4.4333 3.9905 10.4469 46 1 6.3282 6.9236 10.4177 47 1 3.4610 7.3779 10.3719 48 1 5.7042 7.1014 7.8203 49 1 3.7541 -2.7951 4.5581 50 1 2.5383 -2.7975 0.5906 RHF calculation, no. of doubly occupied orbitals= 72 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16915418_4549638.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:16:42 Heat of formation + Delta-G solvation = -69.166886 kcal Electronic energy + Delta-G solvation = -35424.148307 eV Core-core repulsion = 30544.484513 eV Total energy + Delta-G solvation = -4879.663795 eV No. of doubly occupied orbitals = 72 Molecular weight (most abundant/longest-lived isotopes) = 405.141 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -43.09451 -42.11063 -41.52934 -40.36486 -39.50053 -37.61734 -37.18841 -36.28009 -33.62748 -33.05607 -32.49782 -31.68434 -29.68956 -29.46245 -28.41673 -28.35408 -27.66472 -26.80986 -24.98291 -24.40742 -23.70710 -22.86781 -21.83224 -20.56660 -19.56393 -19.52520 -19.08498 -18.48130 -18.41991 -18.17121 -17.86661 -17.76374 -17.38524 -16.87750 -16.61879 -16.38375 -15.97068 -15.72273 -15.67990 -15.42492 -14.96058 -14.86058 -14.36196 -14.20284 -14.18926 -14.12437 -14.00206 -13.89714 -13.78898 -13.42108 -13.39242 -13.23537 -13.16751 -13.02857 -12.72352 -12.60294 -12.42000 -12.25673 -12.06213 -12.02507 -11.94010 -11.86994 -11.79106 -11.28019 -11.15143 -11.00140 -10.87233 -10.79510 -10.37856 -10.12797 -10.00511 -9.39390 -1.20468 -0.45839 -0.05240 0.27966 0.31529 0.45383 0.82322 0.89506 1.12366 1.20573 1.21866 1.62200 1.64568 1.85558 1.85686 1.96312 1.99480 2.53694 2.86688 2.90559 2.91875 3.11910 3.15539 3.24591 3.39371 3.45337 3.46308 3.59312 3.62572 3.84429 4.06027 4.10278 4.15253 4.24636 4.29227 4.31224 4.35076 4.59716 4.71991 4.72674 4.76466 4.76848 4.85251 4.86409 4.87897 4.99798 5.02329 5.16763 5.32754 5.46893 5.54703 5.61918 5.67804 5.74772 5.94543 6.25317 6.71902 6.87692 6.99445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.448 4.448 2 Si 1.067 2.933 3 C -0.449 4.449 4 C -0.449 4.449 5 C -0.405 4.405 6 C -0.045 4.045 7 C 0.082 3.918 8 N -0.666 5.666 9 C 0.512 3.488 10 O -0.474 6.474 11 C 0.033 3.967 12 O -0.254 6.254 13 C 0.199 3.801 14 C -0.208 4.208 15 C -0.033 4.033 16 C -0.156 4.156 17 C -0.079 4.079 18 O -0.533 6.533 19 Si 0.947 3.053 20 H -0.247 1.247 21 H -0.245 1.245 22 H -0.249 1.249 23 C 0.013 3.987 24 C -0.074 4.074 25 N 0.028 4.972 26 O -0.174 6.174 27 O -0.120 6.120 28 C 0.089 3.911 29 N -0.473 5.473 30 C 0.112 3.888 31 H 0.068 0.932 32 H 0.073 0.927 33 H 0.070 0.930 34 H 0.073 0.927 35 H 0.072 0.928 36 H 0.069 0.931 37 H 0.071 0.929 38 H 0.074 0.926 39 H 0.072 0.928 40 H 0.145 0.855 41 H 0.414 0.586 42 H 0.107 0.893 43 H 0.106 0.894 44 H 0.156 0.844 45 H 0.144 0.856 46 H 0.126 0.874 47 H 0.378 0.622 48 H 0.167 0.833 49 H 0.155 0.845 50 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.593 -3.840 7.877 9.471 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.556 4.556 2 Si 1.258 2.742 3 C -0.557 4.557 4 C -0.557 4.557 5 C -0.448 4.448 6 C -0.073 4.073 7 C -0.014 4.014 8 N -0.314 5.314 9 C 0.297 3.703 10 O -0.344 6.344 11 C -0.045 4.045 12 O -0.163 6.163 13 C 0.150 3.850 14 C -0.227 4.227 15 C -0.051 4.051 16 C -0.158 4.158 17 C -0.189 4.189 18 O -0.338 6.338 19 Si 0.769 3.231 20 H -0.170 1.170 21 H -0.168 1.168 22 H -0.172 1.172 23 C -0.006 4.006 24 C -0.158 4.158 25 N 0.549 4.451 26 O -0.383 6.383 27 O -0.343 6.343 28 C -0.071 4.071 29 N -0.181 5.181 30 C -0.045 4.045 31 H 0.087 0.913 32 H 0.093 0.907 33 H 0.089 0.911 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.093 0.907 39 H 0.091 0.909 40 H 0.163 0.837 41 H 0.250 0.750 42 H 0.125 0.875 43 H 0.124 0.876 44 H 0.173 0.827 45 H 0.161 0.839 46 H 0.144 0.856 47 H 0.226 0.774 48 H 0.184 0.816 49 H 0.173 0.827 50 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -2.892 -4.582 8.370 9.971 hybrid contribution -0.453 0.408 0.204 0.642 sum -3.345 -4.175 8.574 10.106 Atomic orbital electron populations 1.26114 1.20231 1.04613 1.04631 0.78081 0.66779 0.66312 0.62980 1.26127 1.06835 1.18153 1.04608 1.26115 1.06644 1.08027 1.14934 1.28472 1.04799 1.00675 1.10837 1.21550 0.93110 1.01120 0.91495 1.18824 1.01625 0.93392 0.87560 1.43145 1.66976 1.12996 1.08322 1.19999 0.77781 0.81772 0.90775 1.90886 1.44866 1.66939 1.31719 1.22649 1.02400 0.82754 0.96713 1.86488 1.78899 1.22304 1.28616 1.18654 0.90809 0.88010 0.87576 1.21245 1.08748 1.02749 0.90007 1.21321 0.91772 0.92437 0.99567 1.20305 1.04566 0.95637 0.95248 1.25027 0.98228 0.93118 1.02523 1.86582 1.19301 1.31102 1.96841 0.85713 0.81482 0.79110 0.76809 1.17017 1.16814 1.17235 1.20862 0.90813 0.99899 0.89059 1.20602 1.17073 0.93935 0.84225 1.43331 0.98623 1.00691 1.02495 1.94562 1.48161 1.04038 1.91537 1.94696 1.54061 1.54000 1.31524 1.22588 0.97887 0.89970 0.96680 1.67673 1.11390 1.39759 0.99312 1.22692 0.93742 0.91884 0.96192 0.91261 0.90745 0.91087 0.90817 0.90881 0.91136 0.91015 0.90656 0.90887 0.83740 0.74970 0.87544 0.87642 0.82651 0.83893 0.85644 0.77437 0.81559 0.82746 0.82541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.58 8.65 101.05 0.87 1.46 16 2 Si 1.07 -1.83 12.38 -169.99 -2.11 -3.94 16 3 C -0.45 -0.14 8.59 101.05 0.87 0.73 16 4 C -0.45 0.66 8.54 101.05 0.86 1.52 16 5 C -0.41 -0.24 4.59 -39.47 -0.18 -0.42 16 6 C -0.05 -0.07 8.01 -39.09 -0.31 -0.39 16 7 C 0.08 0.04 6.31 -83.54 -0.53 -0.48 16 8 N -0.67 1.66 5.35 -9.77 -0.05 1.60 16 9 C 0.51 -0.15 7.67 -10.98 -0.08 -0.24 16 10 O -0.47 -2.24 14.20 -14.36 -0.20 -2.44 16 11 C 0.03 -0.12 5.22 36.00 0.19 0.07 16 12 O -0.25 -0.29 7.68 -49.78 -0.38 -0.67 16 13 C 0.20 -0.01 6.67 -39.22 -0.26 -0.27 16 14 C -0.21 0.78 9.04 -39.43 -0.36 0.43 16 15 C -0.03 0.13 8.66 -39.60 -0.34 -0.21 16 16 C -0.16 0.40 5.35 -104.60 -0.56 -0.16 16 17 C -0.08 0.27 2.80 36.01 0.10 0.37 16 18 O -0.53 1.15 12.83 -35.23 -0.45 0.70 16 19 Si 0.95 -3.66 25.13 -169.99 -4.27 -7.93 16 20 H -0.25 0.88 7.11 56.52 0.40 1.28 16 21 H -0.24 0.44 7.11 56.52 0.40 0.84 16 22 H -0.25 1.05 7.04 56.52 0.40 1.45 16 23 C 0.01 0.00 9.19 -39.61 -0.36 -0.37 16 24 C -0.07 -0.15 6.87 -79.81 -0.55 -0.70 16 25 N 0.03 0.16 4.45 34.03 0.15 0.31 16 26 O -0.17 -1.13 18.45 -29.46 -0.54 -1.67 16 27 O -0.12 -0.92 17.24 -36.49 -0.63 -1.55 16 28 C 0.09 0.06 11.12 -17.33 -0.19 -0.13 16 29 N -0.47 -1.23 10.35 -13.09 -0.14 -1.37 16 30 C 0.11 0.14 10.46 -17.53 -0.18 -0.05 16 31 H 0.07 -0.07 7.96 -51.92 -0.41 -0.48 16 32 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 33 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 34 H 0.07 0.10 7.96 -51.93 -0.41 -0.31 16 35 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 36 H 0.07 0.07 7.78 -51.93 -0.40 -0.34 16 37 H 0.07 -0.15 7.71 -51.93 -0.40 -0.55 16 38 H 0.07 -0.12 7.96 -51.92 -0.41 -0.54 16 39 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 40 H 0.14 0.29 6.07 -52.49 -0.32 -0.02 16 41 H 0.41 -2.76 8.82 -40.82 -0.36 -3.12 16 42 H 0.11 -0.74 7.65 -51.93 -0.40 -1.14 16 43 H 0.11 -0.73 7.68 -51.93 -0.40 -1.13 16 44 H 0.16 -1.15 6.30 -52.49 -0.33 -1.48 16 45 H 0.14 -0.87 4.86 -52.49 -0.25 -1.12 16 46 H 0.13 -0.51 7.96 -51.93 -0.41 -0.92 16 47 H 0.38 -2.08 8.70 45.56 0.40 -1.69 16 48 H 0.17 -0.08 7.61 -52.49 -0.40 -0.48 16 49 H 0.16 -0.34 8.06 -52.49 -0.42 -0.77 16 50 H 0.16 -0.17 7.45 -52.49 -0.39 -0.57 16 LS Contribution 429.46 15.07 6.47 6.47 Total: 0.00 -13.40 429.46 -8.96 -22.36 By element: Atomic # 1 Polarization: -7.26 SS G_CDS: -5.79 Total: -13.04 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: -1.02 Total: 1.17 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.04 Total: 0.55 kcal Atomic # 8 Polarization: -3.43 SS G_CDS: -2.21 Total: -5.64 kcal Atomic # 14 Polarization: -5.49 SS G_CDS: -6.38 Total: -11.86 kcal Total LS contribution 6.47 Total: 6.47 kcal Total: -13.40 -8.96 -22.36 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16915418_4549638.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.802 kcal (2) G-P(sol) polarization free energy of solvation -13.403 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.205 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.962 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.365 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.167 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds