Wall clock time and date at job start Sun Mar 7 2021 12:17:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35984 * 117.00189 * 2 1 4 4 C 1.38672 * 119.99575 * 0.03191 * 3 2 1 5 5 C 1.38158 * 119.99570 * 179.74529 * 4 3 2 6 6 C 1.38678 * 119.99834 * 0.49624 * 5 4 3 7 7 O 1.35984 * 119.99972 * 179.74529 * 6 5 4 8 8 C 1.42903 * 117.00059 * 359.73508 * 7 6 5 9 9 C 1.50693 * 109.47471 * 179.97438 * 8 7 6 10 10 O 1.21289 * 119.99710 * 359.97438 * 9 8 7 11 11 N 1.34773 * 120.00351 * 179.97438 * 9 8 7 12 12 C 1.39949 * 119.99944 * 185.26496 * 11 9 8 13 13 C 1.39243 * 120.49362 * 32.68450 * 12 11 9 14 14 C 1.38539 * 118.36129 * 179.97438 * 13 12 11 15 15 Si 1.86803 * 120.37766 * 180.02562 * 14 13 12 16 16 C 1.86296 * 109.47314 * 269.95292 * 15 14 13 17 17 C 1.86297 * 109.47354 * 29.95578 * 15 14 13 18 18 C 1.86300 * 109.47050 * 149.95502 * 15 14 13 19 19 C 1.38224 * 119.24008 * 359.97438 * 14 13 12 20 20 N 1.31878 * 120.91977 * 0.02562 * 19 14 13 21 21 C 1.31788 * 121.79905 * 0.02562 * 20 19 14 22 22 C 1.38718 * 120.00183 * 359.47826 * 6 5 4 23 23 C 1.50693 * 120.00364 * 180.29154 * 22 6 5 24 24 O 1.42899 * 109.47476 * 285.00532 * 23 22 6 25 25 Si 1.86302 * 109.47495 * 164.99712 * 23 22 6 26 26 H 1.48508 * 109.46475 * 60.00360 * 25 23 22 27 27 H 1.48498 * 109.47258 * 180.02562 * 25 23 22 28 28 H 1.48498 * 109.47281 * 300.00807 * 25 23 22 29 29 C 1.38111 * 119.99881 * 0.27345 * 22 6 5 30 30 H 1.08996 * 109.47264 * 299.99369 * 1 2 3 31 31 H 1.09004 * 109.47397 * 59.99489 * 1 2 3 32 32 H 1.09004 * 109.47131 * 179.97438 * 1 2 3 33 33 H 1.07997 * 120.00160 * 0.02562 * 4 3 2 34 34 H 1.08001 * 119.99998 * 180.24934 * 5 4 3 35 35 H 1.08997 * 109.47418 * 59.99257 * 8 7 6 36 36 H 1.09005 * 109.46636 * 299.99764 * 8 7 6 37 37 H 0.96997 * 119.99541 * 5.26196 * 11 9 8 38 38 H 1.08004 * 120.81278 * 359.97438 * 13 12 11 39 39 H 1.09005 * 109.47078 * 59.99939 * 16 15 14 40 40 H 1.08999 * 109.47373 * 180.02562 * 16 15 14 41 41 H 1.09004 * 109.47078 * 300.00431 * 16 15 14 42 42 H 1.09006 * 109.47332 * 59.99555 * 17 15 14 43 43 H 1.08996 * 109.47734 * 179.97438 * 17 15 14 44 44 H 1.09002 * 109.47247 * 299.99896 * 17 15 14 45 45 H 1.08996 * 109.47311 * 59.99764 * 18 15 14 46 46 H 1.09004 * 109.47343 * 180.02562 * 18 15 14 47 47 H 1.09000 * 109.47151 * 299.99734 * 18 15 14 48 48 H 1.08008 * 119.53699 * 180.30249 * 19 14 13 49 49 H 1.08004 * 119.66854 * 179.97438 * 21 20 19 50 50 H 1.09006 * 109.46863 * 44.99895 * 23 22 6 51 51 H 0.96700 * 114.00019 * 59.99010 * 24 23 22 52 52 H 1.08000 * 120.00393 * 179.97438 * 29 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 1.2911 2.3746 0.0007 5 6 1.9183 3.6055 0.0060 6 6 3.3032 3.6781 0.0003 7 8 3.9206 4.8897 0.0003 8 6 3.0807 6.0458 0.0004 9 6 3.9348 7.2873 0.0011 10 8 5.1439 7.1915 0.0018 11 7 3.3553 8.5041 0.0008 12 6 4.1440 9.6548 -0.1099 13 6 5.3190 9.6369 -0.8568 14 6 6.0656 10.8011 -0.9371 15 14 7.6509 10.8406 -1.9244 16 6 9.0800 10.3752 -0.8236 17 6 7.5340 9.6298 -3.3355 18 6 7.9198 12.5562 -2.5990 19 6 5.6236 11.9334 -0.2790 20 7 4.5058 11.9177 0.4206 21 6 3.7664 10.8316 0.5237 22 6 4.0587 2.5147 0.0001 23 6 5.5636 2.5935 0.0005 24 8 6.0215 2.9671 -1.3005 25 14 6.2724 0.9316 0.4549 26 1 5.8301 -0.0827 -0.5356 27 1 7.7554 1.0094 0.4559 28 1 5.7966 0.5434 1.8070 29 6 3.4317 1.2841 0.0000 30 1 -0.3633 0.5137 0.8900 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 0.2126 2.3180 0.0016 34 1 1.3301 4.5113 0.0106 35 1 2.4514 6.0377 0.8904 36 1 2.4513 6.0378 -0.8895 37 1 2.3915 8.5822 0.0773 38 1 5.6403 8.7375 -1.3612 39 1 8.9226 9.3713 -0.4288 40 1 10.0050 10.3986 -1.3996 41 1 9.1484 11.0836 0.0020 42 1 6.6979 9.9021 -3.9796 43 1 8.4588 9.6531 -3.9119 44 1 7.3767 8.6260 -2.9408 45 1 7.9882 13.2646 -1.7735 46 1 8.8446 12.5791 -3.1755 47 1 7.0838 12.8285 -3.2431 48 1 6.1993 12.8451 -0.3423 49 1 2.8572 10.8572 1.1062 50 1 5.8882 3.3380 0.7275 51 1 5.6909 3.8241 -1.6028 52 1 4.0198 0.3783 -0.0005 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16915418_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:17:42 Heat of formation + Delta-G solvation = -112.750529 kcal Electronic energy + Delta-G solvation = -33628.889402 eV Core-core repulsion = 29104.132303 eV Total energy + Delta-G solvation = -4524.757099 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 390.162 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.11190 -41.61861 -40.47109 -39.77151 -38.10331 -36.90276 -36.25128 -33.08692 -32.84490 -31.85391 -30.82409 -29.53671 -29.29546 -28.44986 -28.38970 -28.11256 -26.54662 -24.94638 -24.30608 -23.43294 -22.45764 -21.72226 -19.64657 -19.29302 -18.90208 -18.18169 -18.00057 -17.79667 -17.69017 -17.50314 -16.92403 -16.70222 -16.21661 -15.90110 -15.70697 -15.58260 -15.34262 -15.03625 -14.86770 -14.80532 -14.31281 -14.23472 -14.17320 -14.03377 -13.94427 -13.83371 -13.72903 -13.55508 -13.41504 -13.26210 -13.23464 -13.14983 -13.06691 -12.76102 -12.35304 -12.11915 -12.05550 -11.91307 -11.66623 -11.58149 -11.28675 -11.18536 -11.09167 -10.93700 -10.92874 -10.38283 -10.13756 -10.11959 -9.38929 -8.87632 -0.05173 0.02624 0.27741 0.29799 1.15001 1.25909 1.30661 1.60513 1.61813 1.66928 1.83229 1.94344 2.08274 2.20760 2.33419 2.50911 2.51390 2.88830 3.17320 3.47852 3.57845 3.59301 3.62779 3.67972 3.84369 3.91470 4.03645 4.05742 4.07034 4.13927 4.14535 4.24957 4.28841 4.31962 4.42507 4.50189 4.59982 4.69771 4.70380 4.74273 4.74863 4.79166 4.80792 4.98397 5.01004 5.02214 5.06184 5.14091 5.15137 5.34813 5.44638 5.54009 5.57955 5.73737 5.91782 6.07146 6.33407 6.70267 6.74327 6.99380 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.106 3.894 4 C -0.165 4.165 5 C -0.164 4.164 6 C 0.101 3.899 7 O -0.289 6.289 8 C 0.043 3.957 9 C 0.516 3.484 10 O -0.490 6.490 11 N -0.666 5.666 12 C 0.082 3.918 13 C -0.045 4.045 14 C -0.406 4.406 15 Si 1.070 2.930 16 C -0.450 4.450 17 C -0.451 4.451 18 C -0.450 4.450 19 C 0.111 3.889 20 N -0.473 5.473 21 C 0.089 3.911 22 C -0.096 4.096 23 C -0.085 4.085 24 O -0.535 6.535 25 Si 1.013 2.987 26 H -0.250 1.250 27 H -0.254 1.254 28 H -0.248 1.248 29 C -0.116 4.116 30 H 0.056 0.944 31 H 0.056 0.944 32 H 0.103 0.897 33 H 0.136 0.864 34 H 0.134 0.866 35 H 0.098 0.902 36 H 0.100 0.900 37 H 0.415 0.585 38 H 0.145 0.855 39 H 0.071 0.929 40 H 0.073 0.927 41 H 0.070 0.930 42 H 0.069 0.931 43 H 0.074 0.926 44 H 0.071 0.929 45 H 0.071 0.929 46 H 0.074 0.926 47 H 0.071 0.929 48 H 0.157 0.843 49 H 0.156 0.844 50 H 0.082 0.918 51 H 0.370 0.630 52 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.808 0.919 -0.679 5.919 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.060 3.940 4 C -0.184 4.184 5 C -0.183 4.183 6 C 0.056 3.944 7 O -0.202 6.202 8 C -0.035 4.035 9 C 0.301 3.699 10 O -0.362 6.362 11 N -0.314 5.314 12 C -0.014 4.014 13 C -0.073 4.073 14 C -0.449 4.449 15 Si 1.261 2.739 16 C -0.558 4.558 17 C -0.558 4.558 18 C -0.558 4.558 19 C -0.046 4.046 20 N -0.181 5.181 21 C -0.071 4.071 22 C -0.097 4.097 23 C -0.193 4.193 24 O -0.340 6.340 25 Si 0.833 3.167 26 H -0.174 1.174 27 H -0.178 1.178 28 H -0.171 1.171 29 C -0.134 4.134 30 H 0.075 0.925 31 H 0.075 0.925 32 H 0.121 0.879 33 H 0.153 0.847 34 H 0.152 0.848 35 H 0.116 0.884 36 H 0.117 0.883 37 H 0.251 0.749 38 H 0.162 0.838 39 H 0.090 0.910 40 H 0.092 0.908 41 H 0.089 0.911 42 H 0.088 0.912 43 H 0.093 0.907 44 H 0.090 0.910 45 H 0.090 0.910 46 H 0.093 0.907 47 H 0.090 0.910 48 H 0.174 0.826 49 H 0.173 0.827 50 H 0.100 0.900 51 H 0.218 0.782 52 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -4.343 0.019 0.042 4.344 hybrid contribution -1.814 0.593 -0.361 1.942 sum -6.157 0.612 -0.319 6.196 Atomic orbital electron populations 1.23109 0.77991 1.04429 1.01364 1.86117 1.21620 1.26274 1.88845 1.18810 0.91897 0.84589 0.98669 1.21083 1.00357 0.91487 1.05444 1.21017 0.92801 0.98686 1.05797 1.18588 0.90763 0.84346 1.00687 1.86098 1.33695 1.10993 1.89409 1.22381 0.92912 0.83747 1.04509 1.20217 0.89052 0.83971 0.76631 1.90802 1.13971 1.86199 1.45233 1.43191 1.10807 1.03825 1.73582 1.18847 0.95260 0.87584 0.99711 1.21535 0.92734 0.98970 0.94083 1.28460 1.14135 0.94815 1.07466 0.78033 0.62768 0.67441 0.65685 1.26122 1.13633 1.05868 1.10157 1.26134 1.04793 1.11350 1.13571 1.26128 1.05170 1.17669 1.06794 1.22678 0.91882 0.97996 0.92025 1.67672 1.06070 1.27742 1.16637 1.22610 0.99959 0.87742 0.96814 1.19425 0.96707 0.89892 1.03722 1.25242 0.91341 1.13470 0.89218 1.86680 1.73714 1.42044 1.31587 0.84490 0.79758 0.72812 0.79679 1.17424 1.17825 1.17108 1.20239 0.92039 0.97414 1.03749 0.92520 0.92525 0.87869 0.84652 0.84837 0.88427 0.88273 0.74899 0.83770 0.90964 0.90828 0.91120 0.91177 0.90694 0.91000 0.90956 0.90669 0.90982 0.82571 0.82726 0.90018 0.78174 0.84034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.52 10.50 -19.69 -0.21 -0.73 16 3 C 0.11 0.18 6.69 -39.24 -0.26 -0.08 16 4 C -0.16 0.05 9.03 -39.45 -0.36 -0.30 16 5 C -0.16 0.15 9.03 -39.45 -0.36 -0.20 16 6 C 0.10 0.09 6.62 -39.24 -0.26 -0.17 16 7 O -0.29 -0.19 8.56 -39.60 -0.34 -0.53 16 8 C 0.04 -0.12 5.22 36.00 0.19 0.06 16 9 C 0.52 -0.18 7.67 -10.99 -0.08 -0.27 16 10 O -0.49 -1.88 14.19 -14.36 -0.20 -2.09 16 11 N -0.67 1.48 5.35 -9.77 -0.05 1.43 16 12 C 0.08 0.05 6.31 -83.54 -0.53 -0.48 16 13 C -0.05 -0.06 8.01 -39.10 -0.31 -0.38 16 14 C -0.41 -0.15 4.59 -39.48 -0.18 -0.33 16 15 Si 1.07 -2.20 12.39 -169.99 -2.11 -4.30 16 16 C -0.45 0.28 8.65 101.05 0.87 1.15 16 17 C -0.45 0.50 8.58 101.05 0.87 1.36 16 18 C -0.45 0.92 8.54 101.05 0.86 1.78 16 19 C 0.11 0.13 10.45 -17.54 -0.18 -0.06 16 20 N -0.47 -1.24 10.35 -13.09 -0.14 -1.37 16 21 C 0.09 0.07 11.12 -17.33 -0.19 -0.12 16 22 C -0.10 -0.20 5.28 -104.49 -0.55 -0.75 16 23 C -0.08 -0.18 2.33 36.00 0.08 -0.10 16 24 O -0.53 -1.65 12.65 -35.23 -0.45 -2.09 16 25 Si 1.01 1.75 25.75 -169.99 -4.38 -2.63 16 26 H -0.25 -0.56 6.73 56.52 0.38 -0.17 16 27 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 28 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 29 C -0.12 -0.26 8.59 -39.45 -0.34 -0.60 16 30 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 31 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 32 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 33 H 0.14 -0.36 6.29 -52.49 -0.33 -0.69 16 34 H 0.13 -0.54 6.29 -52.49 -0.33 -0.87 16 35 H 0.10 -0.51 7.65 -51.93 -0.40 -0.91 16 36 H 0.10 -0.54 7.67 -51.93 -0.40 -0.94 16 37 H 0.41 -2.51 8.82 -40.82 -0.36 -2.87 16 38 H 0.14 0.23 6.04 -52.48 -0.32 -0.09 16 39 H 0.07 0.03 7.96 -51.93 -0.41 -0.38 16 40 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 41 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 42 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 43 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 44 H 0.07 -0.03 7.78 -51.93 -0.40 -0.43 16 45 H 0.07 -0.17 7.71 -51.93 -0.40 -0.57 16 46 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 47 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 48 H 0.16 -0.19 7.45 -52.48 -0.39 -0.58 16 49 H 0.16 -0.31 8.06 -52.48 -0.42 -0.74 16 50 H 0.08 0.14 7.82 -51.93 -0.41 -0.26 16 51 H 0.37 0.48 8.60 45.56 0.39 0.87 16 52 H 0.14 0.25 4.89 -52.49 -0.26 0.00 16 LS Contribution 431.48 15.07 6.50 6.50 Total: 0.00 -10.16 431.48 -8.05 -18.21 By element: Atomic # 1 Polarization: -6.90 SS G_CDS: -6.95 Total: -13.85 kcal Atomic # 6 Polarization: 1.19 SS G_CDS: 0.26 Total: 1.45 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -0.19 Total: 0.06 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -1.20 Total: -5.44 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -6.48 Total: -6.93 kcal Total LS contribution 6.50 Total: 6.50 kcal Total: -10.16 -8.05 -18.21 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16915418_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.540 kcal (2) G-P(sol) polarization free energy of solvation -10.156 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.697 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.210 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds