Wall clock time and date at job start Sun Mar 7 2021 12:17:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35984 * 117.00189 * 2 1 4 4 C 1.38672 * 119.99575 * 0.03191 * 3 2 1 5 5 C 1.38158 * 119.99570 * 179.74529 * 4 3 2 6 6 C 1.38678 * 119.99834 * 0.49624 * 5 4 3 7 7 O 1.35984 * 119.99972 * 179.74529 * 6 5 4 8 8 C 1.42903 * 117.00059 * 359.73508 * 7 6 5 9 9 C 1.50693 * 109.47471 * 179.97438 * 8 7 6 10 10 O 1.21289 * 119.99710 * 359.97438 * 9 8 7 11 11 N 1.34773 * 120.00351 * 179.97438 * 9 8 7 12 12 C 1.39949 * 119.99944 * 185.26496 * 11 9 8 13 13 C 1.39243 * 120.49362 * 32.68450 * 12 11 9 14 14 C 1.38539 * 118.36129 * 179.97438 * 13 12 11 15 15 Si 1.86803 * 120.37766 * 180.02562 * 14 13 12 16 16 C 1.86296 * 109.47314 * 269.95292 * 15 14 13 17 17 C 1.86297 * 109.47354 * 29.95578 * 15 14 13 18 18 C 1.86300 * 109.47050 * 149.95502 * 15 14 13 19 19 C 1.38224 * 119.24008 * 359.97438 * 14 13 12 20 20 N 1.31878 * 120.91977 * 0.02562 * 19 14 13 21 21 C 1.31788 * 121.79905 * 0.02562 * 20 19 14 22 22 C 1.38718 * 120.00183 * 359.47826 * 6 5 4 23 23 C 1.50693 * 120.00364 * 180.29154 * 22 6 5 24 24 O 1.42899 * 109.47476 * 285.00532 * 23 22 6 25 25 Si 1.86302 * 109.47495 * 164.99712 * 23 22 6 26 26 H 1.48508 * 109.46475 * 60.00360 * 25 23 22 27 27 H 1.48498 * 109.47258 * 180.02562 * 25 23 22 28 28 H 1.48498 * 109.47281 * 300.00807 * 25 23 22 29 29 C 1.38111 * 119.99881 * 0.27345 * 22 6 5 30 30 H 1.08996 * 109.47264 * 299.99369 * 1 2 3 31 31 H 1.09004 * 109.47397 * 59.99489 * 1 2 3 32 32 H 1.09004 * 109.47131 * 179.97438 * 1 2 3 33 33 H 1.07997 * 120.00160 * 0.02562 * 4 3 2 34 34 H 1.08001 * 119.99998 * 180.24934 * 5 4 3 35 35 H 1.08997 * 109.47418 * 59.99257 * 8 7 6 36 36 H 1.09005 * 109.46636 * 299.99764 * 8 7 6 37 37 H 0.96997 * 119.99541 * 5.26196 * 11 9 8 38 38 H 1.08004 * 120.81278 * 359.97438 * 13 12 11 39 39 H 1.09005 * 109.47078 * 59.99939 * 16 15 14 40 40 H 1.08999 * 109.47373 * 180.02562 * 16 15 14 41 41 H 1.09004 * 109.47078 * 300.00431 * 16 15 14 42 42 H 1.09006 * 109.47332 * 59.99555 * 17 15 14 43 43 H 1.08996 * 109.47734 * 179.97438 * 17 15 14 44 44 H 1.09002 * 109.47247 * 299.99896 * 17 15 14 45 45 H 1.08996 * 109.47311 * 59.99764 * 18 15 14 46 46 H 1.09004 * 109.47343 * 180.02562 * 18 15 14 47 47 H 1.09000 * 109.47151 * 299.99734 * 18 15 14 48 48 H 1.08008 * 119.53699 * 180.30249 * 19 14 13 49 49 H 1.08004 * 119.66854 * 179.97438 * 21 20 19 50 50 H 1.09006 * 109.46863 * 44.99895 * 23 22 6 51 51 H 0.96700 * 114.00019 * 59.99010 * 24 23 22 52 52 H 1.08000 * 120.00393 * 179.97438 * 29 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 1.2911 2.3746 0.0007 5 6 1.9183 3.6055 0.0060 6 6 3.3032 3.6781 0.0003 7 8 3.9206 4.8897 0.0003 8 6 3.0807 6.0458 0.0004 9 6 3.9348 7.2873 0.0011 10 8 5.1439 7.1915 0.0018 11 7 3.3553 8.5041 0.0008 12 6 4.1440 9.6548 -0.1099 13 6 5.3190 9.6369 -0.8568 14 6 6.0656 10.8011 -0.9371 15 14 7.6509 10.8406 -1.9244 16 6 9.0800 10.3752 -0.8236 17 6 7.5340 9.6298 -3.3355 18 6 7.9198 12.5562 -2.5990 19 6 5.6236 11.9334 -0.2790 20 7 4.5058 11.9177 0.4206 21 6 3.7664 10.8316 0.5237 22 6 4.0587 2.5147 0.0001 23 6 5.5636 2.5935 0.0005 24 8 6.0215 2.9671 -1.3005 25 14 6.2724 0.9316 0.4549 26 1 5.8301 -0.0827 -0.5356 27 1 7.7554 1.0094 0.4559 28 1 5.7966 0.5434 1.8070 29 6 3.4317 1.2841 0.0000 30 1 -0.3633 0.5137 0.8900 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 0.2126 2.3180 0.0016 34 1 1.3301 4.5113 0.0106 35 1 2.4514 6.0377 0.8904 36 1 2.4513 6.0378 -0.8895 37 1 2.3915 8.5822 0.0773 38 1 5.6403 8.7375 -1.3612 39 1 8.9226 9.3713 -0.4288 40 1 10.0050 10.3986 -1.3996 41 1 9.1484 11.0836 0.0020 42 1 6.6979 9.9021 -3.9796 43 1 8.4588 9.6531 -3.9119 44 1 7.3767 8.6260 -2.9408 45 1 7.9882 13.2646 -1.7735 46 1 8.8446 12.5791 -3.1755 47 1 7.0838 12.8285 -3.2431 48 1 6.1993 12.8451 -0.3423 49 1 2.8572 10.8572 1.1062 50 1 5.8882 3.3380 0.7275 51 1 5.6909 3.8241 -1.6028 52 1 4.0198 0.3783 -0.0005 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16915418_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:17:40 Heat of formation + Delta-G solvation = -111.212647 kcal Electronic energy + Delta-G solvation = -33628.822714 eV Core-core repulsion = 29104.132303 eV Total energy + Delta-G solvation = -4524.690411 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 390.162 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -42.06750 -41.59562 -40.44697 -39.75997 -38.16349 -36.96665 -36.24853 -33.09904 -32.84598 -31.80403 -30.78253 -29.43525 -29.17687 -28.34374 -28.29496 -27.97379 -26.60567 -24.94381 -24.29698 -23.41166 -22.44398 -21.67564 -19.59981 -19.23079 -18.86952 -18.19337 -18.06037 -17.75049 -17.62439 -17.47686 -16.91390 -16.62144 -16.27154 -15.83272 -15.72683 -15.61176 -15.36719 -15.01160 -14.88791 -14.81838 -14.29984 -14.21985 -14.12734 -14.01383 -13.83117 -13.78963 -13.62150 -13.48453 -13.36054 -13.18021 -13.10969 -13.07233 -12.97906 -12.56460 -12.30772 -12.27953 -12.06352 -11.89358 -11.84166 -11.47455 -11.29887 -11.20339 -11.12051 -11.07327 -10.81123 -10.38925 -10.15322 -10.12447 -9.36870 -8.85219 -0.05015 0.03586 0.23489 0.30539 1.14285 1.27329 1.34136 1.44512 1.48159 1.70955 1.89842 1.97901 2.06139 2.30556 2.45977 2.52506 2.59904 2.88047 3.33661 3.51965 3.65839 3.69042 3.84398 3.86878 3.92465 4.03878 4.06881 4.11197 4.14653 4.20201 4.27941 4.32762 4.36935 4.40254 4.41782 4.66669 4.74964 4.78607 4.78831 4.82687 4.83844 4.90639 4.91099 4.95955 5.03311 5.06727 5.09360 5.13835 5.17983 5.38435 5.54667 5.62015 5.69101 5.75451 6.06104 6.24004 6.40751 6.57477 6.88265 6.97301 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.339 6.339 3 C 0.089 3.911 4 C -0.161 4.161 5 C -0.156 4.156 6 C 0.098 3.902 7 O -0.310 6.310 8 C 0.041 3.959 9 C 0.514 3.486 10 O -0.541 6.541 11 N -0.649 5.649 12 C 0.076 3.924 13 C -0.066 4.066 14 C -0.414 4.414 15 Si 1.131 2.869 16 C -0.466 4.466 17 C -0.463 4.463 18 C -0.453 4.453 19 C 0.096 3.904 20 N -0.500 5.500 21 C 0.081 3.919 22 C -0.115 4.115 23 C -0.086 4.086 24 O -0.549 6.549 25 Si 1.032 2.968 26 H -0.262 1.262 27 H -0.271 1.271 28 H -0.241 1.241 29 C -0.138 4.138 30 H 0.069 0.931 31 H 0.068 0.932 32 H 0.113 0.887 33 H 0.162 0.838 34 H 0.173 0.827 35 H 0.131 0.869 36 H 0.133 0.867 37 H 0.434 0.566 38 H 0.137 0.863 39 H 0.056 0.944 40 H 0.078 0.922 41 H 0.070 0.930 42 H 0.071 0.929 43 H 0.078 0.922 44 H 0.060 0.940 45 H 0.078 0.922 46 H 0.079 0.921 47 H 0.073 0.927 48 H 0.175 0.825 49 H 0.180 0.820 50 H 0.080 0.920 51 H 0.376 0.624 52 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.125 2.089 -0.687 8.418 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.254 6.254 3 C 0.044 3.956 4 C -0.179 4.179 5 C -0.174 4.174 6 C 0.053 3.947 7 O -0.224 6.224 8 C -0.037 4.037 9 C 0.301 3.699 10 O -0.416 6.416 11 N -0.299 5.299 12 C -0.020 4.020 13 C -0.093 4.093 14 C -0.455 4.455 15 Si 1.318 2.682 16 C -0.572 4.572 17 C -0.570 4.570 18 C -0.562 4.562 19 C -0.060 4.060 20 N -0.209 5.209 21 C -0.078 4.078 22 C -0.116 4.116 23 C -0.194 4.194 24 O -0.355 6.355 25 Si 0.853 3.147 26 H -0.186 1.186 27 H -0.196 1.196 28 H -0.164 1.164 29 C -0.157 4.157 30 H 0.088 0.912 31 H 0.086 0.914 32 H 0.131 0.869 33 H 0.179 0.821 34 H 0.190 0.810 35 H 0.148 0.852 36 H 0.150 0.850 37 H 0.275 0.725 38 H 0.154 0.846 39 H 0.075 0.925 40 H 0.097 0.903 41 H 0.089 0.911 42 H 0.090 0.910 43 H 0.097 0.903 44 H 0.079 0.921 45 H 0.097 0.903 46 H 0.098 0.902 47 H 0.092 0.908 48 H 0.192 0.808 49 H 0.197 0.803 50 H 0.098 0.902 51 H 0.224 0.776 52 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -6.723 1.187 0.053 6.827 hybrid contribution -1.132 0.225 -0.355 1.207 sum -7.854 1.411 -0.302 7.986 Atomic orbital electron populations 1.23359 0.76236 1.05577 1.02507 1.86081 1.23584 1.26712 1.89008 1.18997 0.91876 0.85439 0.99298 1.21416 1.01585 0.90880 1.04061 1.21418 0.92131 0.99965 1.03924 1.18647 0.91514 0.84019 1.00553 1.86069 1.35208 1.11665 1.89469 1.22672 0.92250 0.81234 1.07562 1.20765 0.88723 0.85002 0.75394 1.90791 1.16247 1.86889 1.47696 1.43068 1.11651 1.02647 1.72491 1.18953 0.95343 0.88434 0.99313 1.21668 0.93669 0.99111 0.94900 1.28912 1.14909 0.94307 1.07350 0.77120 0.60392 0.66900 0.63819 1.26335 1.15086 1.05016 1.10790 1.26298 1.05071 1.11247 1.14405 1.26145 1.05493 1.17378 1.07151 1.23046 0.91961 0.98948 0.92058 1.67675 1.06930 1.28795 1.17501 1.22992 1.00611 0.87336 0.96899 1.19407 0.96406 0.90660 1.05109 1.25237 0.92186 1.13274 0.88690 1.86645 1.74128 1.42533 1.32238 0.84237 0.78265 0.72543 0.79652 1.18623 1.19597 1.16388 1.20288 0.92842 0.97332 1.05193 0.91240 0.91376 0.86913 0.82062 0.81011 0.85169 0.84975 0.72526 0.84568 0.92467 0.90276 0.91097 0.91006 0.90261 0.92093 0.90290 0.90214 0.90768 0.80811 0.80302 0.90158 0.77557 0.84841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.34 -1.24 10.50 -93.38 -0.98 -2.22 16 3 C 0.09 0.31 6.69 22.49 0.15 0.46 16 4 C -0.16 0.39 9.03 22.35 0.20 0.60 16 5 C -0.16 0.66 9.03 22.36 0.20 0.86 16 6 C 0.10 0.11 6.62 22.49 0.15 0.26 16 7 O -0.31 -0.27 8.56 -74.34 -0.64 -0.91 16 8 C 0.04 -0.31 5.22 71.23 0.37 0.06 16 9 C 0.51 -0.56 7.67 87.66 0.67 0.11 16 10 O -0.54 -4.88 14.19 15.98 0.23 -4.65 16 11 N -0.65 3.47 5.35 -303.20 -1.62 1.85 16 12 C 0.08 0.09 6.31 38.24 0.24 0.34 16 13 C -0.07 -0.25 8.01 22.58 0.18 -0.07 16 14 C -0.41 -0.62 4.59 22.34 0.10 -0.52 16 15 Si 1.13 -4.08 12.39 68.60 0.85 -3.23 16 16 C -0.47 0.09 8.65 113.37 0.98 1.07 16 17 C -0.46 0.60 8.58 113.37 0.97 1.58 16 18 C -0.45 2.14 8.54 113.37 0.97 3.11 16 19 C 0.10 0.26 10.45 84.68 0.89 1.14 16 20 N -0.50 -2.70 10.35 -195.32 -2.02 -4.73 16 21 C 0.08 0.11 11.12 84.86 0.94 1.05 16 22 C -0.11 -0.59 5.28 -19.78 -0.10 -0.70 16 23 C -0.09 -0.53 2.33 71.23 0.17 -0.37 16 24 O -0.55 -4.52 12.65 -148.98 -1.89 -6.41 16 25 Si 1.03 5.76 25.75 68.60 1.77 7.52 16 26 H -0.26 -1.84 6.73 99.48 0.67 -1.17 16 27 H -0.27 -2.11 7.11 99.48 0.71 -1.40 16 28 H -0.24 -0.97 7.11 99.48 0.71 -0.27 16 29 C -0.14 -0.81 8.59 22.35 0.19 -0.62 16 30 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 31 H 0.07 -0.52 7.66 -2.38 -0.02 -0.54 16 32 H 0.11 -0.85 8.14 -2.39 -0.02 -0.87 16 33 H 0.16 -1.33 6.29 -2.91 -0.02 -1.35 16 34 H 0.17 -2.18 6.29 -2.91 -0.02 -2.20 16 35 H 0.13 -1.84 7.65 -2.39 -0.02 -1.86 16 36 H 0.13 -1.88 7.67 -2.38 -0.02 -1.90 16 37 H 0.43 -6.16 8.82 -92.71 -0.82 -6.98 16 38 H 0.14 0.70 6.04 -2.91 -0.02 0.68 16 39 H 0.06 0.17 7.96 -2.38 -0.02 0.15 16 40 H 0.08 -0.12 7.96 -2.39 -0.02 -0.14 16 41 H 0.07 -0.03 7.96 -2.38 -0.02 -0.04 16 42 H 0.07 -0.12 7.96 -2.38 -0.02 -0.14 16 43 H 0.08 -0.18 7.96 -2.39 -0.02 -0.20 16 44 H 0.06 0.06 7.78 -2.39 -0.02 0.04 16 45 H 0.08 -0.45 7.71 -2.39 -0.02 -0.47 16 46 H 0.08 -0.41 7.96 -2.38 -0.02 -0.43 16 47 H 0.07 -0.34 7.96 -2.39 -0.02 -0.36 16 48 H 0.17 -0.43 7.45 -2.91 -0.02 -0.45 16 49 H 0.18 -0.92 8.06 -2.91 -0.02 -0.95 16 50 H 0.08 0.46 7.82 -2.38 -0.02 0.44 16 51 H 0.38 1.75 8.60 -74.06 -0.64 1.12 16 52 H 0.13 0.81 4.89 -2.91 -0.01 0.79 16 Total: 0.00 -26.79 431.48 4.32 -22.47 By element: Atomic # 1 Polarization: -19.31 SS G_CDS: 0.23 Total: -19.08 kcal Atomic # 6 Polarization: 0.99 SS G_CDS: 8.39 Total: 9.38 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: -3.65 Total: -2.88 kcal Atomic # 8 Polarization: -10.91 SS G_CDS: -3.28 Total: -14.19 kcal Atomic # 14 Polarization: 1.67 SS G_CDS: 2.62 Total: 4.29 kcal Total: -26.79 4.32 -22.47 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16915418_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.743 kcal (2) G-P(sol) polarization free energy of solvation -26.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.531 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.318 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.470 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds