Wall clock time and date at job start Sun Mar 7 2021 12:21:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37638 * 125.68053 * 2 1 4 4 C 1.46637 * 126.22842 * 0.02562 * 3 2 1 5 5 O 1.21707 * 120.00453 * 171.76397 * 4 3 2 6 6 N 1.34779 * 119.99928 * 351.76983 * 4 3 2 7 7 C 1.39856 * 120.00195 * 184.66493 * 6 4 3 8 8 C 1.39256 * 120.49516 * 28.61418 * 7 6 4 9 9 C 1.38538 * 118.36304 * 180.28566 * 8 7 6 10 10 Si 1.86804 * 120.38019 * 179.71077 * 9 8 7 11 11 C 1.86300 * 109.47002 * 270.01964 * 10 9 8 12 12 C 1.86300 * 109.47177 * 30.02217 * 10 9 8 13 13 C 1.86305 * 109.46968 * 150.02091 * 10 9 8 14 14 C 1.38236 * 119.24074 * 359.73033 * 9 8 7 15 15 N 1.31884 * 120.92282 * 0.02562 * 14 9 8 16 16 C 1.31794 * 121.80088 * 359.97438 * 15 14 9 17 17 C 1.37910 * 107.54644 * 179.75849 * 3 2 1 18 18 C 1.39873 * 107.09390 * 0.24105 * 17 3 2 19 19 Br 1.89092 * 126.07368 * 179.97438 * 18 17 3 20 20 C 1.35509 * 107.85380 * 359.97438 * 18 17 3 21 21 C 1.50699 * 125.57160 * 179.97438 * 20 18 17 22 22 O 1.42906 * 109.46890 * 299.56220 * 21 20 18 23 23 Si 1.86293 * 109.47235 * 59.56036 * 21 20 18 24 24 H 1.48507 * 109.47192 * 64.30946 * 23 21 20 25 25 H 1.48495 * 109.47595 * 184.31178 * 23 21 20 26 26 H 1.48505 * 109.47216 * 304.31227 * 23 21 20 27 27 H 1.09000 * 109.47258 * 80.35526 * 1 2 3 28 28 H 1.08997 * 109.47319 * 200.35796 * 1 2 3 29 29 H 1.09002 * 109.46825 * 320.35883 * 1 2 3 30 30 H 0.97008 * 119.99974 * 4.66826 * 6 4 3 31 31 H 1.08002 * 120.81814 * 0.02562 * 8 7 6 32 32 H 1.09003 * 109.47159 * 59.99985 * 11 10 9 33 33 H 1.08999 * 109.46949 * 180.02562 * 11 10 9 34 34 H 1.09001 * 109.46946 * 300.00411 * 11 10 9 35 35 H 1.08995 * 109.47500 * 59.99585 * 12 10 9 36 36 H 1.08998 * 109.46964 * 180.02562 * 12 10 9 37 37 H 1.09003 * 109.46858 * 299.99937 * 12 10 9 38 38 H 1.08994 * 109.46788 * 59.99847 * 13 10 9 39 39 H 1.09003 * 109.46784 * 179.97438 * 13 10 9 40 40 H 1.08995 * 109.46774 * 299.99842 * 13 10 9 41 41 H 1.07994 * 119.53856 * 180.02562 * 14 9 8 42 42 H 1.07991 * 119.66979 * 179.97438 * 16 15 14 43 43 H 1.08001 * 126.44921 * 180.27738 * 17 3 2 44 44 H 1.08997 * 109.47199 * 179.56624 * 21 20 18 45 45 H 0.96698 * 113.99899 * 60.00424 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1180 0.0000 4 6 1.8124 2.5119 0.0005 5 8 2.6150 3.4143 0.1515 6 7 0.5050 2.7938 -0.1660 7 6 0.0832 4.1237 -0.2633 8 6 0.9349 5.0995 -0.7747 9 6 0.4738 6.4040 -0.8455 10 14 1.5718 7.7592 -1.5144 11 6 2.5481 8.5131 -0.1183 12 6 2.7420 7.0445 -2.7756 13 6 0.5202 9.0714 -2.3164 14 6 -0.8081 6.6914 -0.4152 15 7 -1.5921 5.7431 0.0597 16 6 -1.1933 4.4899 0.1445 17 6 3.5784 0.6888 0.0055 18 6 3.5530 -0.7097 0.0033 19 35 5.0609 -1.8507 0.0080 20 6 2.2559 -1.1017 -0.0029 21 6 1.7713 -2.5286 -0.0077 22 8 2.2524 -3.1911 -1.1790 23 14 2.4079 -3.4058 1.5075 24 1 1.8247 -2.7818 2.7224 25 1 2.0184 -4.8376 1.4509 26 1 3.8881 -3.2971 1.5572 27 1 -0.3634 0.1722 -1.0131 28 1 -0.3634 -0.9634 0.3575 29 1 -0.3633 0.7914 0.6556 30 1 -0.1435 2.0742 -0.2184 31 1 1.9319 4.8465 -1.1040 32 1 3.1634 7.7454 0.3509 33 1 3.1885 9.3042 -0.5086 34 1 1.8634 8.9312 0.6196 35 1 2.1708 6.6034 -3.5924 36 1 3.3830 7.8352 -3.1656 37 1 3.3572 6.2768 -2.3064 38 1 -0.1645 9.4894 -1.5785 39 1 1.1609 9.8624 -2.7063 40 1 -0.0510 8.6302 -3.1331 41 1 -1.1726 7.7065 -0.4687 42 1 -1.8638 3.7411 0.5394 43 1 4.4585 1.3147 0.0112 44 1 0.6814 -2.5423 -0.0045 45 1 3.2166 -3.2170 -1.2482 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16915418_5000100.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:21:40 Heat of formation + Delta-G solvation = -1.491099 kcal Electronic energy + Delta-G solvation = -28319.026332 eV Core-core repulsion = 24314.978033 eV Total energy + Delta-G solvation = -4004.048298 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 411.053 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.12368 -41.68983 -40.07881 -37.94989 -36.64156 -34.60418 -33.11504 -32.38366 -31.66105 -30.54488 -29.42882 -28.39561 -28.30805 -27.65047 -27.15165 -24.99160 -24.36698 -22.79884 -21.75611 -20.94258 -19.22359 -18.77139 -18.31010 -17.94157 -17.55702 -16.88880 -16.79079 -16.35820 -15.95708 -15.73377 -15.10381 -15.00147 -14.92791 -14.77367 -14.34583 -14.30261 -14.14087 -14.05056 -13.98688 -13.84902 -13.78654 -13.47361 -13.27491 -13.18007 -13.10631 -12.98128 -12.96208 -12.65001 -12.27918 -12.20316 -12.03889 -11.81120 -11.46587 -11.18916 -10.91452 -10.81583 -10.61743 -10.41581 -10.19381 -9.89802 -9.54972 -9.29236 -0.28222 0.08485 0.29245 0.45815 0.80577 1.09996 1.40912 1.45726 1.54923 1.67408 1.75508 1.90381 1.97305 1.98250 2.07109 2.58853 2.84964 3.10594 3.24425 3.41664 3.53226 3.61085 3.74919 3.79398 4.08530 4.11597 4.17663 4.23227 4.25453 4.42817 4.45496 4.54497 4.77924 4.79044 4.82624 4.84222 4.90294 4.90966 4.95227 4.99348 5.11249 5.17436 5.38613 5.54438 5.62129 5.66726 5.68446 5.72094 6.01564 6.30174 6.67558 6.92418 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.402 5.402 3 C -0.056 4.056 4 C 0.594 3.406 5 O -0.537 6.537 6 N -0.658 5.658 7 C 0.071 3.929 8 C -0.069 4.069 9 C -0.413 4.413 10 Si 1.130 2.870 11 C -0.464 4.464 12 C -0.465 4.465 13 C -0.452 4.452 14 C 0.097 3.903 15 N -0.495 5.495 16 C 0.080 3.920 17 C -0.078 4.078 18 C -0.197 4.197 19 Br -0.011 7.011 20 C 0.072 3.928 21 C -0.061 4.061 22 O -0.537 6.537 23 Si 0.935 3.065 24 H -0.255 1.255 25 H -0.249 1.249 26 H -0.214 1.214 27 H 0.113 0.887 28 H 0.133 0.867 29 H 0.107 0.893 30 H 0.422 0.578 31 H 0.140 0.860 32 H 0.057 0.943 33 H 0.079 0.921 34 H 0.071 0.929 35 H 0.069 0.931 36 H 0.080 0.920 37 H 0.059 0.941 38 H 0.079 0.921 39 H 0.079 0.921 40 H 0.073 0.927 41 H 0.178 0.822 42 H 0.181 0.819 43 H 0.157 0.843 44 H 0.149 0.851 45 H 0.382 0.618 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.048 -1.966 -0.940 4.597 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 N -0.078 5.078 3 C -0.169 4.169 4 C 0.383 3.617 5 O -0.413 6.413 6 N -0.309 5.309 7 C -0.025 4.025 8 C -0.097 4.097 9 C -0.453 4.453 10 Si 1.317 2.683 11 C -0.570 4.570 12 C -0.572 4.572 13 C -0.561 4.561 14 C -0.059 4.059 15 N -0.204 5.204 16 C -0.079 4.079 17 C -0.106 4.106 18 C -0.282 4.282 19 Br 0.073 6.927 20 C -0.051 4.051 21 C -0.171 4.171 22 O -0.343 6.343 23 Si 0.753 3.247 24 H -0.179 1.179 25 H -0.172 1.172 26 H -0.136 1.136 27 H 0.131 0.869 28 H 0.152 0.848 29 H 0.125 0.875 30 H 0.267 0.733 31 H 0.158 0.842 32 H 0.076 0.924 33 H 0.098 0.902 34 H 0.090 0.910 35 H 0.088 0.912 36 H 0.099 0.901 37 H 0.078 0.922 38 H 0.098 0.902 39 H 0.099 0.901 40 H 0.092 0.908 41 H 0.195 0.805 42 H 0.197 0.803 43 H 0.175 0.825 44 H 0.167 0.833 45 H 0.232 0.768 Dipole moment (debyes) X Y Z Total from point charges -4.531 -2.108 0.091 4.998 hybrid contribution 0.812 -0.166 -0.439 0.938 sum -3.718 -2.274 -0.348 4.372 Atomic orbital electron populations 1.23016 0.73661 1.08314 1.06461 1.44121 1.07913 1.03613 1.52104 1.20016 0.90915 0.85872 1.20062 1.17114 0.82065 0.86753 0.75727 1.90859 1.54450 1.46633 1.49371 1.43726 1.08540 1.06990 1.71615 1.19041 0.96698 0.85280 1.01515 1.21790 1.00196 0.93019 0.94687 1.28984 1.04742 1.07096 1.04454 0.77151 0.63697 0.62405 0.65065 1.26300 1.09272 1.07207 1.14261 1.26319 1.11339 1.07135 1.12390 1.26133 1.09883 1.12230 1.07852 1.23092 0.90360 0.99264 0.93199 1.67690 1.37154 1.01153 1.14400 1.22935 0.93289 0.94323 0.97387 1.21275 0.95787 0.92822 1.00668 1.20878 0.91902 0.94542 1.20897 1.96672 1.36830 1.61233 1.97974 1.21114 0.89240 0.90720 1.04028 1.24863 1.05768 0.86668 0.99782 1.86532 1.28215 1.77261 1.42320 0.85819 0.84489 0.79867 0.74499 1.17864 1.17188 1.13607 0.86908 0.84845 0.87539 0.73342 0.84211 0.92363 0.90176 0.90967 0.91195 0.90135 0.92154 0.90173 0.90145 0.90829 0.80508 0.80255 0.82501 0.83347 0.76783 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.31 9.26 127.77 1.18 0.87 16 2 N -0.40 1.30 3.16 -519.62 -1.64 -0.34 16 3 C -0.06 -0.14 6.88 40.35 0.28 0.14 16 4 C 0.59 2.75 7.57 86.43 0.65 3.41 16 5 O -0.54 -6.16 14.29 -4.37 -0.06 -6.22 16 6 N -0.66 0.51 5.21 -306.79 -1.60 -1.08 16 7 C 0.07 0.22 6.39 38.27 0.24 0.46 16 8 C -0.07 -0.36 8.03 22.59 0.18 -0.18 16 9 C -0.41 -0.76 4.59 22.34 0.10 -0.66 16 10 Si 1.13 -4.10 12.39 68.60 0.85 -3.25 16 11 C -0.46 0.37 8.65 113.37 0.98 1.35 16 12 C -0.47 0.42 8.58 113.37 0.97 1.39 16 13 C -0.45 2.23 8.54 113.37 0.97 3.20 16 14 C 0.10 0.25 10.45 84.68 0.89 1.13 16 15 N -0.50 -2.62 10.35 -195.30 -2.02 -4.64 16 16 C 0.08 0.15 11.11 84.86 0.94 1.09 16 17 C -0.08 -0.34 10.64 22.59 0.24 -0.10 16 18 C -0.20 -0.45 6.05 22.03 0.13 -0.32 16 19 Br -0.01 -0.02 28.50 -20.37 -0.58 -0.60 16 20 C 0.07 -0.08 5.40 41.34 0.22 0.14 16 21 C -0.06 0.26 2.82 71.24 0.20 0.46 16 22 O -0.54 0.44 12.88 -148.98 -1.92 -1.48 16 23 Si 0.94 -2.59 26.64 68.60 1.83 -0.76 16 24 H -0.25 0.31 7.11 99.48 0.71 1.02 16 25 H -0.25 0.22 7.11 99.48 0.71 0.93 16 26 H -0.21 0.28 5.00 99.48 0.50 0.77 16 27 H 0.11 -1.77 8.00 -2.39 -0.02 -1.79 16 28 H 0.13 -2.34 6.58 -2.39 -0.02 -2.35 16 29 H 0.11 -1.63 6.27 -2.39 -0.01 -1.64 16 30 H 0.42 -3.43 4.53 -92.70 -0.42 -3.85 16 31 H 0.14 0.97 5.72 -2.91 -0.02 0.95 16 32 H 0.06 0.12 7.96 -2.39 -0.02 0.10 16 33 H 0.08 -0.18 7.96 -2.39 -0.02 -0.20 16 34 H 0.07 -0.08 7.96 -2.39 -0.02 -0.10 16 35 H 0.07 -0.06 7.96 -2.39 -0.02 -0.08 16 36 H 0.08 -0.18 7.96 -2.39 -0.02 -0.20 16 37 H 0.06 0.10 7.78 -2.39 -0.02 0.08 16 38 H 0.08 -0.49 7.71 -2.39 -0.02 -0.51 16 39 H 0.08 -0.44 7.96 -2.39 -0.02 -0.46 16 40 H 0.07 -0.34 7.96 -2.39 -0.02 -0.36 16 41 H 0.18 -0.52 7.45 -2.91 -0.02 -0.55 16 42 H 0.18 -0.93 8.06 -2.91 -0.02 -0.95 16 43 H 0.16 0.74 8.06 -2.91 -0.02 0.72 16 44 H 0.15 -1.54 6.28 -2.39 -0.02 -1.56 16 45 H 0.38 -1.00 6.67 -74.06 -0.49 -1.50 16 Total: 0.00 -21.21 386.45 3.72 -17.48 By element: Atomic # 1 Polarization: -12.19 SS G_CDS: 0.68 Total: -11.52 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: 8.19 Total: 12.40 kcal Atomic # 7 Polarization: -0.80 SS G_CDS: -5.26 Total: -6.06 kcal Atomic # 8 Polarization: -5.72 SS G_CDS: -1.98 Total: -7.70 kcal Atomic # 14 Polarization: -6.69 SS G_CDS: 2.68 Total: -4.01 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.58 Total: -0.60 kcal Total: -21.21 3.72 -17.48 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16915418_5000100.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.994 kcal (2) G-P(sol) polarization free energy of solvation -21.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.211 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.720 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.485 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.491 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds