Wall clock time and date at job start Sun Mar 7 2021 12:21:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35995 * 117.00398 * 2 1 4 4 C 1.38522 * 120.07021 * 359.97148 * 3 2 1 5 5 C 1.38279 * 120.00108 * 180.02562 * 4 3 2 6 6 C 1.50699 * 119.93174 * 180.02562 * 5 4 3 7 7 O 1.42909 * 109.46889 * 300.00634 * 6 5 4 8 8 Si 1.86300 * 109.47598 * 180.02562 * 6 5 4 9 9 H 1.48493 * 109.46931 * 59.99747 * 8 6 5 10 10 H 1.48499 * 109.47109 * 179.97438 * 8 6 5 11 11 H 1.48504 * 109.46845 * 299.99872 * 8 6 5 12 12 C 1.38209 * 120.14564 * 359.97438 * 5 4 3 13 13 C 1.38288 * 120.14552 * 359.76688 * 12 5 4 14 14 C 1.38523 * 119.99691 * 0.50427 * 13 12 5 15 15 O 1.35998 * 120.07172 * 179.74316 * 14 13 12 16 16 C 1.42903 * 117.00125 * 359.73362 * 15 14 13 17 17 C 1.50693 * 109.47471 * 179.97438 * 16 15 14 18 18 O 1.21289 * 119.99710 * 359.97438 * 17 16 15 19 19 N 1.34773 * 120.00351 * 179.97438 * 17 16 15 20 20 C 1.39949 * 119.99944 * 185.26496 * 19 17 16 21 21 C 1.39243 * 120.49362 * 32.68450 * 20 19 17 22 22 C 1.38539 * 118.36129 * 179.97438 * 21 20 19 23 23 Si 1.86803 * 120.37766 * 180.02562 * 22 21 20 24 24 C 1.86296 * 109.47314 * 269.95292 * 23 22 21 25 25 C 1.86297 * 109.47354 * 29.95578 * 23 22 21 26 26 C 1.86300 * 109.47050 * 149.95502 * 23 22 21 27 27 C 1.38224 * 119.24008 * 359.97438 * 22 21 20 28 28 N 1.31878 * 120.91977 * 0.02562 * 27 22 21 29 29 C 1.31788 * 121.79905 * 0.02562 * 28 27 22 30 30 H 1.08996 * 109.47257 * 300.00383 * 1 2 3 31 31 H 1.09000 * 109.47192 * 60.00355 * 1 2 3 32 32 H 1.08998 * 109.47440 * 180.02562 * 1 2 3 33 33 H 1.08001 * 119.99941 * 0.02562 * 4 3 2 34 34 H 1.08998 * 109.47210 * 59.99721 * 6 5 4 35 35 H 0.96697 * 113.99835 * 299.99598 * 7 6 5 36 36 H 1.08001 * 119.92953 * 180.02562 * 12 5 4 37 37 H 1.08005 * 119.99982 * 180.27554 * 13 12 5 38 38 H 1.08997 * 109.47418 * 59.99209 * 16 15 14 39 39 H 1.09005 * 109.46636 * 299.99715 * 16 15 14 40 40 H 0.96997 * 119.99541 * 5.26196 * 19 17 16 41 41 H 1.08004 * 120.81278 * 359.97438 * 21 20 19 42 42 H 1.09005 * 109.47078 * 59.99939 * 24 23 22 43 43 H 1.08999 * 109.47373 * 180.02562 * 24 23 22 44 44 H 1.09004 * 109.47078 * 300.00431 * 24 23 22 45 45 H 1.09006 * 109.47332 * 59.99555 * 25 23 22 46 46 H 1.08996 * 109.47734 * 179.97438 * 25 23 22 47 47 H 1.09002 * 109.47247 * 299.99896 * 25 23 22 48 48 H 1.08996 * 109.47311 * 59.99764 * 26 23 22 49 49 H 1.09004 * 109.47343 * 180.02562 * 26 23 22 50 50 H 1.09000 * 109.47151 * 299.99734 * 26 23 22 51 51 H 1.08008 * 119.53699 * 180.30249 * 27 22 21 52 52 H 1.08004 * 119.66854 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 1.2935 2.3744 -0.0006 5 6 1.9229 3.6057 -0.0011 6 6 1.1022 4.8696 -0.0012 7 8 0.2773 4.9018 -1.1677 8 14 2.2371 6.3471 -0.0027 9 1 3.0929 6.3125 -1.2158 10 1 1.4283 7.5925 -0.0034 11 1 3.0946 6.3137 1.2092 12 6 3.3030 3.6798 -0.0005 13 6 4.0605 2.5229 0.0055 14 6 3.4363 1.2863 0.0003 15 8 4.1799 0.1475 0.0009 16 6 5.6007 0.3005 0.0011 17 6 6.2523 -1.0583 0.0024 18 8 5.5673 -2.0593 0.0036 19 7 7.5961 -1.1614 0.0023 20 6 8.2015 -2.4183 -0.1077 21 6 7.6011 -3.4289 -0.8542 22 6 8.2391 -4.6560 -0.9338 23 14 7.4842 -6.0510 -1.9204 24 6 6.3692 -7.0582 -0.8191 25 6 6.4924 -5.3477 -3.3319 26 6 8.8383 -7.1387 -2.5944 27 6 9.4412 -4.8359 -0.2756 28 7 9.9839 -3.8582 0.4235 29 6 9.4101 -2.6763 0.5260 30 1 -0.3633 0.5139 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3634 -1.0276 0.0005 33 1 0.2149 2.3193 -0.0006 34 1 0.4736 4.8948 0.8889 35 1 0.7708 4.8821 -1.9990 36 1 3.7909 4.6433 -0.0005 37 1 5.1389 2.5835 0.0104 38 1 5.9069 0.8507 0.8908 39 1 5.9071 0.8498 -0.8892 40 1 8.1436 -0.3643 0.0783 41 1 6.6611 -3.2601 -1.3587 42 1 5.5769 -6.4219 -0.4247 43 1 5.9290 -7.8725 -1.3947 44 1 6.9495 -7.4697 0.0067 45 1 7.1448 -4.7584 -3.9763 46 1 6.0522 -6.1616 -3.9079 47 1 5.7000 -4.7113 -2.9376 48 1 9.4187 -7.5502 -1.7687 49 1 8.3979 -7.9525 -3.1705 50 1 9.4907 -6.5494 -3.2388 51 1 9.9452 -5.7891 -0.3384 52 1 9.8849 -1.9002 1.1081 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16915418_60476.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:21:53 Heat of formation + Delta-G solvation = -108.214716 kcal Electronic energy + Delta-G solvation = -33247.503358 eV Core-core repulsion = 28722.942947 eV Total energy + Delta-G solvation = -4524.560411 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 390.162 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -42.05053 -41.59397 -40.31805 -39.26740 -38.91201 -37.00484 -36.19256 -33.05005 -32.24078 -31.62782 -31.28437 -29.52781 -29.33264 -28.50582 -28.37358 -28.36867 -26.28293 -24.84059 -24.18798 -23.38785 -22.56067 -21.66976 -19.87587 -19.25054 -18.52209 -18.27179 -17.99386 -17.73079 -17.65036 -17.22428 -16.85049 -16.56461 -16.17079 -16.11652 -15.93807 -15.58820 -15.44782 -15.11846 -14.94560 -14.77834 -14.61521 -14.22156 -14.06442 -13.92826 -13.86061 -13.78273 -13.69299 -13.60388 -13.38451 -13.24292 -13.21569 -13.05064 -12.71621 -12.59921 -12.30544 -12.28569 -12.12017 -12.04989 -11.99118 -11.88122 -11.65768 -11.24258 -11.07728 -10.91081 -10.51869 -10.35067 -10.10236 -9.83227 -9.34346 -8.91620 -0.01120 0.11779 0.23759 0.31712 1.07764 1.22168 1.33150 1.36507 1.44102 1.63002 1.84324 1.85341 1.96463 2.26748 2.36307 2.51710 2.53016 2.92522 3.24448 3.36371 3.57569 3.62083 3.63983 3.72759 3.75638 3.85070 3.88473 4.08138 4.17968 4.19187 4.26524 4.29176 4.30253 4.36247 4.49805 4.52044 4.62592 4.71266 4.71947 4.75924 4.76476 4.80753 4.82480 4.93818 5.03466 5.05784 5.06625 5.18755 5.31083 5.46002 5.49410 5.55642 5.59497 5.77271 5.87267 6.06386 6.46867 6.48206 6.82158 7.02842 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.302 6.302 3 C 0.109 3.891 4 C -0.144 4.144 5 C -0.114 4.114 6 C -0.079 4.079 7 O -0.539 6.539 8 Si 0.952 3.048 9 H -0.251 1.251 10 H -0.254 1.254 11 H -0.250 1.250 12 C -0.122 4.122 13 C -0.168 4.168 14 C 0.103 3.897 15 O -0.277 6.277 16 C 0.041 3.959 17 C 0.515 3.485 18 O -0.488 6.488 19 N -0.667 5.667 20 C 0.083 3.917 21 C -0.046 4.046 22 C -0.406 4.406 23 Si 1.070 2.930 24 C -0.450 4.450 25 C -0.451 4.451 26 C -0.449 4.449 27 C 0.111 3.889 28 N -0.473 5.473 29 C 0.088 3.912 30 H 0.056 0.944 31 H 0.058 0.942 32 H 0.103 0.897 33 H 0.143 0.857 34 H 0.119 0.881 35 H 0.377 0.623 36 H 0.126 0.874 37 H 0.139 0.861 38 H 0.098 0.902 39 H 0.099 0.901 40 H 0.415 0.585 41 H 0.144 0.856 42 H 0.071 0.929 43 H 0.072 0.928 44 H 0.070 0.930 45 H 0.069 0.931 46 H 0.074 0.926 47 H 0.071 0.929 48 H 0.071 0.929 49 H 0.074 0.926 50 H 0.071 0.929 51 H 0.157 0.843 52 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.149 3.533 -1.681 4.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.215 6.215 3 C 0.063 3.937 4 C -0.163 4.163 5 C -0.114 4.114 6 C -0.189 4.189 7 O -0.344 6.344 8 Si 0.774 3.226 9 H -0.175 1.175 10 H -0.178 1.178 11 H -0.174 1.174 12 C -0.140 4.140 13 C -0.187 4.187 14 C 0.057 3.943 15 O -0.189 6.189 16 C -0.038 4.038 17 C 0.301 3.699 18 O -0.359 6.359 19 N -0.315 5.315 20 C -0.013 4.013 21 C -0.074 4.074 22 C -0.449 4.449 23 Si 1.260 2.740 24 C -0.558 4.558 25 C -0.559 4.559 26 C -0.557 4.557 27 C -0.047 4.047 28 N -0.181 5.181 29 C -0.072 4.072 30 H 0.075 0.925 31 H 0.076 0.924 32 H 0.121 0.879 33 H 0.161 0.839 34 H 0.137 0.863 35 H 0.224 0.776 36 H 0.144 0.856 37 H 0.156 0.844 38 H 0.116 0.884 39 H 0.117 0.883 40 H 0.251 0.749 41 H 0.162 0.838 42 H 0.090 0.910 43 H 0.091 0.909 44 H 0.089 0.911 45 H 0.088 0.912 46 H 0.093 0.907 47 H 0.090 0.910 48 H 0.091 0.909 49 H 0.093 0.907 50 H 0.090 0.910 51 H 0.174 0.826 52 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 1.492 3.095 -0.770 3.521 hybrid contribution -0.327 0.709 -0.524 0.941 sum 1.166 3.804 -1.294 4.184 Atomic orbital electron populations 1.23141 0.78012 1.04444 1.01457 1.86244 1.21427 1.25299 1.88518 1.18275 0.88935 0.85639 1.00874 1.20939 1.00525 0.90253 1.04546 1.20027 0.93548 0.95399 1.02468 1.24968 1.00455 1.01501 0.92007 1.86515 1.35600 1.96911 1.15341 0.85655 0.77947 0.77219 0.81745 1.17452 1.17768 1.17396 1.20721 0.93073 0.98085 1.02140 1.20966 1.00402 0.90711 1.06619 1.18242 0.88285 0.85580 1.02181 1.86264 1.15688 1.27916 1.89046 1.22407 0.81647 0.95306 1.04444 1.20220 0.81879 0.91147 0.76663 1.90809 1.62310 1.37858 1.44971 1.43200 1.06443 1.08135 1.73724 1.18853 0.95997 0.86843 0.99599 1.21543 0.99603 0.92130 0.94115 1.28450 1.00765 1.08178 1.07494 0.78035 0.66462 0.63769 0.65691 1.26121 1.10385 1.09108 1.10166 1.26137 1.09112 1.07032 1.13596 1.26121 1.12866 1.09933 1.06783 1.22668 0.92450 0.97437 0.92100 1.67668 1.33646 1.00170 1.16645 1.22607 0.92513 0.95204 0.96833 0.92490 0.92385 0.87869 0.83895 0.86342 0.77580 0.85619 0.84369 0.88383 0.88281 0.74901 0.83806 0.90965 0.90853 0.91104 0.91167 0.90723 0.91015 0.90946 0.90686 0.90976 0.82584 0.82700 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.30 -1.11 10.28 -34.20 -0.35 -1.47 16 3 C 0.11 0.30 6.70 -39.12 -0.26 0.03 16 4 C -0.14 -0.13 8.60 -39.46 -0.34 -0.47 16 5 C -0.11 0.00 5.39 -104.62 -0.56 -0.56 16 6 C -0.08 0.09 2.82 36.00 0.10 0.19 16 7 O -0.54 0.24 12.77 -35.23 -0.45 -0.21 16 8 Si 0.95 -1.38 25.06 -169.99 -4.26 -5.64 16 9 H -0.25 0.35 7.11 56.52 0.40 0.75 16 10 H -0.25 -0.05 7.11 56.52 0.40 0.36 16 11 H -0.25 0.26 7.11 56.52 0.40 0.66 16 12 C -0.12 0.07 8.66 -39.57 -0.34 -0.27 16 13 C -0.17 0.09 9.04 -39.46 -0.36 -0.26 16 14 C 0.10 0.22 6.70 -39.12 -0.26 -0.05 16 15 O -0.28 -0.84 9.46 -47.35 -0.45 -1.29 16 16 C 0.04 -0.06 5.22 36.00 0.19 0.13 16 17 C 0.52 0.53 7.67 -10.99 -0.08 0.45 16 18 O -0.49 -2.76 14.19 -14.36 -0.20 -2.96 16 19 N -0.67 0.89 5.35 -9.77 -0.05 0.84 16 20 C 0.08 0.11 6.31 -83.54 -0.53 -0.42 16 21 C -0.05 -0.10 8.01 -39.10 -0.31 -0.41 16 22 C -0.41 -0.37 4.59 -39.48 -0.18 -0.55 16 23 Si 1.07 -1.74 12.39 -169.99 -2.11 -3.85 16 24 C -0.45 0.10 8.65 101.05 0.87 0.98 16 25 C -0.45 0.28 8.58 101.05 0.87 1.15 16 26 C -0.45 0.80 8.54 101.05 0.86 1.66 16 27 C 0.11 0.17 10.45 -17.54 -0.18 -0.01 16 28 N -0.47 -1.44 10.35 -13.09 -0.14 -1.57 16 29 C 0.09 0.11 11.12 -17.33 -0.19 -0.08 16 30 H 0.06 -0.08 7.66 -51.93 -0.40 -0.48 16 31 H 0.06 -0.08 7.66 -51.93 -0.40 -0.47 16 32 H 0.10 -0.15 8.14 -51.93 -0.42 -0.58 16 33 H 0.14 -0.04 6.30 -52.49 -0.33 -0.37 16 34 H 0.12 -0.22 7.96 -51.93 -0.41 -0.64 16 35 H 0.38 -1.33 8.70 45.56 0.40 -0.93 16 36 H 0.13 -0.27 4.87 -52.49 -0.26 -0.53 16 37 H 0.14 -0.52 6.30 -52.48 -0.33 -0.85 16 38 H 0.10 -0.43 7.65 -51.93 -0.40 -0.82 16 39 H 0.10 -0.44 7.68 -51.93 -0.40 -0.83 16 40 H 0.41 -2.23 8.82 -40.82 -0.36 -2.59 16 41 H 0.14 0.37 6.04 -52.48 -0.32 0.06 16 42 H 0.07 0.07 7.96 -51.93 -0.41 -0.35 16 43 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 44 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 45 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 46 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 47 H 0.07 0.02 7.78 -51.93 -0.40 -0.39 16 48 H 0.07 -0.15 7.71 -51.93 -0.40 -0.55 16 49 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 50 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 51 H 0.16 -0.13 7.45 -52.48 -0.39 -0.52 16 52 H 0.16 -0.24 8.06 -52.48 -0.42 -0.67 16 LS Contribution 432.55 15.07 6.52 6.52 Total: 0.00 -11.69 432.55 -8.15 -19.83 By element: Atomic # 1 Polarization: -5.76 SS G_CDS: -6.93 Total: -12.69 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: 0.28 Total: 2.49 kcal Atomic # 7 Polarization: -0.55 SS G_CDS: -0.19 Total: -0.73 kcal Atomic # 8 Polarization: -4.47 SS G_CDS: -1.45 Total: -5.93 kcal Atomic # 14 Polarization: -3.12 SS G_CDS: -6.37 Total: -9.49 kcal Total LS contribution 6.52 Total: 6.52 kcal Total: -11.69 -8.15 -19.83 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16915418_60476.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.381 kcal (2) G-P(sol) polarization free energy of solvation -11.689 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.145 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.834 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.215 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds