Wall clock time and date at job start Sun Mar 7 2021 06:07:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.37865 * 126.45760 * 2 1 4 4 C 1.46681 * 126.23374 * 0.03774 * 3 2 1 5 5 O 1.21694 * 119.99902 * 351.43337 * 4 3 2 6 6 N 1.34777 * 120.00289 * 171.44205 * 4 3 2 7 7 C 1.45804 * 122.93913 * 172.74359 * 6 4 3 8 8 C 1.54908 * 115.33544 * 146.34074 * 7 6 4 9 9 Si 1.89796 * 100.40542 * 6.57432 * 8 7 6 10 10 C 1.86309 * 111.85491 * 131.74352 * 9 8 7 11 11 C 1.86301 * 111.85401 * 257.78619 * 9 8 7 12 12 C 1.49259 * 122.91412 * 352.77949 * 6 4 3 13 13 N 1.37655 * 107.53550 * 180.29958 * 3 2 1 14 14 C 1.35536 * 108.64312 * 359.56624 * 13 3 2 15 15 C 1.50693 * 125.56624 * 180.20627 * 14 13 3 16 16 O 1.42899 * 109.47142 * 300.29294 * 15 14 13 17 17 Si 1.86298 * 109.47252 * 180.29634 * 15 14 13 18 18 H 1.48501 * 109.47216 * 180.02562 * 17 15 14 19 19 H 1.48502 * 109.46991 * 300.00075 * 17 15 14 20 20 H 1.48497 * 109.47295 * 59.99563 * 17 15 14 21 21 C 1.35454 * 108.86999 * 0.44032 * 14 13 3 22 22 H 1.09005 * 109.47003 * 90.00389 * 1 2 3 23 23 H 1.08999 * 109.47156 * 209.99732 * 1 2 3 24 24 H 1.08994 * 109.47612 * 329.99811 * 1 2 3 25 25 H 1.09002 * 108.28520 * 24.87555 * 7 6 4 26 26 H 1.08998 * 108.28941 * 267.81122 * 7 6 4 27 27 H 1.09008 * 111.22513 * 124.36206 * 8 7 6 28 28 H 1.08997 * 111.22786 * 248.73374 * 8 7 6 29 29 H 1.09000 * 109.47079 * 59.99653 * 10 9 8 30 30 H 1.08997 * 109.46859 * 180.02562 * 10 9 8 31 31 H 1.09003 * 109.46931 * 299.99697 * 10 9 8 32 32 H 1.08999 * 109.47233 * 59.99696 * 11 9 8 33 33 H 1.09005 * 109.46876 * 180.02562 * 11 9 8 34 34 H 1.09006 * 109.46711 * 300.00028 * 11 9 8 35 35 H 1.09004 * 111.63959 * 102.73844 * 12 6 4 36 36 H 1.08996 * 111.66213 * 337.31243 * 12 6 4 37 37 H 0.96999 * 125.68155 * 179.70434 * 13 3 2 38 38 H 1.08999 * 109.46996 * 60.29602 * 15 14 13 39 39 H 0.96698 * 114.00217 * 179.97438 * 16 15 14 40 40 H 1.07997 * 126.06943 * 179.69833 * 21 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1088 0.0000 4 6 1.8898 2.5092 0.0008 5 8 0.7137 2.7801 -0.1555 6 7 2.7913 3.4960 0.1744 7 6 2.4576 4.9084 0.0341 8 6 3.2270 5.8680 0.9759 9 14 4.4562 4.6582 1.7681 10 6 6.1974 5.3205 1.7394 11 6 3.9365 4.1691 3.4890 12 6 4.2186 3.2378 0.5263 13 7 3.6283 0.6625 -0.0069 14 6 3.6218 -0.6929 -0.0013 15 6 4.8433 -1.5753 -0.0015 16 8 5.6238 -1.3081 -1.1683 17 14 4.3182 -3.3627 -0.0017 18 1 5.5220 -4.2323 -0.0012 19 1 3.5071 -3.6405 1.2108 20 1 3.5069 -3.6402 -1.2141 21 6 2.3379 -1.1248 -0.0009 22 1 -0.3633 -0.0001 -1.0277 23 1 -0.3633 -0.8900 0.5138 24 1 -0.3634 0.8899 0.5138 25 1 1.3905 5.0279 0.2216 26 1 2.6572 5.2064 -0.9952 27 1 3.7447 6.6437 0.4116 28 1 2.5637 6.3036 1.7230 29 1 6.2381 6.2595 2.2915 30 1 6.8689 4.5972 2.2020 31 1 6.5038 5.4921 0.7075 32 1 2.9596 3.6872 3.4503 33 1 4.6675 3.4765 3.9062 34 1 3.8786 5.0579 4.1174 35 1 4.8722 3.3475 -0.3392 36 1 4.3465 2.2646 1.0001 37 1 4.4190 1.2243 -0.0125 38 1 5.4387 -1.3716 0.8885 39 1 6.4278 -1.8413 -1.2343 40 1 2.0136 -2.1549 -0.0016 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16915426_13940406.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:07:31 Heat of formation + Delta-G solvation = -46.955593 kcal Electronic energy + Delta-G solvation = -20880.391670 eV Core-core repulsion = 17819.831837 eV Total energy + Delta-G solvation = -3060.559832 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 282.131 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -42.54550 -40.13089 -37.81283 -36.98727 -33.55172 -32.38323 -30.83393 -29.48094 -28.73457 -28.37523 -27.49927 -26.56116 -23.81555 -21.70414 -21.22472 -20.03367 -18.67492 -18.47360 -17.24290 -16.96434 -16.62041 -16.14379 -15.47302 -15.16680 -14.91346 -14.63099 -14.51289 -14.31569 -14.14498 -14.12265 -13.91683 -13.60579 -13.55103 -13.47988 -13.37647 -13.21848 -13.15849 -12.96635 -12.46894 -12.34467 -12.08988 -11.94916 -11.45465 -11.16483 -10.94670 -10.66865 -10.53591 -9.68055 -9.57657 -8.97604 0.48369 0.99837 1.07814 1.39971 1.48123 1.52553 1.56981 1.67565 1.85727 1.90155 2.17307 2.26820 2.51748 3.19762 3.53560 3.75436 3.99117 4.03568 4.10389 4.15634 4.25699 4.41493 4.46718 4.48153 4.50345 4.53571 4.56901 4.81468 4.86272 4.93444 4.97118 5.01472 5.11685 5.25094 5.31143 5.33341 5.44904 5.50883 5.81017 6.01408 6.32111 6.36486 6.46320 7.23301 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.067 4.067 3 C -0.049 4.049 4 C 0.597 3.403 5 O -0.524 6.524 6 N -0.606 5.606 7 C 0.108 3.892 8 C -0.406 4.406 9 Si 0.994 3.006 10 C -0.442 4.442 11 C -0.443 4.443 12 C -0.213 4.213 13 N -0.525 5.525 14 C 0.063 3.937 15 C -0.068 4.068 16 O -0.549 6.549 17 Si 0.971 3.029 18 H -0.255 1.255 19 H -0.246 1.246 20 H -0.243 1.243 21 C -0.205 4.205 22 H 0.070 0.930 23 H 0.064 0.936 24 H 0.078 0.922 25 H 0.086 0.914 26 H 0.062 0.938 27 H 0.094 0.906 28 H 0.090 0.910 29 H 0.077 0.923 30 H 0.073 0.927 31 H 0.075 0.925 32 H 0.073 0.927 33 H 0.072 0.928 34 H 0.077 0.923 35 H 0.087 0.913 36 H 0.093 0.907 37 H 0.422 0.578 38 H 0.078 0.922 39 H 0.385 0.615 40 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.396 0.007 2.891 7.019 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.075 4.075 3 C -0.162 4.162 4 C 0.388 3.612 5 O -0.400 6.400 6 N -0.340 5.340 7 C -0.014 4.014 8 C -0.493 4.493 9 Si 1.189 2.811 10 C -0.551 4.551 11 C -0.552 4.552 12 C -0.381 4.381 13 N -0.129 5.129 14 C -0.055 4.055 15 C -0.178 4.178 16 O -0.356 6.356 17 Si 0.790 3.210 18 H -0.179 1.179 19 H -0.169 1.169 20 H -0.166 1.166 21 C -0.230 4.230 22 H 0.089 0.911 23 H 0.083 0.917 24 H 0.096 0.904 25 H 0.104 0.896 26 H 0.080 0.920 27 H 0.112 0.888 28 H 0.108 0.892 29 H 0.096 0.904 30 H 0.093 0.907 31 H 0.094 0.906 32 H 0.092 0.908 33 H 0.092 0.908 34 H 0.096 0.904 35 H 0.106 0.894 36 H 0.111 0.889 37 H 0.267 0.733 38 H 0.096 0.904 39 H 0.233 0.767 40 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 5.124 -0.162 2.686 5.788 hybrid contribution 1.084 0.242 -0.140 1.120 sum 6.208 0.080 2.545 6.710 Atomic orbital electron populations 1.20344 0.88870 1.02879 1.02576 1.19875 0.95972 0.90224 1.01449 1.20107 0.83534 0.93282 1.19276 1.16924 0.84966 0.82736 0.76580 1.90832 1.16188 1.82853 1.50149 1.48228 1.08759 1.06196 1.70866 1.21006 1.01737 0.79051 0.99575 1.26667 1.10960 1.05852 1.05807 0.80360 0.67858 0.65807 0.67050 1.25985 1.17079 1.06894 1.05130 1.25991 1.06147 1.06047 1.16978 1.27715 0.84829 1.14224 1.11333 1.42815 1.07733 1.06425 1.55891 1.19860 0.94849 0.83258 1.07522 1.24556 0.92386 1.09974 0.90849 1.86497 1.39689 1.67097 1.42267 0.85358 0.81061 0.72024 0.82530 1.17911 1.16875 1.16623 1.20528 0.90825 0.99103 1.12541 0.91136 0.91719 0.90361 0.89597 0.92012 0.88777 0.89154 0.90428 0.90746 0.90635 0.90832 0.90838 0.90416 0.89439 0.88922 0.73260 0.90426 0.76727 0.83779 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.31 9.75 36.00 0.35 0.04 16 2 C -0.07 -0.29 6.21 -104.16 -0.65 -0.93 16 3 C -0.05 -0.20 6.73 -81.98 -0.55 -0.75 16 4 C 0.60 2.89 7.72 -12.85 -0.10 2.79 16 5 O -0.52 -4.06 14.65 5.19 0.08 -3.98 16 6 N -0.61 -0.96 2.84 -111.64 -0.32 -1.27 16 7 C 0.11 0.07 6.27 -3.41 -0.02 0.05 16 8 C -0.41 0.91 5.93 38.16 0.23 1.14 16 9 Si 0.99 -3.87 13.70 -169.99 -2.33 -6.20 16 10 C -0.44 1.73 8.65 101.05 0.87 2.60 16 11 C -0.44 1.04 8.65 101.05 0.87 1.91 16 12 C -0.21 0.41 4.56 61.38 0.28 0.69 16 13 N -0.53 -0.98 5.14 -5.70 -0.03 -1.01 16 14 C 0.06 0.12 6.51 -81.95 -0.53 -0.41 16 15 C -0.07 0.07 3.07 36.00 0.11 0.18 16 16 O -0.55 0.47 12.86 -35.23 -0.45 0.02 16 17 Si 0.97 -1.19 25.83 -169.99 -4.39 -5.58 16 18 H -0.26 0.38 7.11 56.52 0.40 0.79 16 19 H -0.25 0.13 7.11 56.52 0.40 0.53 16 20 H -0.24 -0.16 7.11 56.52 0.40 0.24 16 21 C -0.21 -0.59 9.27 -39.98 -0.37 -0.96 16 22 H 0.07 0.24 8.14 -51.93 -0.42 -0.19 16 23 H 0.06 0.10 8.14 -51.93 -0.42 -0.32 16 24 H 0.08 0.37 6.70 -51.93 -0.35 0.02 16 25 H 0.09 0.21 7.34 -51.93 -0.38 -0.17 16 26 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 27 H 0.09 -0.30 8.05 -51.92 -0.42 -0.72 16 28 H 0.09 -0.20 8.05 -51.93 -0.42 -0.62 16 29 H 0.08 -0.29 7.96 -51.93 -0.41 -0.70 16 30 H 0.07 -0.30 7.96 -51.93 -0.41 -0.72 16 31 H 0.07 -0.29 7.96 -51.93 -0.41 -0.71 16 32 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 33 H 0.07 -0.20 7.96 -51.93 -0.41 -0.62 16 34 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 35 H 0.09 -0.27 8.07 -51.93 -0.42 -0.69 16 36 H 0.09 -0.22 5.01 -51.93 -0.26 -0.48 16 37 H 0.42 -0.16 5.36 -40.82 -0.22 -0.38 16 38 H 0.08 -0.27 7.96 -51.93 -0.41 -0.68 16 39 H 0.38 -2.09 8.74 45.56 0.40 -1.69 16 40 H 0.14 0.17 6.17 -52.49 -0.32 -0.16 16 LS Contribution 323.30 15.07 4.87 4.87 Total: 0.00 -8.10 323.30 -7.42 -15.52 By element: Atomic # 1 Polarization: -3.38 SS G_CDS: -5.35 Total: -8.73 kcal Atomic # 6 Polarization: 5.86 SS G_CDS: 0.49 Total: 6.35 kcal Atomic # 7 Polarization: -1.93 SS G_CDS: -0.35 Total: -2.28 kcal Atomic # 8 Polarization: -3.59 SS G_CDS: -0.38 Total: -3.97 kcal Atomic # 14 Polarization: -5.06 SS G_CDS: -6.72 Total: -11.77 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -8.10 -7.42 -15.52 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16915426_13940406.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.435 kcal (2) G-P(sol) polarization free energy of solvation -8.099 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.534 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.422 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.521 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.956 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds