Wall clock time and date at job start Sun Mar 7 2021 10:48:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86295 * 109.46991 * 2 1 4 4 C 1.50697 * 109.47159 * 120.00273 * 2 1 3 5 5 C 1.34458 * 126.47836 * 254.97113 * 4 2 1 6 6 N 1.36561 * 109.98206 * 180.02562 * 5 4 2 7 7 C 1.37825 * 109.86643 * 0.02562 * 6 5 4 8 8 C 1.38646 * 133.38553 * 180.02562 * 7 6 5 9 9 C 1.39323 * 119.66652 * 179.97438 * 8 7 6 10 10 C 1.47580 * 119.82958 * 179.97438 * 9 8 7 11 11 O 1.21584 * 119.99929 * 359.97438 * 10 9 8 12 12 N 1.34771 * 119.99530 * 180.02562 * 10 9 8 13 13 C 1.46505 * 119.99622 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.47212 * 179.97438 * 13 12 10 15 15 F 1.39905 * 109.47246 * 305.00199 * 14 13 12 16 16 C 1.53004 * 109.47236 * 64.99775 * 14 13 12 17 17 C 1.52997 * 109.47236 * 180.02562 * 16 14 13 18 18 C 1.52997 * 109.47504 * 300.00184 * 17 16 14 19 19 H 1.09000 * 109.47400 * 180.02562 * 18 17 16 20 20 C 1.53001 * 109.46902 * 300.00351 * 18 17 16 21 21 O 1.42907 * 109.46829 * 294.99763 * 20 18 17 22 22 C 1.53004 * 109.47024 * 59.99687 * 18 17 16 23 23 C 1.52997 * 109.47504 * 184.99959 * 14 13 12 24 24 C 1.40202 * 120.33460 * 0.25287 * 9 8 7 25 25 C 1.36230 * 120.37854 * 359.46128 * 24 9 8 26 26 C 1.39873 * 119.95998 * 0.55626 * 25 24 9 27 27 H 0.96701 * 114.00434 * 60.00090 * 1 2 3 28 28 H 1.08998 * 109.46748 * 239.99862 * 2 1 3 29 29 H 1.48501 * 110.00262 * 59.99914 * 3 2 1 30 30 H 1.48499 * 109.99944 * 181.32189 * 3 2 1 31 31 H 1.07995 * 125.00914 * 359.97438 * 5 4 2 32 32 H 0.97002 * 125.07053 * 180.02562 * 6 5 4 33 33 H 1.07997 * 120.16524 * 0.02562 * 8 7 6 34 34 H 0.96996 * 120.00772 * 359.97438 * 12 10 9 35 35 H 1.09002 * 109.47068 * 299.99729 * 13 12 10 36 36 H 1.09001 * 109.47372 * 59.99816 * 13 12 10 37 37 H 1.09001 * 109.46917 * 300.00567 * 16 14 13 38 38 H 1.09004 * 109.46741 * 59.99889 * 16 14 13 39 39 H 1.09002 * 109.47196 * 180.02562 * 17 16 14 40 40 H 1.09004 * 109.46881 * 60.00519 * 17 16 14 41 41 H 1.09002 * 109.47541 * 54.99607 * 20 18 17 42 42 H 1.09001 * 109.47367 * 175.00264 * 20 18 17 43 43 H 0.96696 * 113.99843 * 180.02562 * 21 20 18 44 44 H 1.09001 * 109.46917 * 179.97438 * 22 18 17 45 45 H 1.09004 * 109.46741 * 60.00588 * 22 18 17 46 46 H 1.09004 * 109.46881 * 300.00361 * 23 14 13 47 47 H 1.09002 * 109.47016 * 59.99741 * 23 14 13 48 48 H 1.08000 * 119.81048 * 179.72069 * 24 9 8 49 49 H 1.07999 * 120.01838 * 180.27373 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4622 -0.1363 2.3243 6 7 2.8043 -1.0948 3.2349 7 6 2.4959 -2.3432 2.7392 8 6 2.6323 -3.6280 3.2422 9 6 2.2142 -4.7156 2.4783 10 6 2.3582 -6.0847 3.0100 11 8 2.8411 -6.2614 4.1117 12 7 1.9554 -7.1393 2.2737 13 6 2.0979 -8.4984 2.8017 14 6 1.5681 -9.5022 1.7758 15 9 0.2521 -9.1709 1.4357 16 6 2.4445 -9.4610 0.5223 17 6 1.9144 -10.4644 -0.5039 18 6 1.9469 -11.8719 0.0950 19 1 1.5696 -12.5867 -0.6363 20 6 3.3860 -12.2347 0.4668 21 8 4.1798 -12.3101 -0.7191 22 6 1.0705 -11.9131 1.3485 23 6 1.6011 -10.9096 2.3750 24 6 1.6628 -4.5163 1.2048 25 6 1.5199 -3.2569 0.7053 26 6 1.9352 -2.1549 1.4599 27 1 -0.3934 0.4417 -0.7650 28 1 1.7923 -0.5139 -0.8900 29 1 1.5615 2.4679 1.2085 30 1 3.5346 1.7703 -0.0322 31 1 2.5986 0.9261 2.4620 32 1 3.2048 -0.9226 4.1014 33 1 3.0596 -3.7848 4.2215 34 1 1.5706 -6.9984 1.3946 35 1 3.1500 -8.7025 3.0005 36 1 1.5288 -8.5904 3.7268 37 1 2.4210 -8.4584 0.0954 38 1 3.4699 -9.7191 0.7872 39 1 2.5390 -10.4353 -1.3967 40 1 0.8891 -10.2057 -0.7688 41 1 3.7938 -11.4710 1.1291 42 1 3.3980 -13.1995 0.9739 43 1 5.1059 -12.5369 -0.5587 44 1 1.0933 -12.9160 1.7749 45 1 0.0452 -11.6546 1.0836 46 1 2.6265 -11.1676 2.6400 47 1 0.9768 -10.9389 3.2680 48 1 1.3457 -5.3657 0.6181 49 1 1.0903 -3.1098 -0.2746 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16921692_12335838.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:48:05 Heat of formation + Delta-G solvation = -110.281891 kcal Electronic energy + Delta-G solvation = -32715.035157 eV Core-core repulsion = 28136.970947 eV Total energy + Delta-G solvation = -4578.064210 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.168 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -48.80247 -42.47928 -40.77608 -39.98469 -37.85778 -37.49351 -37.14952 -35.85478 -33.35853 -32.62520 -32.06983 -30.78399 -30.60362 -27.98526 -26.49775 -26.04120 -24.44687 -23.89976 -23.60390 -22.19494 -21.35498 -20.60558 -19.82018 -19.30749 -18.53391 -18.43709 -18.30733 -17.54531 -17.25936 -16.96795 -16.80906 -16.24861 -16.19042 -16.01300 -15.65807 -15.45882 -15.29702 -15.07650 -15.05739 -14.77825 -14.69537 -14.62409 -14.42980 -14.17018 -13.83744 -13.80493 -13.78707 -13.29993 -13.23032 -13.21680 -12.80360 -12.61412 -12.55282 -12.41117 -12.18939 -12.07890 -11.90550 -11.45567 -11.33507 -11.10921 -10.93890 -10.84188 -10.75642 -10.22857 -10.16353 -9.35379 -8.82148 -5.04548 -0.26463 0.40137 1.27104 1.32164 1.62584 1.83502 1.93056 2.01006 2.17284 2.93587 3.09195 3.21172 3.33885 3.43582 3.49738 3.52337 3.57556 3.69623 3.76607 3.87564 3.88796 3.99831 4.07203 4.09499 4.19245 4.23982 4.29019 4.29803 4.36398 4.39196 4.46018 4.50208 4.53680 4.55897 4.62541 4.67016 4.74374 4.81962 4.88310 4.98959 5.00670 5.06634 5.20203 5.23364 5.23783 5.29090 5.33360 5.43406 5.48806 5.60000 5.97945 6.34554 6.43510 6.62694 6.70504 7.20431 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.034 4.034 3 Si 0.685 3.315 4 C -0.163 4.163 5 C 0.072 3.928 6 N -0.583 5.583 7 C 0.082 3.918 8 C -0.055 4.055 9 C -0.120 4.120 10 C 0.566 3.434 11 O -0.538 6.538 12 N -0.723 5.723 13 C 0.101 3.899 14 C 0.113 3.887 15 F -0.200 7.200 16 C -0.141 4.141 17 C -0.112 4.112 18 C -0.090 4.090 19 H 0.083 0.917 20 C 0.074 3.926 21 O -0.573 6.573 22 C -0.114 4.114 23 C -0.141 4.141 24 C -0.113 4.113 25 C -0.069 4.069 26 C -0.062 4.062 27 H 0.379 0.621 28 H 0.071 0.929 29 H -0.254 1.254 30 H -0.256 1.256 31 H 0.170 0.830 32 H 0.422 0.578 33 H 0.137 0.863 34 H 0.404 0.596 35 H 0.087 0.913 36 H 0.082 0.918 37 H 0.074 0.926 38 H 0.085 0.915 39 H 0.078 0.922 40 H 0.070 0.930 41 H 0.049 0.951 42 H 0.045 0.955 43 H 0.380 0.620 44 H 0.073 0.927 45 H 0.078 0.922 46 H 0.085 0.915 47 H 0.081 0.919 48 H 0.126 0.874 49 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.177 1.228 -3.677 4.052 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.145 4.145 3 Si 0.586 3.414 4 C -0.171 4.171 5 C -0.057 4.057 6 N -0.185 5.185 7 C -0.024 4.024 8 C -0.076 4.076 9 C -0.125 4.125 10 C 0.354 3.646 11 O -0.416 6.416 12 N -0.376 5.376 13 C -0.023 4.023 14 C 0.094 3.906 15 F -0.180 7.180 16 C -0.179 4.179 17 C -0.150 4.150 18 C -0.108 4.108 19 H 0.101 0.899 20 C -0.003 4.003 21 O -0.378 6.378 22 C -0.151 4.151 23 C -0.179 4.179 24 C -0.132 4.132 25 C -0.088 4.088 26 C -0.067 4.067 27 H 0.227 0.773 28 H 0.089 0.911 29 H -0.178 1.178 30 H -0.180 1.180 31 H 0.187 0.813 32 H 0.260 0.740 33 H 0.155 0.845 34 H 0.241 0.759 35 H 0.105 0.895 36 H 0.100 0.900 37 H 0.093 0.907 38 H 0.104 0.896 39 H 0.096 0.904 40 H 0.089 0.911 41 H 0.068 0.932 42 H 0.064 0.936 43 H 0.227 0.773 44 H 0.092 0.908 45 H 0.097 0.903 46 H 0.103 0.897 47 H 0.100 0.900 48 H 0.144 0.856 49 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 1.553 1.569 -2.057 3.018 hybrid contribution 0.507 -0.451 0.541 0.868 sum 2.060 1.118 -1.516 2.791 Atomic orbital electron populations 1.86544 1.17561 1.81735 1.49429 1.23939 0.85293 1.09199 0.96092 0.95079 0.80827 0.77627 0.87915 1.19619 1.09403 0.91477 0.96551 1.21648 1.00595 0.94115 0.89336 1.41667 1.54827 1.04005 1.18031 1.18067 1.03284 0.86251 0.94802 1.20057 0.99470 0.87946 1.00148 1.19380 1.05102 0.92168 0.95830 1.18115 0.77483 0.84486 0.84521 1.90795 1.44465 1.86204 1.20088 1.45733 1.64729 1.05627 1.21522 1.21962 1.02823 0.80647 0.96904 1.21192 0.78789 0.95146 0.95441 1.92873 1.37820 1.93694 1.93627 1.22195 0.99809 1.01086 0.94770 1.21480 1.02125 0.93102 0.98256 1.21145 0.93751 0.98055 0.97876 0.89895 1.22374 0.91541 0.99433 0.86974 1.86474 1.24931 1.93759 1.32636 1.21522 0.99949 0.99234 0.94429 1.22132 1.03660 0.92555 0.99525 1.20689 1.00515 0.97343 0.94691 1.20173 0.98541 0.90329 0.99720 1.19157 1.00977 0.92853 0.93677 0.77343 0.91096 1.17816 1.18046 0.81311 0.73963 0.84524 0.75920 0.89485 0.89983 0.90704 0.89646 0.90378 0.91140 0.93249 0.93635 0.77302 0.90794 0.90348 0.89651 0.89987 0.85579 0.85059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.20 12.86 -35.23 -0.45 -0.66 16 2 C -0.03 0.00 3.05 36.00 0.11 0.11 16 3 Si 0.68 -1.18 30.79 -169.99 -5.23 -6.41 16 4 C -0.16 -0.40 5.61 -102.74 -0.58 -0.98 16 5 C 0.07 0.10 10.43 -16.78 -0.17 -0.08 16 6 N -0.58 -0.53 6.06 -10.68 -0.06 -0.60 16 7 C 0.08 0.24 7.26 -84.00 -0.61 -0.37 16 8 C -0.05 -0.17 9.61 -39.03 -0.37 -0.55 16 9 C -0.12 -0.35 5.87 -104.95 -0.62 -0.97 16 10 C 0.57 2.08 7.76 -12.45 -0.10 1.98 16 11 O -0.54 -3.72 16.31 5.29 0.09 -3.64 16 12 N -0.72 -0.70 5.12 -61.33 -0.31 -1.01 16 13 C 0.10 0.02 4.85 -4.04 -0.02 0.00 16 14 C 0.11 -0.10 0.84 -90.62 -0.08 -0.17 16 15 F -0.20 -0.25 15.42 2.25 0.03 -0.21 16 16 C -0.14 0.19 4.60 -26.73 -0.12 0.07 16 17 C -0.11 0.06 5.23 -26.73 -0.14 -0.08 16 18 C -0.09 0.08 2.90 -90.62 -0.26 -0.18 16 19 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 20 C 0.07 -0.10 5.72 37.16 0.21 0.11 16 21 O -0.57 0.05 13.19 -35.23 -0.46 -0.42 16 22 C -0.11 0.18 5.33 -26.70 -0.14 0.04 16 23 C -0.14 0.26 4.73 -26.71 -0.13 0.14 16 24 C -0.11 -0.14 9.46 -39.57 -0.37 -0.51 16 25 C -0.07 -0.13 10.03 -39.69 -0.40 -0.53 16 26 C -0.06 -0.20 6.35 -105.04 -0.67 -0.87 16 27 H 0.38 -1.81 8.74 45.56 0.40 -1.41 16 28 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 29 H -0.25 -0.23 7.04 56.52 0.40 0.17 16 30 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 31 H 0.17 -0.12 6.30 -52.49 -0.33 -0.45 16 32 H 0.42 -0.87 8.96 -40.82 -0.37 -1.24 16 33 H 0.14 0.38 7.62 -52.49 -0.40 -0.02 16 34 H 0.40 -0.29 5.45 -40.82 -0.22 -0.51 16 35 H 0.09 -0.01 8.14 -51.93 -0.42 -0.44 16 36 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 37 H 0.07 -0.12 7.18 -51.93 -0.37 -0.49 16 38 H 0.09 -0.15 6.32 -51.93 -0.33 -0.48 16 39 H 0.08 0.03 7.82 -51.93 -0.41 -0.38 16 40 H 0.07 0.00 7.80 -51.93 -0.41 -0.41 16 41 H 0.05 -0.12 4.83 -51.93 -0.25 -0.37 16 42 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 43 H 0.38 -1.49 9.12 45.56 0.42 -1.08 16 44 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 45 H 0.08 -0.06 7.80 -51.93 -0.41 -0.46 16 46 H 0.08 -0.25 6.55 -51.93 -0.34 -0.59 16 47 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 48 H 0.13 -0.18 6.36 -52.49 -0.33 -0.51 16 49 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 LS Contribution 389.24 15.07 5.87 5.87 Total: 0.00 -10.85 389.24 -10.92 -21.77 By element: Atomic # 1 Polarization: -5.93 SS G_CDS: -5.92 Total: -11.85 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -4.46 Total: -2.85 kcal Atomic # 7 Polarization: -1.23 SS G_CDS: -0.38 Total: -1.61 kcal Atomic # 8 Polarization: -3.88 SS G_CDS: -0.83 Total: -4.71 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.03 Total: -0.21 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.23 Total: -6.41 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -10.85 -10.92 -21.77 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16921692_12335838.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.513 kcal (2) G-P(sol) polarization free energy of solvation -10.848 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.921 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.769 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.282 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds