Wall clock time and date at job start Sun Mar 7 2021 10:48:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86295 * 109.46991 * 2 1 4 4 C 1.50697 * 109.47159 * 120.00273 * 2 1 3 5 5 C 1.34458 * 126.47836 * 254.97113 * 4 2 1 6 6 N 1.36561 * 109.98206 * 180.02562 * 5 4 2 7 7 C 1.37825 * 109.86643 * 0.02562 * 6 5 4 8 8 C 1.38646 * 133.38553 * 180.02562 * 7 6 5 9 9 C 1.39323 * 119.66652 * 179.97438 * 8 7 6 10 10 C 1.47580 * 119.82958 * 179.97438 * 9 8 7 11 11 O 1.21584 * 119.99929 * 359.97438 * 10 9 8 12 12 N 1.34771 * 119.99530 * 180.02562 * 10 9 8 13 13 C 1.46505 * 119.99622 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.47212 * 179.97438 * 13 12 10 15 15 F 1.39905 * 109.47246 * 305.00199 * 14 13 12 16 16 C 1.53004 * 109.47236 * 64.99775 * 14 13 12 17 17 C 1.52997 * 109.47236 * 180.02562 * 16 14 13 18 18 C 1.52997 * 109.47504 * 300.00184 * 17 16 14 19 19 H 1.09000 * 109.47400 * 180.02562 * 18 17 16 20 20 C 1.53001 * 109.46902 * 300.00351 * 18 17 16 21 21 O 1.42907 * 109.46829 * 294.99763 * 20 18 17 22 22 C 1.53004 * 109.47024 * 59.99687 * 18 17 16 23 23 C 1.52997 * 109.47504 * 184.99959 * 14 13 12 24 24 C 1.40202 * 120.33460 * 0.25287 * 9 8 7 25 25 C 1.36230 * 120.37854 * 359.46128 * 24 9 8 26 26 C 1.39873 * 119.95998 * 0.55626 * 25 24 9 27 27 H 0.96701 * 114.00434 * 60.00090 * 1 2 3 28 28 H 1.08998 * 109.46748 * 239.99862 * 2 1 3 29 29 H 1.48501 * 110.00262 * 59.99914 * 3 2 1 30 30 H 1.48499 * 109.99944 * 181.32189 * 3 2 1 31 31 H 1.07995 * 125.00914 * 359.97438 * 5 4 2 32 32 H 0.97002 * 125.07053 * 180.02562 * 6 5 4 33 33 H 1.07997 * 120.16524 * 0.02562 * 8 7 6 34 34 H 0.96996 * 120.00772 * 359.97438 * 12 10 9 35 35 H 1.09002 * 109.47068 * 299.99729 * 13 12 10 36 36 H 1.09001 * 109.47372 * 59.99816 * 13 12 10 37 37 H 1.09001 * 109.46917 * 300.00567 * 16 14 13 38 38 H 1.09004 * 109.46741 * 59.99889 * 16 14 13 39 39 H 1.09002 * 109.47196 * 180.02562 * 17 16 14 40 40 H 1.09004 * 109.46881 * 60.00519 * 17 16 14 41 41 H 1.09002 * 109.47541 * 54.99607 * 20 18 17 42 42 H 1.09001 * 109.47367 * 175.00264 * 20 18 17 43 43 H 0.96696 * 113.99843 * 180.02562 * 21 20 18 44 44 H 1.09001 * 109.46917 * 179.97438 * 22 18 17 45 45 H 1.09004 * 109.46741 * 60.00588 * 22 18 17 46 46 H 1.09004 * 109.46881 * 300.00361 * 23 14 13 47 47 H 1.09002 * 109.47016 * 59.99741 * 23 14 13 48 48 H 1.08000 * 119.81048 * 179.72069 * 24 9 8 49 49 H 1.07999 * 120.01838 * 180.27373 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4622 -0.1363 2.3243 6 7 2.8043 -1.0948 3.2349 7 6 2.4959 -2.3432 2.7392 8 6 2.6323 -3.6280 3.2422 9 6 2.2142 -4.7156 2.4783 10 6 2.3582 -6.0847 3.0100 11 8 2.8411 -6.2614 4.1117 12 7 1.9554 -7.1393 2.2737 13 6 2.0979 -8.4984 2.8017 14 6 1.5681 -9.5022 1.7758 15 9 0.2521 -9.1709 1.4357 16 6 2.4445 -9.4610 0.5223 17 6 1.9144 -10.4644 -0.5039 18 6 1.9469 -11.8719 0.0950 19 1 1.5696 -12.5867 -0.6363 20 6 3.3860 -12.2347 0.4668 21 8 4.1798 -12.3101 -0.7191 22 6 1.0705 -11.9131 1.3485 23 6 1.6011 -10.9096 2.3750 24 6 1.6628 -4.5163 1.2048 25 6 1.5199 -3.2569 0.7053 26 6 1.9352 -2.1549 1.4599 27 1 -0.3934 0.4417 -0.7650 28 1 1.7923 -0.5139 -0.8900 29 1 1.5615 2.4679 1.2085 30 1 3.5346 1.7703 -0.0322 31 1 2.5986 0.9261 2.4620 32 1 3.2048 -0.9226 4.1014 33 1 3.0596 -3.7848 4.2215 34 1 1.5706 -6.9984 1.3946 35 1 3.1500 -8.7025 3.0005 36 1 1.5288 -8.5904 3.7268 37 1 2.4210 -8.4584 0.0954 38 1 3.4699 -9.7191 0.7872 39 1 2.5390 -10.4353 -1.3967 40 1 0.8891 -10.2057 -0.7688 41 1 3.7938 -11.4710 1.1291 42 1 3.3980 -13.1995 0.9739 43 1 5.1059 -12.5369 -0.5587 44 1 1.0933 -12.9160 1.7749 45 1 0.0452 -11.6546 1.0836 46 1 2.6265 -11.1676 2.6400 47 1 0.9768 -10.9389 3.2680 48 1 1.3457 -5.3657 0.6181 49 1 1.0903 -3.1098 -0.2746 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16921692_12335838.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:48:03 Heat of formation + Delta-G solvation = -113.220322 kcal Electronic energy + Delta-G solvation = -32715.162577 eV Core-core repulsion = 28136.970947 eV Total energy + Delta-G solvation = -4578.191630 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.168 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -48.83728 -42.58452 -40.98432 -39.92999 -37.92943 -37.49879 -37.13492 -35.97518 -33.45773 -32.65723 -31.97778 -30.88670 -30.70352 -27.97430 -26.49972 -26.00441 -24.51765 -23.87552 -23.70734 -22.17381 -21.53737 -20.69195 -19.75509 -19.41328 -18.60719 -18.34623 -18.25092 -17.63152 -17.29140 -17.07274 -16.79379 -16.32062 -16.21089 -16.12479 -15.70473 -15.52908 -15.32993 -15.09281 -15.05147 -14.85185 -14.77233 -14.64155 -14.57606 -14.09865 -13.88884 -13.84836 -13.70174 -13.28195 -13.21610 -13.12371 -12.79000 -12.71335 -12.59933 -12.39465 -12.16924 -12.08411 -11.93467 -11.42088 -11.32549 -11.12322 -11.03971 -10.89983 -10.72891 -10.34088 -10.15492 -9.49589 -8.93170 -4.91234 -0.44584 0.27361 1.20793 1.37470 1.70007 1.74878 1.81339 2.01068 2.09046 2.76847 3.15295 3.29958 3.42246 3.46027 3.50862 3.54509 3.60029 3.64554 3.70240 3.95134 3.96644 4.00153 4.04788 4.17253 4.18960 4.27827 4.30251 4.35881 4.39335 4.41767 4.47228 4.50397 4.57750 4.60619 4.67762 4.72467 4.75040 4.89108 4.91905 4.98835 5.09082 5.10776 5.13447 5.18013 5.28958 5.30977 5.33936 5.37822 5.38846 5.49071 5.85601 6.29430 6.34995 6.90681 6.99207 7.02749 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.568 6.568 2 C -0.046 4.046 3 Si 0.782 3.218 4 C -0.188 4.188 5 C 0.067 3.933 6 N -0.578 5.578 7 C 0.068 3.932 8 C -0.066 4.066 9 C -0.132 4.132 10 C 0.565 3.435 11 O -0.577 6.577 12 N -0.710 5.710 13 C 0.100 3.900 14 C 0.118 3.882 15 F -0.212 7.212 16 C -0.138 4.138 17 C -0.109 4.109 18 C -0.091 4.091 19 H 0.071 0.929 20 C 0.073 3.927 21 O -0.594 6.594 22 C -0.110 4.110 23 C -0.141 4.141 24 C -0.107 4.107 25 C -0.075 4.075 26 C -0.082 4.082 27 H 0.400 0.600 28 H 0.084 0.916 29 H -0.289 1.289 30 H -0.291 1.291 31 H 0.186 0.814 32 H 0.434 0.566 33 H 0.132 0.868 34 H 0.413 0.587 35 H 0.094 0.906 36 H 0.073 0.927 37 H 0.078 0.922 38 H 0.093 0.907 39 H 0.068 0.932 40 H 0.062 0.938 41 H 0.061 0.939 42 H 0.053 0.947 43 H 0.395 0.605 44 H 0.083 0.917 45 H 0.067 0.933 46 H 0.101 0.899 47 H 0.083 0.917 48 H 0.152 0.848 49 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.173 1.282 -4.546 4.867 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.377 6.377 2 C -0.156 4.156 3 Si 0.686 3.314 4 C -0.195 4.195 5 C -0.062 4.062 6 N -0.182 5.182 7 C -0.039 4.039 8 C -0.087 4.087 9 C -0.136 4.136 10 C 0.354 3.646 11 O -0.458 6.458 12 N -0.363 5.363 13 C -0.024 4.024 14 C 0.099 3.901 15 F -0.192 7.192 16 C -0.175 4.175 17 C -0.147 4.147 18 C -0.110 4.110 19 H 0.089 0.911 20 C -0.004 4.004 21 O -0.402 6.402 22 C -0.147 4.147 23 C -0.178 4.178 24 C -0.127 4.127 25 C -0.093 4.093 26 C -0.088 4.088 27 H 0.251 0.749 28 H 0.102 0.898 29 H -0.217 1.217 30 H -0.218 1.218 31 H 0.203 0.797 32 H 0.274 0.726 33 H 0.150 0.850 34 H 0.251 0.749 35 H 0.112 0.888 36 H 0.091 0.909 37 H 0.097 0.903 38 H 0.112 0.888 39 H 0.087 0.913 40 H 0.081 0.919 41 H 0.079 0.921 42 H 0.071 0.929 43 H 0.244 0.756 44 H 0.102 0.898 45 H 0.086 0.914 46 H 0.119 0.881 47 H 0.102 0.898 48 H 0.170 0.830 49 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 1.527 1.599 -2.968 3.701 hybrid contribution 0.503 -0.468 0.805 1.058 sum 2.030 1.131 -2.163 3.175 Atomic orbital electron populations 1.86486 1.17776 1.82396 1.51088 1.24203 0.85308 1.10504 0.95558 0.93984 0.77237 0.74590 0.85568 1.20102 1.10010 0.91476 0.97929 1.22005 1.00083 0.94877 0.89200 1.41715 1.54484 1.03411 1.18551 1.18185 1.03826 0.86682 0.95232 1.20113 0.99989 0.88425 1.00211 1.19464 1.05820 0.91708 0.96643 1.18267 0.77044 0.85199 0.84123 1.90768 1.46544 1.86746 1.21773 1.45675 1.63590 1.05516 1.21530 1.22041 1.03183 0.80321 0.96903 1.21231 0.78088 0.95368 0.95363 1.92851 1.38835 1.93838 1.93720 1.22178 0.99990 1.01096 0.94243 1.21421 1.01448 0.93660 0.98145 1.21144 0.94488 0.97460 0.97874 0.91082 1.22420 0.90953 1.00229 0.86779 1.86433 1.26314 1.93921 1.33574 1.21476 0.99178 0.99857 0.94204 1.22167 1.04694 0.91629 0.99351 1.20918 0.99575 0.98129 0.94074 1.20435 0.98369 0.90158 1.00374 1.19552 1.01289 0.93854 0.94061 0.74916 0.89775 1.21651 1.21787 0.79678 0.72637 0.85023 0.74862 0.88816 0.90855 0.90328 0.88835 0.91343 0.91909 0.92106 0.92863 0.75579 0.89793 0.91403 0.88094 0.89818 0.83030 0.83353 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -0.04 12.86 -148.98 -1.92 -1.95 16 2 C -0.05 0.03 3.05 71.23 0.22 0.25 16 3 Si 0.78 -3.10 30.79 68.60 2.11 -0.99 16 4 C -0.19 -0.97 5.61 -18.64 -0.10 -1.07 16 5 C 0.07 0.21 10.43 83.09 0.87 1.08 16 6 N -0.58 -1.58 6.06 -187.71 -1.14 -2.72 16 7 C 0.07 0.48 7.26 38.96 0.28 0.76 16 8 C -0.07 -0.52 9.61 22.63 0.22 -0.30 16 9 C -0.13 -0.89 5.87 -20.07 -0.12 -1.01 16 10 C 0.56 4.67 7.76 86.71 0.67 5.34 16 11 O -0.58 -8.90 16.31 -3.98 -0.06 -8.96 16 12 N -0.71 -1.46 5.12 -466.23 -2.39 -3.84 16 13 C 0.10 0.04 4.85 86.38 0.42 0.46 16 14 C 0.12 -0.24 0.84 -10.79 -0.01 -0.25 16 15 F -0.21 -0.52 15.42 44.97 0.69 0.17 16 16 C -0.14 0.44 4.60 30.59 0.14 0.58 16 17 C -0.11 0.11 5.23 30.59 0.16 0.27 16 18 C -0.09 0.17 2.90 -10.79 -0.03 0.13 16 19 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 20 C 0.07 -0.26 5.72 71.98 0.41 0.15 16 21 O -0.59 0.34 13.19 -148.98 -1.97 -1.63 16 22 C -0.11 0.38 5.33 30.61 0.16 0.54 16 23 C -0.14 0.61 4.73 30.61 0.14 0.76 16 24 C -0.11 -0.26 9.46 22.28 0.21 -0.05 16 25 C -0.08 -0.28 10.03 22.20 0.22 -0.06 16 26 C -0.08 -0.59 6.35 -20.14 -0.13 -0.72 16 27 H 0.40 -4.28 8.74 -74.06 -0.65 -4.92 16 28 H 0.08 -0.32 7.96 -2.39 -0.02 -0.34 16 29 H -0.29 -0.53 7.04 99.48 0.70 0.17 16 30 H -0.29 -0.50 7.11 99.48 0.71 0.21 16 31 H 0.19 -0.24 6.30 -2.91 -0.02 -0.26 16 32 H 0.43 -1.38 8.96 -92.71 -0.83 -2.21 16 33 H 0.13 1.04 7.62 -2.91 -0.02 1.02 16 34 H 0.41 -0.77 5.45 -92.71 -0.50 -1.27 16 35 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 36 H 0.07 0.19 8.14 -2.39 -0.02 0.17 16 37 H 0.08 -0.30 7.18 -2.39 -0.02 -0.32 16 38 H 0.09 -0.42 6.32 -2.39 -0.02 -0.44 16 39 H 0.07 0.08 7.82 -2.39 -0.02 0.06 16 40 H 0.06 0.03 7.80 -2.38 -0.02 0.01 16 41 H 0.06 -0.37 4.83 -2.39 -0.01 -0.38 16 42 H 0.05 -0.27 8.14 -2.39 -0.02 -0.29 16 43 H 0.39 -3.31 9.12 -74.06 -0.68 -3.98 16 44 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 45 H 0.07 -0.08 7.80 -2.39 -0.02 -0.10 16 46 H 0.10 -0.74 6.55 -2.39 -0.02 -0.76 16 47 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 48 H 0.15 -0.57 6.36 -2.91 -0.02 -0.59 16 49 H 0.15 -0.07 8.06 -2.91 -0.02 -0.09 16 Total: 0.00 -25.77 389.24 -2.51 -28.28 By element: Atomic # 1 Polarization: -13.63 SS G_CDS: -1.58 Total: -15.21 kcal Atomic # 6 Polarization: 3.12 SS G_CDS: 3.74 Total: 6.86 kcal Atomic # 7 Polarization: -3.04 SS G_CDS: -3.53 Total: -6.56 kcal Atomic # 8 Polarization: -8.60 SS G_CDS: -3.95 Total: -12.54 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.69 Total: 0.17 kcal Atomic # 14 Polarization: -3.10 SS G_CDS: 2.11 Total: -0.99 kcal Total: -25.77 -2.51 -28.28 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16921692_12335838.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.936 kcal (2) G-P(sol) polarization free energy of solvation -25.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.707 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.284 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.220 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds