Wall clock time and date at job start Sun Mar 7 2021 10:48:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86300 * 109.47293 * 2 1 4 4 C 1.50698 * 109.47310 * 239.99254 * 2 1 3 5 5 C 1.38329 * 119.92036 * 119.97961 * 4 2 1 6 6 C 1.38459 * 120.28769 * 180.02562 * 5 4 2 7 7 Br 1.89092 * 119.94157 * 179.97438 * 6 5 4 8 8 C 1.38041 * 120.12166 * 359.69583 * 6 5 4 9 9 C 1.39579 * 119.83778 * 0.55576 * 8 6 5 10 10 C 1.47856 * 120.13856 * 179.74295 * 9 8 6 11 11 O 1.21543 * 120.00078 * 179.72594 * 10 9 8 12 12 N 1.34777 * 119.99811 * 359.72422 * 10 9 8 13 13 C 1.46496 * 120.00258 * 179.97438 * 12 10 9 14 14 C 1.52993 * 109.47551 * 180.02562 * 13 12 10 15 15 F 1.39901 * 109.47062 * 305.00513 * 14 13 12 16 16 C 1.53006 * 109.47172 * 65.00257 * 14 13 12 17 17 C 1.52989 * 109.47323 * 180.02562 * 16 14 13 18 18 C 1.53003 * 109.47144 * 299.99619 * 17 16 14 19 19 H 1.09001 * 109.47405 * 179.97438 * 18 17 16 20 20 C 1.53003 * 109.47322 * 300.00220 * 18 17 16 21 21 O 1.42899 * 109.47067 * 295.00027 * 20 18 17 22 22 C 1.53002 * 109.46755 * 60.00347 * 18 17 16 23 23 C 1.52999 * 109.47069 * 299.99612 * 22 18 17 24 24 C 1.37975 * 119.92663 * 300.00929 * 4 2 1 25 25 H 0.96698 * 114.00423 * 300.00121 * 1 2 3 26 26 H 1.09007 * 109.46550 * 119.99945 * 2 1 3 27 27 H 1.48501 * 109.99635 * 178.67677 * 3 2 1 28 28 H 1.48494 * 109.99787 * 299.99457 * 3 2 1 29 29 H 1.08001 * 119.85341 * 0.02562 * 5 4 2 30 30 H 1.07992 * 120.08170 * 180.27767 * 8 6 5 31 31 H 0.96999 * 120.00047 * 0.02562 * 12 10 9 32 32 H 1.09000 * 109.47024 * 300.00478 * 13 12 10 33 33 H 1.09004 * 109.46875 * 60.00324 * 13 12 10 34 34 H 1.09000 * 109.46739 * 300.00557 * 16 14 13 35 35 H 1.08999 * 109.46595 * 59.99675 * 16 14 13 36 36 H 1.09000 * 109.47265 * 179.97438 * 17 16 14 37 37 H 1.08999 * 109.47825 * 60.00092 * 17 16 14 38 38 H 1.09003 * 109.46542 * 54.99562 * 20 18 17 39 39 H 1.08997 * 109.47270 * 174.99265 * 20 18 17 40 40 H 0.96696 * 113.99796 * 180.02562 * 21 20 18 41 41 H 1.09000 * 109.47048 * 180.02562 * 22 18 17 42 42 H 1.08994 * 109.47199 * 60.00046 * 22 18 17 43 43 H 1.08994 * 109.47465 * 300.00271 * 23 22 18 44 44 H 1.08998 * 109.47565 * 179.97438 * 23 22 18 45 45 H 1.07996 * 120.06531 * 359.95044 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2303 5 6 2.7262 -0.0367 -2.1401 6 6 3.1915 -0.6820 -3.2733 7 35 4.2768 0.2488 -4.5108 8 6 2.8693 -2.0052 -3.4985 9 6 2.0633 -2.6886 -2.5866 10 6 1.7094 -4.1044 -2.8242 11 8 1.0115 -4.6986 -2.0260 12 7 2.1608 -4.7361 -3.9259 13 6 1.8107 -6.1391 -4.1610 14 6 2.4461 -6.6108 -5.4704 15 9 2.0603 -5.7577 -6.5099 16 6 3.9700 -6.5914 -5.3338 17 6 4.6054 -7.0625 -6.6433 18 6 4.1393 -8.4865 -6.9530 19 1 4.5917 -8.8220 -7.8862 20 6 4.5614 -9.4199 -5.8165 21 8 5.9876 -9.4920 -5.7641 22 6 2.6156 -8.5059 -7.0897 23 6 1.9800 -8.0348 -5.7801 24 6 1.5970 -2.0315 -1.4471 25 1 -0.3934 0.4417 0.7650 26 1 1.7922 -0.5139 0.8901 27 1 3.5346 1.7701 0.0322 28 1 1.5616 2.4678 -1.2085 29 1 2.9849 0.9973 -1.9656 30 1 3.2363 -2.5092 -4.3803 31 1 2.7180 -4.2621 -4.5627 32 1 2.1813 -6.7490 -3.3372 33 1 0.7270 -6.2370 -4.2267 34 1 4.3020 -5.5769 -5.1134 35 1 4.2705 -7.2560 -4.5238 36 1 5.6910 -7.0483 -6.5461 37 1 4.3048 -6.3976 -7.4530 38 1 4.1821 -9.0345 -4.8701 39 1 4.1535 -10.4151 -5.9932 40 1 6.3269 -10.0679 -5.0654 41 1 2.2834 -9.5205 -7.3099 42 1 2.3149 -7.8410 -7.8993 43 1 2.2807 -8.6997 -4.9705 44 1 0.8945 -8.0482 -5.8775 45 1 0.9766 -2.5563 -0.7358 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16921692_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:48:28 Heat of formation + Delta-G solvation = -140.396024 kcal Electronic energy + Delta-G solvation = -30030.948696 eV Core-core repulsion = 25589.176448 eV Total energy + Delta-G solvation = -4441.772249 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.067 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -48.87520 -41.69769 -40.24459 -39.82512 -37.67406 -37.18042 -36.06835 -33.82095 -33.66466 -32.19410 -31.99135 -30.64967 -28.22008 -27.05644 -26.24300 -24.86119 -23.90601 -22.81855 -22.21555 -21.53817 -19.77336 -19.24112 -18.48691 -18.36792 -17.94263 -17.76304 -17.20303 -16.87171 -16.67488 -16.38373 -16.27871 -16.14698 -15.74821 -15.31256 -15.15856 -14.94894 -14.88825 -14.73371 -14.40442 -14.25470 -14.12406 -13.86328 -13.73222 -13.60879 -13.24193 -13.14528 -12.80785 -12.78797 -12.53595 -12.42115 -12.21390 -12.10880 -11.98363 -11.69728 -11.45054 -11.35643 -11.17951 -11.06931 -10.74519 -10.64649 -10.42780 -10.22736 -10.03511 -4.99949 -0.70082 -0.31231 0.23078 1.20091 1.36677 1.60620 1.76614 1.90433 2.31335 3.06278 3.10256 3.19697 3.28828 3.39820 3.47877 3.53935 3.57174 3.61534 3.73358 3.85281 3.92817 3.94233 4.04184 4.14154 4.17463 4.28914 4.33198 4.39063 4.44558 4.47384 4.54783 4.56951 4.58091 4.65618 4.72396 4.77846 4.88881 4.92066 4.96488 5.03375 5.08214 5.13542 5.22925 5.26497 5.31662 5.35825 6.14187 6.84605 6.85411 6.89681 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.081 4.081 3 Si 0.770 3.230 4 C -0.082 4.082 5 C -0.081 4.081 6 C -0.099 4.099 7 Br -0.029 7.029 8 C -0.048 4.048 9 C -0.133 4.133 10 C 0.565 3.435 11 O -0.562 6.562 12 N -0.711 5.711 13 C 0.099 3.901 14 C 0.117 3.883 15 F -0.212 7.212 16 C -0.138 4.138 17 C -0.110 4.110 18 C -0.091 4.091 19 H 0.070 0.930 20 C 0.074 3.926 21 O -0.595 6.595 22 C -0.110 4.110 23 C -0.140 4.140 24 C -0.023 4.023 25 H 0.407 0.593 26 H 0.104 0.896 27 H -0.279 1.279 28 H -0.291 1.291 29 H 0.134 0.866 30 H 0.160 0.840 31 H 0.411 0.589 32 H 0.098 0.902 33 H 0.077 0.923 34 H 0.076 0.924 35 H 0.095 0.905 36 H 0.067 0.933 37 H 0.061 0.939 38 H 0.062 0.938 39 H 0.054 0.946 40 H 0.395 0.605 41 H 0.084 0.916 42 H 0.066 0.934 43 H 0.102 0.898 44 H 0.084 0.916 45 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.101 -1.089 3.569 3.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.190 4.190 3 Si 0.674 3.326 4 C -0.083 4.083 5 C -0.101 4.101 6 C -0.179 4.179 7 Br 0.057 6.943 8 C -0.068 4.068 9 C -0.137 4.137 10 C 0.353 3.647 11 O -0.442 6.442 12 N -0.364 5.364 13 C -0.024 4.024 14 C 0.098 3.902 15 F -0.193 7.193 16 C -0.175 4.175 17 C -0.147 4.147 18 C -0.110 4.110 19 H 0.088 0.912 20 C -0.004 4.004 21 O -0.403 6.403 22 C -0.148 4.148 23 C -0.178 4.178 24 C -0.042 4.042 25 H 0.259 0.741 26 H 0.122 0.878 27 H -0.206 1.206 28 H -0.219 1.219 29 H 0.151 0.849 30 H 0.178 0.822 31 H 0.249 0.751 32 H 0.116 0.884 33 H 0.095 0.905 34 H 0.095 0.905 35 H 0.114 0.886 36 H 0.086 0.914 37 H 0.079 0.921 38 H 0.080 0.920 39 H 0.072 0.928 40 H 0.245 0.755 41 H 0.103 0.897 42 H 0.085 0.915 43 H 0.121 0.879 44 H 0.103 0.897 45 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 1.515 -0.482 2.154 2.677 hybrid contribution 0.075 -0.700 -0.078 0.709 sum 1.590 -1.183 2.076 2.870 Atomic orbital electron populations 1.86440 1.16715 1.82543 1.51620 1.24840 0.86391 1.11247 0.96557 0.94108 0.77816 0.75293 0.85351 1.19639 0.97932 0.94064 0.96712 1.21209 0.96680 0.99512 0.92691 1.21693 1.03176 0.96025 0.96994 1.96832 1.65534 1.75514 1.56409 1.21432 0.94513 0.92154 0.98692 1.19936 1.02214 0.94010 0.97526 1.18138 0.79311 0.86034 0.81240 1.90798 1.38926 1.67833 1.46597 1.45717 1.53341 1.13279 1.24028 1.22089 1.01259 0.81719 0.97379 1.21259 0.95805 0.90068 0.83053 1.92852 1.92638 1.72918 1.60913 1.22183 0.91962 1.03505 0.99897 1.21419 1.00604 0.95822 0.96896 1.21141 0.95796 0.95205 0.98816 0.91185 1.22417 0.80848 0.98618 0.98475 1.86433 1.21607 1.72319 1.59932 1.21469 0.93307 1.02723 0.97253 1.22158 1.02221 0.93375 1.00032 1.21315 0.94277 0.93222 0.95374 0.74076 0.87820 1.20600 1.21878 0.84866 0.82227 0.75088 0.88376 0.90456 0.90517 0.88619 0.91418 0.92067 0.91995 0.92811 0.75547 0.89733 0.91503 0.87933 0.89698 0.83756 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.49 12.74 -148.98 -1.90 -1.41 16 2 C -0.08 0.13 2.81 71.24 0.20 0.33 16 3 Si 0.77 -2.46 29.78 68.60 2.04 -0.41 16 4 C -0.08 -0.33 5.42 -19.91 -0.11 -0.43 16 5 C -0.08 -0.37 8.41 22.34 0.19 -0.18 16 6 C -0.10 -0.36 6.22 22.28 0.14 -0.22 16 7 Br -0.03 -0.08 33.69 -20.37 -0.69 -0.76 16 8 C -0.05 -0.08 9.28 22.55 0.21 0.13 16 9 C -0.13 -0.61 5.87 -20.09 -0.12 -0.73 16 10 C 0.57 3.44 7.77 86.79 0.67 4.12 16 11 O -0.56 -7.27 16.35 -3.85 -0.06 -7.34 16 12 N -0.71 -0.35 5.12 -465.99 -2.39 -2.73 16 13 C 0.10 -0.12 4.85 86.38 0.42 0.30 16 14 C 0.12 -0.34 0.84 -10.79 -0.01 -0.35 16 15 F -0.21 -0.40 15.42 44.97 0.69 0.30 16 16 C -0.14 0.52 4.60 30.59 0.14 0.67 16 17 C -0.11 0.13 5.22 30.59 0.16 0.29 16 18 C -0.09 0.19 2.90 -10.79 -0.03 0.16 16 19 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 20 C 0.07 -0.29 5.72 71.98 0.41 0.12 16 21 O -0.59 0.53 13.20 -148.98 -1.97 -1.43 16 22 C -0.11 0.43 5.33 30.59 0.16 0.59 16 23 C -0.14 0.73 4.73 30.60 0.14 0.88 16 24 C -0.02 -0.13 9.15 22.53 0.21 0.08 16 25 H 0.41 -4.71 8.74 -74.06 -0.65 -5.36 16 26 H 0.10 -0.61 7.96 -2.38 -0.02 -0.63 16 27 H -0.28 -0.41 7.11 99.48 0.71 0.29 16 28 H -0.29 -1.25 7.11 99.48 0.71 -0.54 16 29 H 0.13 0.51 4.86 -2.91 -0.01 0.50 16 30 H 0.16 -0.55 6.41 -2.91 -0.02 -0.57 16 31 H 0.41 -1.21 5.49 -92.71 -0.51 -1.72 16 32 H 0.10 -0.25 8.14 -2.39 -0.02 -0.27 16 33 H 0.08 0.06 8.14 -2.38 -0.02 0.05 16 34 H 0.08 -0.34 7.18 -2.39 -0.02 -0.35 16 35 H 0.10 -0.52 6.32 -2.39 -0.02 -0.53 16 36 H 0.07 0.08 7.82 -2.39 -0.02 0.06 16 37 H 0.06 0.03 7.80 -2.39 -0.02 0.01 16 38 H 0.06 -0.42 4.83 -2.39 -0.01 -0.43 16 39 H 0.05 -0.30 8.14 -2.39 -0.02 -0.32 16 40 H 0.40 -3.46 9.12 -74.06 -0.68 -4.14 16 41 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 42 H 0.07 -0.09 7.80 -2.39 -0.02 -0.11 16 43 H 0.10 -0.86 6.54 -2.39 -0.02 -0.88 16 44 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 45 H 0.14 0.93 7.65 -2.91 -0.02 0.91 16 Total: 0.00 -20.84 377.01 -2.20 -23.04 By element: Atomic # 1 Polarization: -14.27 SS G_CDS: -0.72 Total: -15.00 kcal Atomic # 6 Polarization: 2.96 SS G_CDS: 2.79 Total: 5.75 kcal Atomic # 7 Polarization: -0.35 SS G_CDS: -2.39 Total: -2.73 kcal Atomic # 8 Polarization: -6.25 SS G_CDS: -3.93 Total: -10.18 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.69 Total: 0.30 kcal Atomic # 14 Polarization: -2.46 SS G_CDS: 2.04 Total: -0.41 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -0.69 Total: -0.76 kcal Total: -20.84 -2.20 -23.04 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16921692_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.351 kcal (2) G-P(sol) polarization free energy of solvation -20.845 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.196 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.200 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.045 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds