Wall clock time and date at job start Sun Mar 7 2021 10:48:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86296 * 109.47043 * 2 1 4 4 C 1.50701 * 109.46847 * 119.99897 * 2 1 3 5 5 C 1.38612 * 119.84456 * 75.00123 * 4 2 1 6 6 F 1.35103 * 119.91535 * 359.97438 * 5 4 2 7 7 C 1.38112 * 120.16873 * 179.97438 * 5 4 2 8 8 C 1.39624 * 119.84848 * 0.02583 * 7 5 4 9 9 C 1.47691 * 120.15187 * 179.97438 * 8 7 5 10 10 O 1.21572 * 119.99715 * 179.97438 * 9 8 7 11 11 N 1.34782 * 120.00269 * 359.97438 * 9 8 7 12 12 C 1.46498 * 120.00089 * 179.97438 * 11 9 8 13 13 C 1.52996 * 109.47353 * 180.02562 * 12 11 9 14 14 F 1.39905 * 109.47193 * 305.00673 * 13 12 11 15 15 C 1.53002 * 109.47105 * 65.00147 * 13 12 11 16 16 C 1.52997 * 109.47297 * 180.02562 * 15 13 12 17 17 C 1.53005 * 109.47200 * 300.00208 * 16 15 13 18 18 H 1.08990 * 109.47398 * 180.02562 * 17 16 15 19 19 C 1.53000 * 109.46867 * 300.00264 * 17 16 15 20 20 O 1.42903 * 109.46726 * 294.99609 * 19 17 16 21 21 C 1.53002 * 109.47165 * 59.99711 * 17 16 15 22 22 C 1.52991 * 109.47387 * 185.00440 * 13 12 11 23 23 C 1.39840 * 119.68933 * 0.26899 * 8 7 5 24 24 F 1.35098 * 120.08299 * 179.70408 * 23 8 7 25 25 C 1.38231 * 119.84273 * 254.97728 * 4 2 1 26 26 H 0.96699 * 113.99757 * 60.00371 * 1 2 3 27 27 H 1.09000 * 109.47430 * 240.00109 * 2 1 3 28 28 H 1.48500 * 110.00076 * 59.99939 * 3 2 1 29 29 H 1.48505 * 110.00181 * 181.31432 * 3 2 1 30 30 H 1.07994 * 120.07491 * 180.02562 * 7 5 4 31 31 H 0.96996 * 119.99433 * 0.02562 * 11 9 8 32 32 H 1.09006 * 109.46707 * 60.00317 * 12 11 9 33 33 H 1.09005 * 109.47520 * 300.00840 * 12 11 9 34 34 H 1.09004 * 109.47011 * 300.00006 * 15 13 12 35 35 H 1.08996 * 109.46657 * 60.00207 * 15 13 12 36 36 H 1.09001 * 109.47187 * 180.02562 * 16 15 13 37 37 H 1.09004 * 109.47198 * 60.00040 * 16 15 13 38 38 H 1.09002 * 109.47398 * 54.99853 * 19 17 16 39 39 H 1.09001 * 109.47194 * 175.00033 * 19 17 16 40 40 H 0.96700 * 113.99509 * 180.02562 * 20 19 17 41 41 H 1.09004 * 109.46964 * 60.00333 * 21 17 16 42 42 H 1.08994 * 109.47359 * 180.02562 * 21 17 16 43 43 H 1.09001 * 109.47171 * 59.99963 * 22 13 12 44 44 H 1.08993 * 109.47443 * 299.99842 * 22 13 12 45 45 H 1.08005 * 119.92800 * 0.02867 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.8678 -2.0932 1.3029 6 9 1.3557 -2.7991 0.2710 7 6 2.3267 -2.7511 2.4272 8 6 2.8551 -2.0201 3.4930 9 6 3.3472 -2.7168 4.6987 10 8 3.8072 -2.0776 5.6248 11 7 3.2863 -4.0613 4.7722 12 6 3.7750 -4.7523 5.9680 13 6 3.5927 -6.2615 5.7952 14 9 2.2538 -6.5386 5.4986 15 6 4.4810 -6.7548 4.6512 16 6 4.2983 -8.2639 4.4779 17 6 4.6915 -8.9773 5.7731 18 1 4.5618 -10.0524 5.6495 19 6 6.1557 -8.6747 6.0976 20 8 6.9939 -9.2379 5.0864 21 6 3.8032 -8.4840 6.9170 22 6 3.9863 -6.9744 7.0903 23 6 2.9105 -0.6249 3.4160 24 9 3.4147 0.0906 4.4450 25 6 2.4535 0.0200 2.2814 26 1 -0.3933 0.4417 -0.7651 27 1 1.7924 -0.5138 -0.8900 28 1 1.5614 2.4679 1.2085 29 1 3.5346 1.7703 -0.0320 30 1 2.2769 -3.8285 2.4818 31 1 2.9197 -4.5712 4.0331 32 1 3.2116 -4.4152 6.8381 33 1 4.8322 -4.5283 6.1107 34 1 4.2005 -6.2469 3.7284 35 1 5.5241 -6.5389 4.8823 36 1 4.9314 -8.6154 3.6633 37 1 3.2551 -8.4794 4.2468 38 1 6.3045 -7.5955 6.1335 39 1 6.4109 -9.1090 7.0643 40 1 7.9381 -9.0848 5.2280 41 1 2.7600 -8.6995 6.6858 42 1 4.0836 -8.9919 7.8398 43 1 3.3534 -6.6230 7.9053 44 1 5.0294 -6.7586 7.3214 45 1 2.4999 1.0972 2.2185 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16921692_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:48:40 Heat of formation + Delta-G solvation = -226.660544 kcal Electronic energy + Delta-G solvation = -33178.527321 eV Core-core repulsion = 28133.924414 eV Total energy + Delta-G solvation = -5044.602907 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -50.11214 -50.02750 -48.89580 -41.33704 -40.19503 -39.76433 -37.72500 -37.23970 -36.01278 -33.81911 -32.32685 -32.12031 -31.45471 -28.64356 -27.44109 -25.95449 -24.50271 -24.21165 -23.49515 -22.30704 -21.81493 -19.92257 -19.78761 -18.78168 -18.67956 -18.49672 -18.41414 -17.69867 -17.24646 -17.12959 -17.07514 -16.85210 -16.48434 -16.26099 -16.24662 -16.04212 -15.86872 -15.62792 -15.41444 -15.30044 -15.07101 -14.71838 -14.43521 -14.23524 -13.97455 -13.94056 -13.85303 -13.79402 -13.59170 -13.37393 -13.27970 -13.05019 -12.85970 -12.50156 -12.40470 -12.25249 -12.12803 -11.51550 -11.42586 -11.17927 -11.14098 -10.89493 -10.68670 -10.55706 -10.33620 -9.85003 -5.16365 -0.86492 -0.38404 1.02320 1.34609 1.49836 1.72649 1.76490 2.20856 2.68331 2.76971 2.95309 3.01041 3.12243 3.21408 3.26231 3.34753 3.35602 3.42939 3.58056 3.63422 3.81035 3.81659 3.96051 4.01585 4.13351 4.18279 4.21189 4.23550 4.26287 4.31253 4.41674 4.45257 4.46269 4.54234 4.59368 4.59998 4.66099 4.75395 4.80947 4.94494 5.00245 5.07432 5.14928 5.19790 5.25789 5.30858 6.14672 6.40884 6.58912 6.92150 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.079 4.079 3 Si 0.694 3.306 4 C -0.053 4.053 5 C 0.113 3.887 6 F -0.119 7.119 7 C -0.092 4.092 8 C -0.141 4.141 9 C 0.563 3.437 10 O -0.512 6.512 11 N -0.720 5.720 12 C 0.101 3.899 13 C 0.113 3.887 14 F -0.199 7.199 15 C -0.141 4.141 16 C -0.112 4.112 17 C -0.090 4.090 18 H 0.083 0.917 19 C 0.074 3.926 20 O -0.572 6.572 21 C -0.114 4.114 22 C -0.141 4.141 23 C 0.161 3.839 24 F -0.104 7.104 25 C -0.140 4.140 26 H 0.388 0.612 27 H 0.085 0.915 28 H -0.245 1.245 29 H -0.248 1.248 30 H 0.153 0.847 31 H 0.403 0.597 32 H 0.085 0.915 33 H 0.090 0.910 34 H 0.073 0.927 35 H 0.086 0.914 36 H 0.078 0.922 37 H 0.070 0.930 38 H 0.049 0.951 39 H 0.046 0.954 40 H 0.380 0.620 41 H 0.078 0.922 42 H 0.074 0.926 43 H 0.082 0.918 44 H 0.086 0.914 45 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.041 -0.798 -3.710 3.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.189 4.189 3 Si 0.593 3.407 4 C -0.054 4.054 5 C 0.094 3.906 6 F -0.097 7.097 7 C -0.111 4.111 8 C -0.145 4.145 9 C 0.349 3.651 10 O -0.388 6.388 11 N -0.374 5.374 12 C -0.023 4.023 13 C 0.094 3.906 14 F -0.180 7.180 15 C -0.179 4.179 16 C -0.150 4.150 17 C -0.108 4.108 18 H 0.102 0.898 19 C -0.003 4.003 20 O -0.378 6.378 21 C -0.151 4.151 22 C -0.179 4.179 23 C 0.140 3.860 24 F -0.082 7.082 25 C -0.158 4.158 26 H 0.237 0.763 27 H 0.102 0.898 28 H -0.169 1.169 29 H -0.173 1.173 30 H 0.171 0.829 31 H 0.240 0.760 32 H 0.104 0.896 33 H 0.108 0.892 34 H 0.092 0.908 35 H 0.105 0.895 36 H 0.097 0.903 37 H 0.089 0.911 38 H 0.067 0.933 39 H 0.064 0.936 40 H 0.227 0.773 41 H 0.097 0.903 42 H 0.093 0.907 43 H 0.101 0.899 44 H 0.104 0.896 45 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 1.344 -0.261 -2.276 2.656 hybrid contribution 0.249 -0.676 0.027 0.721 sum 1.593 -0.937 -2.249 2.911 Atomic orbital electron populations 1.86494 1.16133 1.82069 1.49981 1.24679 0.86740 1.11246 0.96249 0.94809 0.81233 0.77182 0.87435 1.19425 0.98392 0.91981 0.95646 1.17163 0.98759 0.88683 0.86023 1.91577 1.84240 1.77955 1.55951 1.21187 0.97495 1.01152 0.91267 1.19809 1.05839 0.92367 0.96482 1.17756 0.79061 0.82085 0.86214 1.90897 1.44224 1.65701 1.37946 1.45701 1.64642 1.06300 1.20733 1.22026 1.01813 0.89912 0.88572 1.21203 0.78409 0.93628 0.97364 1.92877 1.35665 1.94829 1.94620 1.22203 1.00379 0.97734 0.97589 1.21483 1.02378 0.93217 0.97907 1.21146 0.92930 1.01333 0.95426 0.89838 1.22372 0.90641 0.96923 0.90392 1.86474 1.20990 1.80246 1.50092 1.21524 1.00827 0.94243 0.98547 1.22131 1.03517 0.96378 0.95839 1.17415 0.95340 0.87978 0.85221 1.91652 1.83562 1.77118 1.55857 1.20899 1.01685 1.01153 0.92074 0.76298 0.89756 1.16929 1.17256 0.82919 0.76010 0.89644 0.89171 0.90835 0.89542 0.90326 0.91125 0.93279 0.93586 0.77264 0.90328 0.90714 0.89910 0.89577 0.83058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.33 12.86 -35.23 -0.45 -0.12 16 2 C -0.08 0.08 2.43 36.01 0.09 0.17 16 3 Si 0.69 -1.57 30.18 -169.99 -5.13 -6.70 16 4 C -0.05 -0.07 5.30 -104.49 -0.55 -0.62 16 5 C 0.11 0.13 7.23 -39.49 -0.29 -0.15 16 6 F -0.12 -0.20 16.73 2.25 0.04 -0.17 16 7 C -0.09 -0.01 9.52 -39.11 -0.37 -0.38 16 8 C -0.14 -0.29 5.88 -104.92 -0.62 -0.91 16 9 C 0.56 1.69 7.77 -12.40 -0.10 1.60 16 10 O -0.51 -3.41 15.34 5.30 0.08 -3.33 16 11 N -0.72 -0.05 5.12 -61.30 -0.31 -0.36 16 12 C 0.10 -0.06 4.85 -4.05 -0.02 -0.08 16 13 C 0.11 -0.17 0.84 -90.63 -0.08 -0.24 16 14 F -0.20 -0.12 15.42 2.25 0.03 -0.09 16 15 C -0.14 0.27 4.60 -26.73 -0.12 0.15 16 16 C -0.11 0.11 5.23 -26.73 -0.14 -0.03 16 17 C -0.09 0.11 2.90 -90.62 -0.26 -0.15 16 18 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 19 C 0.07 -0.13 5.72 37.16 0.21 0.08 16 20 O -0.57 0.21 13.19 -35.23 -0.46 -0.25 16 21 C -0.11 0.22 5.33 -26.70 -0.14 0.08 16 22 C -0.14 0.33 4.73 -26.71 -0.13 0.20 16 23 C 0.16 0.52 7.28 -38.97 -0.28 0.23 16 24 F -0.10 -0.55 15.55 2.25 0.04 -0.52 16 25 C -0.14 -0.26 8.62 -39.57 -0.34 -0.60 16 26 H 0.39 -2.23 8.74 45.56 0.40 -1.83 16 27 H 0.08 -0.21 7.89 -51.93 -0.41 -0.62 16 28 H -0.24 -0.13 6.74 56.52 0.38 0.26 16 29 H -0.25 -0.04 7.11 56.52 0.40 0.37 16 30 H 0.15 -0.42 6.40 -52.49 -0.34 -0.76 16 31 H 0.40 -0.75 5.49 -40.82 -0.22 -0.98 16 32 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 33 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.07 -0.17 7.18 -51.93 -0.37 -0.54 16 35 H 0.09 -0.20 6.32 -51.93 -0.33 -0.53 16 36 H 0.08 0.00 7.82 -51.93 -0.41 -0.41 16 37 H 0.07 -0.03 7.80 -51.93 -0.41 -0.44 16 38 H 0.05 -0.13 4.83 -51.93 -0.25 -0.39 16 39 H 0.05 -0.10 8.14 -51.93 -0.42 -0.53 16 40 H 0.38 -1.59 9.12 45.56 0.42 -1.18 16 41 H 0.08 -0.08 7.80 -51.93 -0.41 -0.49 16 42 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 43 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 44 H 0.09 -0.30 6.55 -51.93 -0.34 -0.64 16 45 H 0.15 0.16 4.87 -52.48 -0.26 -0.10 16 LS Contribution 366.13 15.07 5.52 5.52 Total: 0.00 -9.59 366.13 -8.47 -18.06 By element: Atomic # 1 Polarization: -6.71 SS G_CDS: -4.67 Total: -11.39 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: -3.14 Total: -0.65 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -0.31 Total: -0.36 kcal Atomic # 8 Polarization: -2.87 SS G_CDS: -0.84 Total: -3.71 kcal Atomic # 9 Polarization: -0.88 SS G_CDS: 0.11 Total: -0.77 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.13 Total: -6.70 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -9.59 -8.47 -18.06 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16921692_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -208.597 kcal (2) G-P(sol) polarization free energy of solvation -9.593 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -218.190 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.471 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.064 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.661 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds