Wall clock time and date at job start Sun Mar 7 2021 10:48:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35652 * 117.00011 * 2 1 4 4 C 1.40139 * 120.14542 * 180.02562 * 3 2 1 5 5 C 1.47532 * 120.19580 * 359.95515 * 4 3 2 6 6 O 1.21593 * 119.99638 * 359.97438 * 5 4 3 7 7 N 1.34776 * 120.00359 * 180.02562 * 5 4 3 8 8 C 1.46495 * 120.00166 * 179.97438 * 7 5 4 9 9 C 1.52996 * 109.47172 * 179.97438 * 8 7 5 10 10 F 1.39901 * 109.47517 * 305.00241 * 9 8 7 11 11 C 1.53002 * 109.46972 * 65.00316 * 9 8 7 12 12 C 1.53006 * 109.46977 * 180.02562 * 11 9 8 13 13 C 1.52997 * 109.47127 * 299.99541 * 12 11 9 14 14 H 1.09002 * 109.47153 * 180.02562 * 13 12 11 15 15 C 1.53000 * 109.47060 * 300.00449 * 13 12 11 16 16 O 1.42905 * 109.46848 * 294.99674 * 15 13 12 17 17 C 1.53002 * 109.46817 * 60.00361 * 13 12 11 18 18 C 1.52996 * 109.46972 * 299.99733 * 17 13 12 19 19 C 1.39712 * 119.61447 * 180.22829 * 4 3 2 20 20 C 1.37793 * 119.90456 * 359.51820 * 19 4 3 21 21 C 1.50703 * 119.84420 * 180.23058 * 20 19 4 22 22 O 1.42901 * 109.47295 * 300.22984 * 21 20 19 23 23 Si 1.86304 * 109.46647 * 180.23251 * 21 20 19 24 24 C 1.38544 * 120.30289 * 0.46237 * 20 19 4 25 25 C 1.38057 * 120.38687 * 359.78767 * 24 20 19 26 26 H 1.09001 * 109.47085 * 59.99250 * 1 2 3 27 27 H 1.08996 * 109.47474 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.46960 * 300.00125 * 1 2 3 29 29 H 0.97003 * 119.99697 * 359.97438 * 7 5 4 30 30 H 1.09007 * 109.47365 * 59.99977 * 8 7 5 31 31 H 1.09000 * 109.47236 * 300.00023 * 8 7 5 32 32 H 1.09000 * 109.46986 * 299.99742 * 11 9 8 33 33 H 1.08993 * 109.47662 * 59.99965 * 11 9 8 34 34 H 1.08998 * 109.46505 * 179.97438 * 12 11 9 35 35 H 1.08996 * 109.46884 * 60.00293 * 12 11 9 36 36 H 1.08990 * 109.47170 * 54.99895 * 15 13 12 37 37 H 1.09001 * 109.46952 * 174.99972 * 15 13 12 38 38 H 0.96698 * 113.99578 * 180.02562 * 16 15 13 39 39 H 1.08996 * 109.47407 * 60.00219 * 17 13 12 40 40 H 1.09000 * 109.46986 * 179.97438 * 17 13 12 41 41 H 1.09001 * 109.46993 * 180.02562 * 18 17 13 42 42 H 1.09004 * 109.47298 * 300.00176 * 18 17 13 43 43 H 1.08001 * 120.04505 * 179.72027 * 19 4 3 44 44 H 1.08999 * 109.47086 * 60.23503 * 21 20 19 45 45 H 0.96695 * 113.99914 * 300.00673 * 22 21 20 46 46 H 1.48501 * 109.99872 * 180.02562 * 23 21 20 47 47 H 1.48503 * 110.00051 * 301.31688 * 23 21 20 48 48 H 1.07998 * 119.80223 * 179.77199 * 24 20 19 49 49 H 1.08006 * 119.95460 * 179.97438 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4442 1.2856 -0.0005 5 6 4.2550 0.0531 -0.0001 6 8 3.7094 -1.0336 0.0012 7 7 5.6005 0.1315 -0.0001 8 6 6.4056 -1.0923 0.0009 9 6 7.8910 -0.7257 0.0000 10 9 8.1621 0.1196 -1.0814 11 6 8.2404 -0.0103 1.3066 12 6 9.7258 0.3570 1.3054 13 6 10.5657 -0.9157 1.1805 14 1 11.6239 -0.6540 1.1801 15 6 10.2698 -1.8402 2.3631 16 8 10.7039 -1.2182 3.5742 17 6 10.2163 -1.6310 -0.1261 18 6 8.7311 -1.9983 -0.1250 19 6 4.0669 2.5362 0.0043 20 6 3.3039 3.6836 -0.0005 21 6 3.9770 5.0319 -0.0005 22 8 4.7925 5.1572 1.1662 23 14 2.6828 6.3720 -0.0004 24 6 1.9208 3.6033 -0.0004 25 6 1.2926 2.3739 0.0000 26 1 -0.3633 0.5140 -0.8899 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 6.0357 0.9984 -0.0008 30 1 6.1761 -1.6791 -0.8887 31 1 6.1760 -1.6776 0.8913 32 1 7.6424 0.8966 1.3954 33 1 8.0293 -0.6687 2.1491 34 1 9.9745 0.8670 2.2361 35 1 9.9365 1.0157 0.4630 36 1 9.1979 -2.0304 2.4162 37 1 10.7999 -2.7831 2.2286 38 1 10.5476 -1.7493 4.3670 39 1 10.4271 -0.9724 -0.9686 40 1 10.8150 -2.5375 -0.2154 41 1 8.4822 -2.5083 -1.0556 42 1 8.5203 -2.6570 0.7176 43 1 5.1448 2.6036 0.0085 44 1 4.5989 5.1275 -0.8905 45 1 4.3041 5.0821 1.9974 46 1 3.3337 7.7067 -0.0010 47 1 1.8081 6.2335 -1.1925 48 1 1.3306 4.5078 -0.0004 49 1 0.2139 2.3195 0.0005 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16921692_12496546.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:48:44 Heat of formation + Delta-G solvation = -177.638672 kcal Electronic energy + Delta-G solvation = -32883.357904 eV Core-core repulsion = 28305.568884 eV Total energy + Delta-G solvation = -4577.789019 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -48.78007 -41.72580 -40.25493 -39.73421 -39.20787 -37.19628 -37.10925 -35.74157 -33.18532 -32.10051 -32.00553 -31.74069 -28.70337 -27.95485 -26.21668 -26.13124 -24.82330 -23.97235 -22.70077 -22.04754 -21.33496 -19.79523 -19.61767 -18.49862 -18.42163 -18.14979 -17.47264 -17.16371 -16.90632 -16.75294 -16.69598 -16.29550 -16.10378 -15.99624 -15.89727 -15.78755 -15.50294 -15.13270 -14.66127 -14.61622 -14.58405 -14.31900 -14.13512 -13.89285 -13.77650 -13.64667 -13.40111 -13.22246 -13.20855 -13.17491 -12.75655 -12.45794 -12.38960 -12.16588 -12.13958 -12.11178 -11.82243 -11.43145 -11.30041 -11.08294 -10.87465 -10.81587 -10.44613 -10.25755 -10.03872 -9.28234 -5.11403 -0.26080 0.18725 1.22064 1.55296 1.86075 1.91807 2.07881 2.20942 2.72610 3.11709 3.23953 3.35758 3.37069 3.46250 3.49053 3.52850 3.60192 3.66096 3.87909 3.90349 3.95510 4.06587 4.10186 4.18752 4.18941 4.21975 4.31943 4.32352 4.34532 4.41242 4.47762 4.51822 4.55942 4.56567 4.59908 4.67389 4.70709 4.83943 4.87956 4.91150 5.02878 5.05350 5.09013 5.22424 5.23233 5.26197 5.33109 5.38737 5.49321 6.26894 6.50265 6.50649 6.64734 7.30810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.174 4.174 5 C 0.563 3.437 6 O -0.515 6.515 7 N -0.728 5.728 8 C 0.103 3.897 9 C 0.113 3.887 10 F -0.200 7.200 11 C -0.140 4.140 12 C -0.112 4.112 13 C -0.090 4.090 14 H 0.082 0.918 15 C 0.074 3.926 16 O -0.572 6.572 17 C -0.114 4.114 18 C -0.141 4.141 19 C -0.019 4.019 20 C -0.168 4.168 21 C -0.063 4.063 22 O -0.540 6.540 23 Si 0.687 3.313 24 C -0.047 4.047 25 C -0.214 4.214 26 H 0.058 0.942 27 H 0.105 0.895 28 H 0.059 0.941 29 H 0.401 0.599 30 H 0.081 0.919 31 H 0.086 0.914 32 H 0.074 0.926 33 H 0.085 0.915 34 H 0.078 0.922 35 H 0.069 0.931 36 H 0.050 0.950 37 H 0.045 0.955 38 H 0.380 0.620 39 H 0.077 0.923 40 H 0.073 0.927 41 H 0.081 0.919 42 H 0.085 0.915 43 H 0.135 0.865 44 H 0.115 0.885 45 H 0.379 0.621 46 H -0.253 1.253 47 H -0.257 1.257 48 H 0.134 0.866 49 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.193 0.420 3.060 3.787 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.190 6.190 3 C 0.144 3.856 4 C -0.178 4.178 5 C 0.351 3.649 6 O -0.391 6.391 7 N -0.382 5.382 8 C -0.021 4.021 9 C 0.094 3.906 10 F -0.181 7.181 11 C -0.178 4.178 12 C -0.149 4.149 13 C -0.108 4.108 14 H 0.101 0.899 15 C -0.003 4.003 16 O -0.378 6.378 17 C -0.151 4.151 18 C -0.179 4.179 19 C -0.038 4.038 20 C -0.169 4.169 21 C -0.174 4.174 22 O -0.345 6.345 23 Si 0.589 3.411 24 C -0.065 4.065 25 C -0.232 4.232 26 H 0.077 0.923 27 H 0.123 0.877 28 H 0.078 0.922 29 H 0.238 0.762 30 H 0.099 0.901 31 H 0.105 0.895 32 H 0.093 0.907 33 H 0.104 0.896 34 H 0.096 0.904 35 H 0.088 0.912 36 H 0.068 0.932 37 H 0.063 0.937 38 H 0.227 0.773 39 H 0.096 0.904 40 H 0.092 0.908 41 H 0.100 0.900 42 H 0.104 0.896 43 H 0.153 0.847 44 H 0.132 0.868 45 H 0.227 0.773 46 H -0.178 1.178 47 H -0.182 1.182 48 H 0.151 0.849 49 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.205 0.659 1.731 2.880 hybrid contribution 0.110 -0.277 -0.117 0.320 sum -2.095 0.382 1.614 2.672 Atomic orbital electron populations 1.23237 0.78173 1.04758 1.01466 1.86381 1.21212 1.25193 1.86193 1.19075 0.90883 0.85079 0.90544 1.19290 0.90868 0.93781 1.13869 1.17923 0.81575 0.88775 0.76665 1.90850 1.71469 1.28575 1.48229 1.45754 1.06007 1.09645 1.76807 1.21921 0.88227 0.87754 1.04208 1.21197 0.94005 0.90306 0.85059 1.92867 1.94958 1.72987 1.57292 1.22187 0.98174 1.01443 0.95997 1.21476 0.93002 0.97240 1.03228 1.21143 1.01136 0.95453 0.93084 0.89924 1.22369 0.98118 0.94999 0.84822 1.86476 1.85946 1.48635 1.16712 1.21511 0.94911 1.01214 0.97498 1.22120 0.95623 0.95858 1.04255 1.20976 0.99929 0.89867 0.93025 1.20130 0.93532 0.96039 1.07185 1.24976 1.01868 0.99200 0.91328 1.86507 1.37267 1.95367 1.15392 0.94826 0.80160 0.77661 0.88491 1.20999 0.93639 0.97352 0.94502 1.21230 1.00745 0.91544 1.09711 0.92344 0.87667 0.92230 0.76246 0.90102 0.89549 0.90703 0.89648 0.90372 0.91202 0.93230 0.93650 0.77315 0.90397 0.90809 0.90023 0.89643 0.84728 0.86757 0.77322 1.17801 1.18246 0.84866 0.84095 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -1.00 8.57 -40.53 -0.35 -1.34 16 3 C 0.19 0.48 6.70 -38.70 -0.26 0.22 16 4 C -0.17 -0.45 5.89 -104.84 -0.62 -1.06 16 5 C 0.56 2.28 7.76 -12.47 -0.10 2.18 16 6 O -0.52 -3.90 15.16 -16.59 -0.25 -4.15 16 7 N -0.73 -0.95 5.12 -61.35 -0.31 -1.26 16 8 C 0.10 0.06 4.85 -4.05 -0.02 0.04 16 9 C 0.11 -0.06 0.84 -90.62 -0.08 -0.14 16 10 F -0.20 -0.33 15.42 2.25 0.03 -0.30 16 11 C -0.14 0.13 4.60 -26.73 -0.12 0.01 16 12 C -0.11 0.02 5.22 -26.73 -0.14 -0.12 16 13 C -0.09 0.05 2.90 -90.62 -0.26 -0.21 16 14 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 15 C 0.07 -0.09 5.72 37.16 0.21 0.12 16 16 O -0.57 -0.04 13.20 -35.23 -0.46 -0.51 16 17 C -0.11 0.15 5.33 -26.73 -0.14 0.01 16 18 C -0.14 0.22 4.73 -26.73 -0.13 0.10 16 19 C -0.02 -0.01 9.08 -39.19 -0.36 -0.36 16 20 C -0.17 0.09 5.39 -104.67 -0.56 -0.48 16 21 C -0.06 0.07 2.82 36.01 0.10 0.17 16 22 O -0.54 0.45 12.76 -35.23 -0.45 0.00 16 23 Si 0.69 -1.26 29.77 -169.99 -5.06 -6.32 16 24 C -0.05 0.05 8.66 -39.54 -0.34 -0.29 16 25 C -0.21 0.05 9.03 -39.48 -0.36 -0.31 16 26 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 27 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 29 H 0.40 -0.10 5.49 -40.82 -0.22 -0.33 16 30 H 0.08 0.12 8.14 -51.93 -0.42 -0.31 16 31 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.07 -0.08 7.18 -51.93 -0.37 -0.45 16 33 H 0.09 -0.12 6.32 -51.93 -0.33 -0.45 16 34 H 0.08 0.06 7.82 -51.93 -0.41 -0.35 16 35 H 0.07 0.03 7.80 -51.93 -0.41 -0.37 16 36 H 0.05 -0.11 4.83 -51.93 -0.25 -0.36 16 37 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 38 H 0.38 -1.44 9.12 45.56 0.42 -1.03 16 39 H 0.08 -0.03 7.80 -51.93 -0.41 -0.44 16 40 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 42 H 0.09 -0.23 6.54 -51.93 -0.34 -0.57 16 43 H 0.14 -0.12 6.40 -52.49 -0.34 -0.46 16 44 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 45 H 0.38 -1.71 8.70 45.56 0.40 -1.32 16 46 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 47 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 48 H 0.13 -0.44 4.85 -52.49 -0.25 -0.69 16 49 H 0.14 -0.36 6.30 -52.48 -0.33 -0.69 16 LS Contribution 382.96 15.07 5.77 5.77 Total: 0.00 -9.94 382.96 -9.47 -19.40 By element: Atomic # 1 Polarization: -5.92 SS G_CDS: -6.21 Total: -12.13 kcal Atomic # 6 Polarization: 3.03 SS G_CDS: -2.18 Total: 0.85 kcal Atomic # 7 Polarization: -0.95 SS G_CDS: -0.31 Total: -1.26 kcal Atomic # 8 Polarization: -4.50 SS G_CDS: -1.51 Total: -6.01 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.03 Total: -0.30 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.06 Total: -6.32 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.94 -9.47 -19.40 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16921692_12496546.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -158.236 kcal (2) G-P(sol) polarization free energy of solvation -9.936 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -168.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.467 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.403 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds