Wall clock time and date at job start Sun Mar 7 2021 10:49:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38500 * 119.80741 * 119.99798 * 4 2 1 6 6 C 1.37827 * 120.30370 * 179.97438 * 5 4 2 7 7 C 1.39671 * 119.90613 * 359.97438 * 6 5 4 8 8 C 1.47533 * 120.19417 * 179.97438 * 7 6 5 9 9 O 1.21587 * 120.00279 * 179.97438 * 8 7 6 10 10 N 1.34777 * 119.99966 * 0.02562 * 8 7 6 11 11 C 1.46501 * 120.00407 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47147 * 179.97438 * 11 10 8 13 13 F 1.39901 * 109.47130 * 60.00378 * 12 11 10 14 14 C 1.52999 * 109.47045 * 179.97438 * 12 11 10 15 15 C 1.53006 * 109.47020 * 60.00174 * 14 12 11 16 16 C 1.52992 * 109.47202 * 60.00051 * 15 14 12 17 17 H 1.09002 * 109.47057 * 59.99860 * 16 15 14 18 18 C 1.53004 * 109.47478 * 180.02562 * 16 15 14 19 19 O 1.42897 * 109.47254 * 185.00226 * 18 16 15 20 20 C 1.52999 * 109.47091 * 299.99905 * 16 15 14 21 21 C 1.53000 * 109.47428 * 299.99721 * 12 11 10 22 22 C 1.40175 * 119.61660 * 359.97438 * 7 6 5 23 23 O 1.35657 * 120.15200 * 180.02562 * 22 7 6 24 24 C 1.38099 * 119.80305 * 299.72793 * 4 2 1 25 25 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 26 26 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 27 27 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 28 28 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 29 29 H 1.08005 * 119.84954 * 359.95949 * 5 4 2 30 30 H 1.08000 * 120.05086 * 180.02562 * 6 5 4 31 31 H 0.97002 * 119.99707 * 359.97438 * 10 8 7 32 32 H 1.08993 * 109.46755 * 299.99721 * 11 10 8 33 33 H 1.09006 * 109.46791 * 59.99466 * 11 10 8 34 34 H 1.08994 * 109.47268 * 179.97438 * 14 12 11 35 35 H 1.08999 * 109.47273 * 300.00692 * 14 12 11 36 36 H 1.08999 * 109.47319 * 180.02562 * 15 14 12 37 37 H 1.09002 * 109.47229 * 300.00017 * 15 14 12 38 38 H 1.09001 * 109.46580 * 305.00098 * 18 16 15 39 39 H 1.09001 * 109.47127 * 64.99541 * 18 16 15 40 40 H 0.96698 * 113.99819 * 179.97438 * 19 18 16 41 41 H 1.08999 * 109.47283 * 180.02562 * 20 16 15 42 42 H 1.08995 * 109.47769 * 300.00043 * 20 16 15 43 43 H 1.08999 * 109.46787 * 60.00398 * 21 12 11 44 44 H 1.09002 * 109.47180 * 179.97438 * 21 12 11 45 45 H 0.96691 * 113.99764 * 90.00142 * 23 22 7 46 46 H 1.08004 * 119.96001 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7273 -0.0335 -2.1396 6 6 3.1928 -0.6734 -3.2681 7 6 2.8614 -2.0108 -3.4969 8 6 3.3557 -2.7018 -4.7030 9 8 3.0655 -3.8662 -4.8985 10 7 4.1299 -2.0426 -5.5877 11 6 4.6212 -2.7288 -6.7851 12 6 5.4691 -1.7626 -7.6148 13 9 6.5554 -1.3218 -6.8513 14 6 5.9828 -2.4795 -8.8651 15 6 4.7952 -2.9622 -9.7004 16 6 3.9420 -1.7620 -10.1151 17 1 4.5461 -1.0736 -10.7062 18 6 2.7540 -2.2447 -10.9498 19 8 2.0227 -1.1167 -11.4345 20 6 3.4283 -1.0451 -8.8648 21 6 4.6160 -0.5620 -8.0291 22 6 2.0565 -2.6927 -2.5739 23 8 1.7284 -3.9920 -2.7851 24 6 1.5999 -2.0342 -1.4422 25 1 -0.3932 0.4418 0.7651 26 1 1.7924 -0.5139 0.8900 27 1 1.5615 2.4679 -1.2085 28 1 1.5881 2.4585 1.2242 29 1 2.9842 1.0007 -1.9635 30 1 3.8135 -0.1417 -3.9740 31 1 4.3617 -1.1137 -5.4315 32 1 5.2287 -3.5843 -6.4900 33 1 3.7749 -3.0720 -7.3802 34 1 6.5865 -1.7911 -9.4564 35 1 6.5906 -3.3347 -8.5696 36 1 5.1611 -3.4734 -10.5908 37 1 4.1911 -3.6505 -9.1092 38 1 3.1174 -2.8318 -11.7932 39 1 2.1023 -2.8619 -10.3314 40 1 1.2541 -1.3484 -11.9734 41 1 2.8200 -0.1902 -9.1603 42 1 2.8242 -1.7333 -8.2737 43 1 4.2505 -0.0514 -7.1382 44 1 5.2203 0.1265 -8.6199 45 1 2.3549 -4.6226 -2.4046 46 1 0.9826 -2.5568 -0.7263 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16921692_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:49:55 Heat of formation + Delta-G solvation = -188.697138 kcal Electronic energy + Delta-G solvation = -30493.109747 eV Core-core repulsion = 26070.378815 eV Total energy + Delta-G solvation = -4422.730931 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.156 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -48.81459 -41.69417 -40.42592 -39.63282 -38.44784 -37.45741 -37.31455 -35.62810 -33.24079 -32.11735 -31.95824 -31.13725 -28.56190 -27.01568 -25.63902 -24.08441 -23.87030 -23.24478 -22.03991 -21.57328 -20.42510 -19.33618 -18.78250 -18.55582 -18.19160 -17.86740 -17.56521 -16.86863 -16.82049 -16.43539 -16.16551 -16.04537 -15.91346 -15.69346 -15.56226 -15.39513 -15.16901 -14.70624 -14.37417 -14.23637 -14.09954 -14.06438 -13.96073 -13.65947 -13.33052 -13.28376 -13.07676 -13.03669 -12.59447 -12.45932 -12.22919 -12.16339 -12.13968 -11.68330 -11.54296 -11.32916 -11.11552 -10.96089 -10.82914 -10.62612 -10.30781 -10.02203 -9.79860 -4.91980 -0.44634 0.12702 1.26106 1.61830 1.66512 1.93203 1.96636 2.52439 3.06697 3.18616 3.24569 3.28987 3.34102 3.41704 3.54213 3.62103 3.70045 3.78198 3.83729 3.99905 4.08275 4.20726 4.24633 4.27185 4.31377 4.36935 4.41177 4.46521 4.52331 4.59304 4.63069 4.68338 4.73876 4.77781 4.92277 4.97353 4.99005 5.04992 5.09726 5.10066 5.13114 5.20743 5.23912 5.31531 5.42592 5.56597 6.33030 6.54731 6.70403 6.85982 7.05746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.096 4.096 3 Si 0.774 3.226 4 C -0.034 4.034 5 C -0.133 4.133 6 C -0.055 4.055 7 C -0.182 4.182 8 C 0.559 3.441 9 O -0.559 6.559 10 N -0.713 5.713 11 C 0.100 3.900 12 C 0.116 3.884 13 F -0.213 7.213 14 C -0.132 4.132 15 C -0.112 4.112 16 C -0.090 4.090 17 H 0.078 0.922 18 C 0.075 3.925 19 O -0.594 6.594 20 C -0.106 4.106 21 C -0.136 4.136 22 C 0.155 3.845 23 O -0.496 6.496 24 C -0.140 4.140 25 H 0.398 0.602 26 H 0.103 0.897 27 H -0.293 1.293 28 H -0.287 1.287 29 H 0.161 0.839 30 H 0.164 0.836 31 H 0.411 0.589 32 H 0.072 0.928 33 H 0.091 0.909 34 H 0.088 0.912 35 H 0.086 0.914 36 H 0.088 0.912 37 H 0.071 0.929 38 H 0.057 0.943 39 H 0.047 0.953 40 H 0.395 0.605 41 H 0.069 0.931 42 H 0.060 0.940 43 H 0.081 0.919 44 H 0.085 0.915 45 H 0.408 0.592 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.931 2.962 0.717 4.974 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.204 4.204 3 Si 0.678 3.322 4 C -0.035 4.035 5 C -0.150 4.150 6 C -0.073 4.073 7 C -0.185 4.185 8 C 0.347 3.653 9 O -0.439 6.439 10 N -0.367 5.367 11 C -0.024 4.024 12 C 0.097 3.903 13 F -0.193 7.193 14 C -0.170 4.170 15 C -0.150 4.150 16 C -0.108 4.108 17 H 0.096 0.904 18 C -0.002 4.002 19 O -0.402 6.402 20 C -0.144 4.144 21 C -0.174 4.174 22 C 0.109 3.891 23 O -0.310 6.310 24 C -0.158 4.158 25 H 0.249 0.751 26 H 0.120 0.880 27 H -0.220 1.220 28 H -0.214 1.214 29 H 0.178 0.822 30 H 0.181 0.819 31 H 0.250 0.750 32 H 0.090 0.910 33 H 0.109 0.891 34 H 0.107 0.893 35 H 0.104 0.896 36 H 0.106 0.894 37 H 0.090 0.910 38 H 0.076 0.924 39 H 0.065 0.935 40 H 0.245 0.755 41 H 0.087 0.913 42 H 0.079 0.921 43 H 0.100 0.900 44 H 0.104 0.896 45 H 0.268 0.732 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 3.640 3.183 0.069 4.835 hybrid contribution -1.289 -0.531 0.605 1.519 sum 2.351 2.652 0.674 3.608 Atomic orbital electron populations 1.86552 1.18300 1.80875 1.51216 1.25206 0.84374 1.12564 0.98237 0.94108 0.89995 0.71281 0.76786 1.19630 0.95402 0.93025 0.95431 1.21171 0.99057 1.00959 0.93809 1.21433 0.96991 0.91662 0.97225 1.20407 1.03933 0.96725 0.97454 1.18238 0.78041 0.85951 0.83042 1.90804 1.58488 1.17690 1.76879 1.45718 1.51748 1.16329 1.22865 1.22068 0.98942 0.95316 0.86082 1.21203 0.83560 0.95063 0.90424 1.92874 1.57529 1.91059 1.77872 1.22040 0.98952 1.01627 0.94430 1.21551 0.95711 0.97002 1.00727 1.21204 0.95766 0.97828 0.96021 0.90398 1.22284 0.93095 0.87752 0.97089 1.86415 1.46250 1.34503 1.73061 1.21483 0.96718 1.00695 0.95460 1.22120 0.97286 0.96434 1.01532 1.18694 0.92680 0.85734 0.91979 1.84718 1.52559 1.13253 1.80424 1.21353 1.01644 0.95589 0.97230 0.75137 0.87968 1.21990 1.21446 0.82212 0.81877 0.75033 0.90974 0.89091 0.89305 0.89587 0.89375 0.91012 0.92433 0.93465 0.75528 0.91250 0.92117 0.90029 0.89631 0.73181 0.84470 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.65 12.74 -148.98 -1.90 -2.54 16 2 C -0.10 0.25 2.80 71.24 0.20 0.45 16 3 Si 0.77 -3.75 29.77 68.60 2.04 -1.71 16 4 C -0.03 -0.03 5.43 -19.83 -0.11 -0.13 16 5 C -0.13 0.31 8.64 22.23 0.19 0.50 16 6 C -0.05 0.10 9.54 22.52 0.21 0.32 16 7 C -0.18 -0.83 5.89 -20.01 -0.12 -0.95 16 8 C 0.56 4.02 7.76 86.69 0.67 4.70 16 9 O -0.56 -8.23 15.16 16.92 0.26 -7.97 16 10 N -0.71 -0.72 5.14 -466.28 -2.40 -3.11 16 11 C 0.10 0.06 4.18 86.38 0.36 0.42 16 12 C 0.12 -0.24 1.07 -10.80 -0.01 -0.25 16 13 F -0.21 -0.34 16.67 44.97 0.75 0.41 16 14 C -0.13 0.53 5.19 30.60 0.16 0.69 16 15 C -0.11 0.54 4.93 30.59 0.15 0.69 16 16 C -0.09 0.23 2.43 -10.80 -0.03 0.20 16 17 H 0.08 -0.11 8.14 -2.39 -0.02 -0.13 16 18 C 0.08 -0.16 6.43 71.98 0.46 0.31 16 19 O -0.59 -0.38 13.19 -148.98 -1.97 -2.34 16 20 C -0.11 0.16 4.83 30.61 0.15 0.31 16 21 C -0.14 0.44 5.02 30.61 0.15 0.60 16 22 C 0.16 1.05 6.72 22.84 0.15 1.21 16 23 O -0.50 -4.40 11.58 -68.81 -0.80 -5.19 16 24 C -0.14 -0.58 9.53 22.34 0.21 -0.37 16 25 H 0.40 -2.79 8.74 -74.05 -0.65 -3.43 16 26 H 0.10 -0.69 7.96 -2.38 -0.02 -0.71 16 27 H -0.29 -0.56 7.11 99.48 0.71 0.14 16 28 H -0.29 0.04 7.11 99.48 0.71 0.75 16 29 H 0.16 -1.23 4.85 -2.91 -0.01 -1.24 16 30 H 0.16 -1.41 6.40 -2.91 -0.02 -1.43 16 31 H 0.41 -1.57 5.29 -92.71 -0.49 -2.06 16 32 H 0.07 0.19 8.14 -2.39 -0.02 0.17 16 33 H 0.09 0.12 4.81 -2.38 -0.01 0.11 16 34 H 0.09 -0.41 8.14 -2.39 -0.02 -0.42 16 35 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 36 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 37 H 0.07 -0.29 6.43 -2.39 -0.02 -0.31 16 38 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 39 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 40 H 0.40 -2.75 9.12 -74.06 -0.68 -3.42 16 41 H 0.07 0.07 7.82 -2.39 -0.02 0.05 16 42 H 0.06 0.01 6.43 -2.39 -0.02 -0.01 16 43 H 0.08 -0.40 6.86 -2.39 -0.02 -0.42 16 44 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 45 H 0.41 0.50 9.06 -74.06 -0.67 -0.17 16 46 H 0.14 0.49 8.06 -2.91 -0.02 0.47 16 Total: 0.00 -24.98 365.81 -2.57 -27.55 By element: Atomic # 1 Polarization: -12.39 SS G_CDS: -1.38 Total: -13.76 kcal Atomic # 6 Polarization: 5.87 SS G_CDS: 2.82 Total: 8.68 kcal Atomic # 7 Polarization: -0.72 SS G_CDS: -2.40 Total: -3.11 kcal Atomic # 8 Polarization: -13.65 SS G_CDS: -4.40 Total: -18.05 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.75 Total: 0.41 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: 2.04 Total: -1.71 kcal Total: -24.98 -2.57 -27.55 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16921692_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -161.150 kcal (2) G-P(sol) polarization free energy of solvation -24.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -186.129 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.568 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.547 kcal (6) G-S(sol) free energy of system = (1) + (5) -188.697 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds