Wall clock time and date at job start Sun Mar 7 2021 10:50:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.37870 * 126.45619 * 2 1 4 4 C 1.46680 * 126.23396 * 0.03159 * 3 2 1 5 5 O 1.21693 * 120.00097 * 0.02562 * 4 3 2 6 6 N 1.34777 * 119.99703 * 179.97438 * 4 3 2 7 7 C 1.46499 * 119.99665 * 179.72441 * 6 4 3 8 8 C 1.53004 * 109.47198 * 180.27868 * 7 6 4 9 9 F 1.39892 * 109.47089 * 305.00002 * 8 7 6 10 10 C 1.53004 * 109.47137 * 65.00035 * 8 7 6 11 11 C 1.52996 * 109.47242 * 180.02562 * 10 8 7 12 12 C 1.53006 * 109.46976 * 299.99985 * 11 10 8 13 13 H 1.08996 * 109.46680 * 179.97438 * 12 11 10 14 14 C 1.53002 * 109.47139 * 299.99949 * 12 11 10 15 15 O 1.42905 * 109.46944 * 295.00042 * 14 12 11 16 16 C 1.53004 * 109.47123 * 59.99942 * 12 11 10 17 17 C 1.52998 * 109.47023 * 185.00121 * 8 7 6 18 18 N 1.37650 * 107.53220 * 180.29447 * 3 2 1 19 19 C 1.35531 * 108.64363 * 359.56684 * 18 3 2 20 20 C 1.50699 * 125.56559 * 180.13134 * 19 18 3 21 21 O 1.42901 * 109.47283 * 120.35212 * 20 19 18 22 22 Si 1.86305 * 109.47143 * 0.35436 * 20 19 18 23 23 C 1.35452 * 108.87135 * 0.43755 * 19 18 3 24 24 H 1.08999 * 109.46821 * 90.00103 * 1 2 3 25 25 H 1.08996 * 109.46962 * 210.00568 * 1 2 3 26 26 H 1.09005 * 109.46795 * 330.00242 * 1 2 3 27 27 H 0.97001 * 120.00485 * 0.02562 * 6 4 3 28 28 H 1.09009 * 109.47454 * 300.27637 * 7 6 4 29 29 H 1.08998 * 109.47492 * 60.27932 * 7 6 4 30 30 H 1.09000 * 109.46939 * 300.00085 * 10 8 7 31 31 H 1.09003 * 109.46857 * 59.99834 * 10 8 7 32 32 H 1.08991 * 109.47151 * 179.97438 * 11 10 8 33 33 H 1.08997 * 109.47278 * 59.99660 * 11 10 8 34 34 H 1.08999 * 109.47011 * 54.99763 * 14 12 11 35 35 H 1.08991 * 109.46801 * 175.00059 * 14 12 11 36 36 H 0.96702 * 113.99643 * 179.97438 * 15 14 12 37 37 H 1.09000 * 109.46939 * 180.02562 * 16 12 11 38 38 H 1.09004 * 109.46838 * 59.99735 * 16 12 11 39 39 H 1.09005 * 109.47209 * 299.99293 * 17 8 7 40 40 H 1.08991 * 109.47437 * 59.99960 * 17 8 7 41 41 H 0.96996 * 125.67927 * 179.70037 * 18 3 2 42 42 H 1.08994 * 109.47473 * 240.35315 * 20 19 18 43 43 H 0.96698 * 113.99697 * 300.00406 * 21 20 19 44 44 H 1.48501 * 109.99845 * 58.67889 * 22 20 19 45 45 H 1.48496 * 110.00099 * 179.97438 * 22 20 19 46 46 H 1.08005 * 126.06548 * 179.69762 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5093 0.0007 5 8 0.7027 2.7766 0.0017 6 7 2.8038 3.4999 0.0011 7 6 2.3679 4.8985 -0.0044 8 6 3.5933 5.8146 -0.0096 9 9 4.4210 5.4925 1.0712 10 6 4.3654 5.6262 -1.3171 11 6 5.5911 6.5418 -1.3221 12 6 5.1398 7.9988 -1.2018 13 1 6.0131 8.6510 -1.2049 14 6 4.2347 8.3517 -2.3839 15 8 4.9884 8.2883 -3.5963 16 6 4.3677 8.1873 0.1057 17 6 3.1415 7.2714 0.1104 18 7 3.6284 0.6625 -0.0067 19 6 3.6218 -0.6928 -0.0011 20 6 4.8434 -1.5753 -0.0028 21 8 4.8359 -2.4013 1.1633 22 14 6.3754 -0.5151 -0.0028 23 6 2.3380 -1.1247 -0.0007 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3633 -0.8899 0.5139 26 1 -0.3633 0.8901 0.5138 27 1 3.7501 3.2868 0.0006 28 1 1.7682 5.0888 -0.8946 29 1 1.7702 5.0964 0.8854 30 1 4.6872 4.5883 -1.4026 31 1 3.7204 5.8772 -2.1592 32 1 6.1413 6.4072 -2.2533 33 1 6.2358 6.2905 -0.4800 34 1 3.4079 7.6432 -2.4326 35 1 3.8421 9.3599 -2.2524 36 1 4.4768 8.5004 -4.3890 37 1 4.0458 9.2251 0.1912 38 1 5.0125 7.9358 0.9478 39 1 2.4966 7.5225 -0.7318 40 1 2.5915 7.4057 1.0418 41 1 4.4190 1.2243 -0.0124 42 1 4.8364 -2.2037 -0.8932 43 1 4.8414 -1.9078 1.9949 44 1 6.3810 0.3693 1.1901 45 1 7.5871 -1.3735 -0.0038 46 1 2.0137 -2.1549 -0.0014 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16921692_13940406.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:50:16 Heat of formation + Delta-G solvation = -133.814793 kcal Electronic energy + Delta-G solvation = -29116.145595 eV Core-core repulsion = 24921.739343 eV Total energy + Delta-G solvation = -4194.406252 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.168 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -48.85893 -42.66108 -40.46817 -39.83693 -37.91114 -37.13432 -36.01906 -33.74549 -32.67047 -31.97839 -31.29424 -28.47948 -28.17920 -26.74389 -25.57917 -23.98930 -22.60403 -22.16623 -21.61104 -20.47907 -19.89244 -19.72463 -18.33807 -18.05665 -17.36482 -17.18823 -16.98749 -16.73138 -16.64996 -16.15914 -16.11721 -15.87417 -15.19782 -15.09154 -14.99609 -14.83514 -14.51030 -14.11830 -14.11434 -13.98200 -13.77357 -13.69920 -13.59593 -13.44027 -13.20935 -13.11772 -13.03608 -12.75011 -12.68650 -12.40030 -12.16600 -12.08322 -11.39196 -11.30797 -11.10330 -11.03999 -10.75819 -10.71684 -10.38740 -9.84168 -9.22801 -5.11713 0.23473 1.09186 1.42403 1.54073 1.74925 1.87341 2.01404 2.21059 3.15000 3.28304 3.30469 3.42803 3.50730 3.60017 3.61837 3.73139 3.95454 3.97326 4.11346 4.17958 4.23416 4.31651 4.36939 4.41973 4.50214 4.50708 4.58573 4.61250 4.68403 4.70232 4.75431 4.83356 4.87980 4.92014 4.99137 5.06634 5.10186 5.13937 5.17276 5.28989 5.33909 5.34849 5.39278 5.59980 5.82051 6.19685 6.35848 6.39911 6.92069 6.97648 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C -0.087 4.087 3 C -0.064 4.064 4 C 0.591 3.409 5 O -0.556 6.556 6 N -0.719 5.719 7 C 0.102 3.898 8 C 0.116 3.884 9 F -0.213 7.213 10 C -0.138 4.138 11 C -0.109 4.109 12 C -0.091 4.091 13 H 0.069 0.931 14 C 0.073 3.927 15 O -0.594 6.594 16 C -0.110 4.110 17 C -0.141 4.141 18 N -0.521 5.521 19 C 0.032 3.968 20 C -0.053 4.053 21 O -0.537 6.537 22 Si 0.752 3.248 23 C -0.189 4.189 24 H 0.070 0.930 25 H 0.073 0.927 26 H 0.063 0.937 27 H 0.406 0.594 28 H 0.097 0.903 29 H 0.074 0.926 30 H 0.081 0.919 31 H 0.095 0.905 32 H 0.070 0.930 33 H 0.061 0.939 34 H 0.062 0.938 35 H 0.052 0.948 36 H 0.395 0.605 37 H 0.082 0.918 38 H 0.066 0.934 39 H 0.102 0.898 40 H 0.082 0.918 41 H 0.424 0.576 42 H 0.144 0.856 43 H 0.388 0.612 44 H -0.273 1.273 45 H -0.288 1.288 46 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.208 3.320 -3.331 5.195 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.096 4.096 3 C -0.177 4.177 4 C 0.380 3.620 5 O -0.435 6.435 6 N -0.371 5.371 7 C -0.022 4.022 8 C 0.098 3.902 9 F -0.194 7.194 10 C -0.175 4.175 11 C -0.147 4.147 12 C -0.110 4.110 13 H 0.088 0.912 14 C -0.004 4.004 15 O -0.402 6.402 16 C -0.148 4.148 17 C -0.178 4.178 18 N -0.123 5.123 19 C -0.085 4.085 20 C -0.163 4.163 21 O -0.345 6.345 22 Si 0.655 3.345 23 C -0.213 4.213 24 H 0.088 0.912 25 H 0.092 0.908 26 H 0.082 0.918 27 H 0.242 0.758 28 H 0.115 0.885 29 H 0.092 0.908 30 H 0.100 0.900 31 H 0.113 0.887 32 H 0.088 0.912 33 H 0.080 0.920 34 H 0.080 0.920 35 H 0.070 0.930 36 H 0.244 0.756 37 H 0.100 0.900 38 H 0.085 0.915 39 H 0.120 0.880 40 H 0.101 0.899 41 H 0.266 0.734 42 H 0.162 0.838 43 H 0.238 0.762 44 H -0.199 1.199 45 H -0.215 1.215 46 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.704 3.257 -2.900 5.131 hybrid contribution 0.034 -0.128 1.005 1.014 sum 2.738 3.130 -1.895 4.570 Atomic orbital electron populations 1.20330 0.89215 1.02687 1.02417 1.20227 0.96328 0.91324 1.01715 1.20029 0.84235 0.92976 1.20420 1.17096 0.85486 0.83482 0.75942 1.90827 1.17303 1.83663 1.51701 1.45655 1.09822 1.05921 1.75690 1.22032 0.96344 0.79387 1.04433 1.21263 0.88203 0.95879 0.84865 1.92843 1.74375 1.94062 1.58128 1.22191 0.98043 1.01434 0.95854 1.21420 0.97137 0.93731 1.02387 1.21141 0.98754 0.97261 0.93837 0.91241 1.22412 0.93610 1.00210 0.84146 1.86431 1.42511 1.93565 1.17688 1.21477 0.96295 1.00312 0.96683 1.22163 0.99189 0.91376 1.05115 1.41924 1.06843 1.06443 1.57067 1.20960 0.97691 0.82743 1.07122 1.24786 1.00770 0.98468 0.92238 1.86641 1.95419 1.35901 1.16495 0.94768 0.73711 0.79524 0.86539 1.20759 0.91086 0.99108 1.10379 0.91153 0.90807 0.91831 0.75762 0.88515 0.90805 0.90047 0.88657 0.91162 0.91988 0.91954 0.93022 0.75558 0.89952 0.91528 0.88001 0.89921 0.73432 0.83826 0.76230 1.19880 1.21458 0.83214 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.50 9.83 71.24 0.70 0.20 16 2 C -0.09 -0.49 6.21 -19.56 -0.12 -0.62 16 3 C -0.06 -0.24 7.06 40.35 0.28 0.05 16 4 C 0.59 3.12 7.79 86.45 0.67 3.80 16 5 O -0.56 -6.77 14.80 -4.33 -0.06 -6.84 16 6 N -0.72 0.81 5.17 -467.06 -2.41 -1.60 16 7 C 0.10 -0.24 4.85 86.38 0.42 0.18 16 8 C 0.12 -0.51 0.84 -10.79 -0.01 -0.52 16 9 F -0.21 -0.05 15.42 44.97 0.69 0.64 16 10 C -0.14 0.81 4.60 30.59 0.14 0.95 16 11 C -0.11 0.35 5.23 30.60 0.16 0.51 16 12 C -0.09 0.31 2.90 -10.79 -0.03 0.28 16 13 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 14 C 0.07 -0.37 5.72 71.98 0.41 0.04 16 15 O -0.59 1.25 13.20 -148.98 -1.97 -0.71 16 16 C -0.11 0.53 5.33 30.61 0.16 0.69 16 17 C -0.14 0.85 4.73 30.61 0.14 1.00 16 18 N -0.52 1.23 5.47 -171.93 -0.94 0.28 16 19 C 0.03 -0.03 6.11 41.34 0.25 0.22 16 20 C -0.05 0.20 2.98 71.24 0.21 0.41 16 21 O -0.54 0.11 12.87 -148.98 -1.92 -1.81 16 22 Si 0.75 -4.60 30.96 68.60 2.12 -2.48 16 23 C -0.19 -0.55 10.64 22.01 0.23 -0.32 16 24 H 0.07 0.35 8.14 -2.39 -0.02 0.33 16 25 H 0.07 0.22 8.14 -2.39 -0.02 0.20 16 26 H 0.06 0.59 6.48 -2.38 -0.02 0.57 16 27 H 0.41 -2.22 6.59 -92.71 -0.61 -2.83 16 28 H 0.10 -0.33 8.14 -2.38 -0.02 -0.35 16 29 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 30 H 0.08 -0.61 7.18 -2.39 -0.02 -0.63 16 31 H 0.10 -0.68 6.32 -2.39 -0.02 -0.70 16 32 H 0.07 -0.09 7.82 -2.39 -0.02 -0.11 16 33 H 0.06 -0.11 7.80 -2.39 -0.02 -0.13 16 34 H 0.06 -0.49 4.83 -2.39 -0.01 -0.50 16 35 H 0.05 -0.32 8.14 -2.39 -0.02 -0.34 16 36 H 0.39 -3.86 9.12 -74.06 -0.68 -4.54 16 37 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 38 H 0.07 -0.16 7.80 -2.38 -0.02 -0.18 16 39 H 0.10 -0.92 6.55 -2.38 -0.02 -0.94 16 40 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 41 H 0.42 -3.42 5.98 -92.71 -0.55 -3.98 16 42 H 0.14 -0.86 7.96 -2.39 -0.02 -0.88 16 43 H 0.39 -2.08 8.70 -74.06 -0.64 -2.73 16 44 H -0.27 0.75 7.11 99.48 0.71 1.46 16 45 H -0.29 -0.52 7.11 99.48 0.71 0.19 16 46 H 0.15 0.26 8.06 -2.91 -0.02 0.24 16 Total: 0.00 -20.33 363.23 -2.25 -22.58 By element: Atomic # 1 Polarization: -15.55 SS G_CDS: -1.40 Total: -16.95 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: 3.63 Total: 6.87 kcal Atomic # 7 Polarization: 2.04 SS G_CDS: -3.35 Total: -1.32 kcal Atomic # 8 Polarization: -5.41 SS G_CDS: -3.95 Total: -9.36 kcal Atomic # 9 Polarization: -0.05 SS G_CDS: 0.69 Total: 0.64 kcal Atomic # 14 Polarization: -4.60 SS G_CDS: 2.12 Total: -2.48 kcal Total: -20.33 -2.25 -22.58 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16921692_13940406.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.236 kcal (2) G-P(sol) polarization free energy of solvation -20.329 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.565 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.249 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.579 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.815 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds