Wall clock time and date at job start Sun Mar 7 2021 10:50:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86303 * 109.47205 * 2 1 4 4 C 1.50699 * 109.47091 * 240.00258 * 2 1 3 5 5 C 1.31113 * 118.54906 * 120.01883 * 4 2 1 6 6 N 1.38925 * 121.84806 * 179.56945 * 5 4 2 7 7 C 1.47028 * 118.88333 * 13.31869 * 6 5 4 8 8 C 1.50703 * 109.82276 * 196.79098 * 7 6 5 9 9 O 1.21279 * 119.99449 * 18.21116 * 8 7 6 10 10 N 1.34776 * 120.00531 * 198.20692 * 8 7 6 11 11 C 1.46491 * 120.00144 * 180.02562 * 10 8 7 12 12 C 1.53004 * 109.46906 * 180.02562 * 11 10 8 13 13 F 1.39891 * 109.47714 * 59.99857 * 12 11 10 14 14 C 1.53006 * 109.46961 * 180.02562 * 12 11 10 15 15 C 1.52993 * 109.47172 * 59.99620 * 14 12 11 16 16 C 1.53003 * 109.47495 * 60.00258 * 15 14 12 17 17 H 1.08994 * 109.47229 * 59.99618 * 16 15 14 18 18 C 1.52999 * 109.47015 * 180.02562 * 16 15 14 19 19 O 1.42905 * 109.46728 * 184.99974 * 18 16 15 20 20 C 1.53002 * 109.46755 * 299.99683 * 16 15 14 21 21 C 1.53002 * 109.46918 * 60.00051 * 20 16 15 22 22 C 1.53537 * 107.66195 * 316.33384 * 7 6 5 23 23 C 1.50209 * 118.54558 * 299.99751 * 4 2 1 24 24 H 0.96705 * 113.99516 * 300.00052 * 1 2 3 25 25 H 1.09000 * 109.47373 * 119.99955 * 2 1 3 26 26 H 1.48498 * 109.99917 * 178.68187 * 3 2 1 27 27 H 1.48499 * 109.99859 * 300.00527 * 3 2 1 28 28 H 1.07997 * 119.07613 * 359.59440 * 5 4 2 29 29 H 0.97000 * 120.56020 * 193.33309 * 6 5 4 30 30 H 1.09004 * 109.87684 * 75.90418 * 7 6 5 31 31 H 0.97001 * 119.99695 * 0.02562 * 10 8 7 32 32 H 1.08992 * 109.47364 * 60.00440 * 11 10 8 33 33 H 1.09000 * 109.46878 * 299.99618 * 11 10 8 34 34 H 1.09000 * 109.46739 * 299.99063 * 14 12 11 35 35 H 1.08999 * 109.46595 * 179.97438 * 14 12 11 36 36 H 1.08999 * 109.47626 * 299.99693 * 15 14 12 37 37 H 1.09000 * 109.47115 * 180.02562 * 15 14 12 38 38 H 1.09000 * 109.47486 * 64.99912 * 18 16 15 39 39 H 1.09001 * 109.47362 * 304.99190 * 18 16 15 40 40 H 0.96696 * 114.00036 * 179.97438 * 19 18 16 41 41 H 1.09000 * 109.47048 * 179.97438 * 20 16 15 42 42 H 1.08994 * 109.47199 * 299.99953 * 20 16 15 43 43 H 1.09000 * 109.47173 * 179.97438 * 21 20 16 44 44 H 1.08994 * 109.47265 * 59.99943 * 21 20 16 45 45 H 1.08995 * 109.62848 * 180.67179 * 22 7 6 46 46 H 1.09007 * 109.62191 * 301.04521 * 22 7 6 47 47 H 1.09006 * 109.32609 * 79.81588 * 23 4 2 48 48 H 1.09000 * 109.18697 * 320.24794 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.6834 -0.0460 -2.0744 6 7 3.1907 -0.6357 -3.2254 7 6 2.6462 -1.9308 -3.6590 8 6 3.5831 -2.5733 -4.6493 9 8 4.7344 -2.1998 -4.7252 10 7 3.1415 -3.5630 -5.4506 11 6 4.0524 -4.1878 -6.4128 12 6 3.3057 -5.2728 -7.1915 13 9 2.2281 -4.6988 -7.8744 14 6 4.2573 -5.9258 -8.1961 15 6 5.4354 -6.5537 -7.4487 16 6 4.9156 -7.6136 -6.4754 17 1 4.3837 -8.3865 -7.0301 18 6 6.0938 -8.2410 -5.7277 19 8 5.6211 -9.3096 -4.9050 20 6 3.9641 -6.9606 -5.4708 21 6 2.7859 -6.3327 -6.2182 22 6 2.5138 -2.8206 -2.4148 23 6 1.5486 -2.1483 -1.4357 24 1 -0.3933 0.4417 0.7651 25 1 1.7924 -0.5138 0.8900 26 1 3.5346 1.7703 0.0321 27 1 1.5614 2.4679 -1.2084 28 1 2.9154 0.9885 -1.8687 29 1 3.8924 -0.2005 -3.7344 30 1 1.6673 -1.7869 -4.1164 31 1 2.2206 -3.8615 -5.3902 32 1 4.8921 -4.6347 -5.8809 33 1 4.4220 -3.4326 -7.1065 34 1 4.6276 -5.1708 -8.8895 35 1 3.7254 -6.6991 -8.7504 36 1 5.9674 -5.7808 -6.8941 37 1 6.1135 -7.0185 -8.1644 38 1 6.5716 -7.4858 -5.1035 39 1 6.8158 -8.6281 -6.4466 40 1 6.3158 -9.7546 -4.4007 41 1 3.5934 -7.7157 -4.7777 42 1 4.4960 -6.1876 -4.9162 43 1 2.1078 -5.8678 -5.5025 44 1 2.2540 -7.1056 -6.7729 45 1 2.1226 -3.7964 -2.7024 46 1 3.4902 -2.9414 -1.9456 47 1 0.5358 -2.1985 -1.8356 48 1 1.5849 -2.6687 -0.4786 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16921692_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:50:22 Heat of formation + Delta-G solvation = -157.437348 kcal Electronic energy + Delta-G solvation = -29668.062045 eV Core-core repulsion = 25445.319964 eV Total energy + Delta-G solvation = -4222.742081 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.184 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -48.87177 -41.58655 -40.26002 -39.44784 -37.54542 -37.33049 -35.78461 -33.44483 -33.34655 -32.25751 -32.01291 -28.76711 -26.99665 -25.70395 -25.33658 -24.09217 -23.59176 -22.07132 -21.82804 -20.42152 -19.29181 -19.20923 -18.24555 -18.21409 -17.87872 -17.72228 -17.40007 -16.62438 -16.28094 -16.13964 -15.94519 -15.69330 -15.59933 -15.46701 -15.01379 -14.80615 -14.68009 -14.46167 -14.34073 -14.25873 -13.98306 -13.79971 -13.70365 -13.55803 -13.31970 -13.06286 -12.97912 -12.62986 -12.46657 -12.24472 -12.18261 -12.08397 -11.70821 -11.56569 -11.44135 -11.36510 -11.14965 -11.02631 -10.84130 -10.35196 -10.10823 -8.61692 -4.92788 1.13710 1.28087 1.39606 1.63133 1.69238 1.97199 2.44382 3.14994 3.20656 3.29246 3.37987 3.40680 3.51132 3.58782 3.64937 3.81210 3.85479 3.93066 3.96672 4.13648 4.17478 4.25054 4.30221 4.34417 4.38331 4.42210 4.48794 4.53418 4.58523 4.59555 4.66450 4.68689 4.75082 4.88726 4.91078 4.93943 5.02209 5.06053 5.09344 5.10603 5.14305 5.16621 5.29562 5.39871 5.43008 6.04673 6.24037 6.59838 6.85822 6.89983 7.02966 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.051 4.051 3 Si 0.754 3.246 4 C -0.241 4.241 5 C 0.114 3.886 6 N -0.740 5.740 7 C 0.137 3.863 8 C 0.518 3.482 9 O -0.569 6.569 10 N -0.709 5.709 11 C 0.099 3.901 12 C 0.115 3.885 13 F -0.215 7.215 14 C -0.133 4.133 15 C -0.112 4.112 16 C -0.091 4.091 17 H 0.076 0.924 18 C 0.076 3.924 19 O -0.594 6.594 20 C -0.104 4.104 21 C -0.136 4.136 22 C -0.121 4.121 23 C -0.050 4.050 24 H 0.397 0.603 25 H 0.082 0.918 26 H -0.295 1.295 27 H -0.301 1.301 28 H 0.116 0.884 29 H 0.405 0.595 30 H 0.105 0.895 31 H 0.415 0.585 32 H 0.096 0.904 33 H 0.069 0.931 34 H 0.083 0.917 35 H 0.087 0.913 36 H 0.072 0.928 37 H 0.087 0.913 38 H 0.049 0.951 39 H 0.056 0.944 40 H 0.396 0.604 41 H 0.071 0.929 42 H 0.064 0.936 43 H 0.083 0.917 44 H 0.082 0.918 45 H 0.105 0.895 46 H 0.062 0.938 47 H 0.073 0.927 48 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.652 -3.127 2.561 4.094 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.163 4.163 3 Si 0.663 3.337 4 C -0.251 4.251 5 C -0.006 4.006 6 N -0.373 5.373 7 C 0.029 3.971 8 C 0.304 3.696 9 O -0.448 6.448 10 N -0.362 5.362 11 C -0.025 4.025 12 C 0.096 3.904 13 F -0.196 7.196 14 C -0.172 4.172 15 C -0.149 4.149 16 C -0.109 4.109 17 H 0.094 0.906 18 C -0.001 4.001 19 O -0.402 6.402 20 C -0.142 4.142 21 C -0.174 4.174 22 C -0.160 4.160 23 C -0.087 4.087 24 H 0.247 0.753 25 H 0.100 0.900 26 H -0.223 1.223 27 H -0.229 1.229 28 H 0.133 0.867 29 H 0.241 0.759 30 H 0.123 0.877 31 H 0.253 0.747 32 H 0.114 0.886 33 H 0.087 0.913 34 H 0.102 0.898 35 H 0.105 0.895 36 H 0.091 0.909 37 H 0.105 0.895 38 H 0.067 0.933 39 H 0.074 0.926 40 H 0.245 0.755 41 H 0.090 0.910 42 H 0.083 0.917 43 H 0.102 0.898 44 H 0.101 0.899 45 H 0.123 0.877 46 H 0.081 0.919 47 H 0.092 0.908 48 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.060 -2.511 1.225 2.794 hybrid contribution 0.630 -0.251 -0.429 0.802 sum 0.691 -2.761 0.797 2.956 Atomic orbital electron populations 1.86444 1.17884 1.82157 1.50965 1.24510 0.85286 1.08888 0.97618 0.94689 0.77064 0.77021 0.84950 1.20522 1.08664 0.97655 0.98277 1.20194 0.97809 0.95022 0.87565 1.44266 1.43950 1.21574 1.27475 1.21105 0.96088 0.85195 0.94758 1.20722 0.88170 0.79693 0.81046 1.90717 1.20234 1.63622 1.70226 1.45745 1.15771 1.36999 1.37668 1.22087 0.93491 0.95112 0.91803 1.21235 0.84525 0.92307 0.92320 1.92874 1.58286 1.86511 1.81924 1.22044 0.96448 1.01324 0.97337 1.21543 0.97157 0.97976 0.98245 1.21207 0.96067 0.97449 0.96186 0.90582 1.22269 0.95684 0.88962 0.93231 1.86418 1.40460 1.50417 1.62905 1.21474 0.95354 0.99772 0.97592 1.22114 0.99137 0.97786 0.98325 1.21878 1.01026 0.98827 0.94222 1.19959 0.98336 0.90822 0.99550 0.75258 0.90041 1.22325 1.22926 0.86680 0.75931 0.87734 0.74700 0.88618 0.91269 0.89808 0.89456 0.90897 0.89490 0.93253 0.92604 0.75488 0.91009 0.91730 0.89819 0.89917 0.87651 0.91886 0.90829 0.89910 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -0.36 12.76 -148.98 -1.90 -2.26 16 2 C -0.05 -0.04 2.82 71.24 0.20 0.16 16 3 Si 0.75 0.06 29.68 68.60 2.04 2.10 16 4 C -0.24 -1.19 5.48 -16.75 -0.09 -1.28 16 5 C 0.11 0.78 9.63 83.42 0.80 1.58 16 6 N -0.74 -4.54 5.47 -329.01 -1.80 -6.33 16 7 C 0.14 0.29 3.36 44.33 0.15 0.43 16 8 C 0.52 2.10 7.10 87.66 0.62 2.73 16 9 O -0.57 -6.76 16.06 -3.03 -0.05 -6.81 16 10 N -0.71 0.72 5.19 -463.08 -2.40 -1.68 16 11 C 0.10 -0.07 4.18 86.38 0.36 0.29 16 12 C 0.11 -0.28 1.08 -10.79 -0.01 -0.29 16 13 F -0.22 -0.47 16.67 44.97 0.75 0.28 16 14 C -0.13 0.56 5.19 30.59 0.16 0.72 16 15 C -0.11 0.61 4.93 30.59 0.15 0.77 16 16 C -0.09 0.33 2.43 -10.79 -0.03 0.30 16 17 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 18 C 0.08 -0.26 6.43 71.98 0.46 0.21 16 19 O -0.59 0.41 13.19 -148.98 -1.97 -1.56 16 20 C -0.10 0.34 4.82 30.60 0.15 0.49 16 21 C -0.14 0.56 5.01 30.60 0.15 0.72 16 22 C -0.12 0.02 5.47 30.79 0.17 0.18 16 23 C -0.05 -0.08 5.75 29.71 0.17 0.09 16 24 H 0.40 -3.72 8.74 -74.05 -0.65 -4.36 16 25 H 0.08 -0.20 7.96 -2.39 -0.02 -0.22 16 26 H -0.30 -1.79 7.11 99.48 0.71 -1.09 16 27 H -0.30 -2.35 7.11 99.48 0.71 -1.64 16 28 H 0.12 0.81 4.37 -2.91 -0.01 0.79 16 29 H 0.40 2.83 8.08 -92.71 -0.75 2.08 16 30 H 0.11 -0.06 8.14 -2.39 -0.02 -0.08 16 31 H 0.42 -2.14 7.26 -92.71 -0.67 -2.82 16 32 H 0.10 -0.07 4.81 -2.39 -0.01 -0.08 16 33 H 0.07 0.14 8.14 -2.39 -0.02 0.12 16 34 H 0.08 -0.36 8.14 -2.39 -0.02 -0.37 16 35 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 36 H 0.07 -0.38 6.43 -2.39 -0.02 -0.40 16 37 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 38 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 39 H 0.06 -0.29 8.14 -2.39 -0.02 -0.31 16 40 H 0.40 -3.27 9.12 -74.06 -0.68 -3.94 16 41 H 0.07 -0.06 7.82 -2.39 -0.02 -0.08 16 42 H 0.06 -0.17 6.43 -2.39 -0.02 -0.18 16 43 H 0.08 -0.50 6.86 -2.39 -0.02 -0.51 16 44 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 45 H 0.11 -0.56 8.14 -2.39 -0.02 -0.58 16 46 H 0.06 0.20 8.14 -2.38 -0.02 0.18 16 47 H 0.07 0.12 8.14 -2.38 -0.02 0.10 16 48 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 Total: 0.00 -20.70 370.62 -3.60 -24.31 By element: Atomic # 1 Polarization: -13.43 SS G_CDS: -1.69 Total: -15.13 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: 3.42 Total: 7.08 kcal Atomic # 7 Polarization: -3.82 SS G_CDS: -4.20 Total: -8.02 kcal Atomic # 8 Polarization: -6.71 SS G_CDS: -3.92 Total: -10.63 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.75 Total: 0.28 kcal Atomic # 14 Polarization: 0.06 SS G_CDS: 2.04 Total: 2.10 kcal Total: -20.70 -3.60 -24.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16921692_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.129 kcal (2) G-P(sol) polarization free energy of solvation -20.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.833 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.605 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.308 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.437 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds