Wall clock time and date at job start Sun Mar 7 2021 10:52:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86302 * 109.46938 * 2 1 4 4 C 1.50696 * 109.46946 * 119.99869 * 2 1 3 5 5 C 1.34241 * 126.49889 * 254.97804 * 4 2 1 6 6 N 1.36831 * 109.93666 * 180.02562 * 5 4 2 7 7 C 1.46506 * 125.06031 * 179.97438 * 6 5 4 8 8 C 1.50701 * 109.47042 * 265.02641 * 7 6 5 9 9 O 1.21281 * 120.00126 * 0.02562 * 8 7 6 10 10 N 1.34776 * 119.99721 * 180.02562 * 8 7 6 11 11 C 1.46492 * 119.99973 * 179.97438 * 10 8 7 12 12 C 1.53007 * 109.47439 * 179.97438 * 11 10 8 13 13 F 1.39899 * 109.46556 * 60.00157 * 12 11 10 14 14 C 1.52999 * 109.47306 * 180.02562 * 12 11 10 15 15 C 1.52999 * 109.47067 * 60.00208 * 14 12 11 16 16 C 1.53008 * 109.46978 * 60.00078 * 15 14 12 17 17 H 1.09002 * 109.46892 * 59.99691 * 16 15 14 18 18 C 1.52999 * 109.46978 * 179.97438 * 16 15 14 19 19 O 1.42897 * 109.47344 * 185.00016 * 18 16 15 20 20 C 1.53003 * 109.46985 * 299.99539 * 16 15 14 21 21 C 1.52996 * 109.47090 * 300.00496 * 12 11 10 22 22 C 1.37687 * 109.87412 * 0.22868 * 6 5 4 23 23 C 1.39094 * 133.50803 * 180.39675 * 22 6 5 24 24 C 1.37786 * 119.77764 * 179.64335 * 23 22 6 25 25 C 1.38786 * 120.66663 * 359.76006 * 24 23 22 26 26 C 1.36664 * 120.52938 * 359.97438 * 25 24 23 27 27 C 1.39594 * 119.76694 * 0.02562 * 26 25 24 28 28 H 0.96698 * 114.00345 * 300.00365 * 1 2 3 29 29 H 1.08995 * 109.46805 * 239.99981 * 2 1 3 30 30 H 1.48502 * 109.99779 * 178.68125 * 3 2 1 31 31 H 1.48500 * 109.99960 * 299.99827 * 3 2 1 32 32 H 1.07999 * 125.03356 * 0.02562 * 5 4 2 33 33 H 1.08996 * 109.46939 * 25.02993 * 7 6 5 34 34 H 1.08998 * 109.46841 * 145.02740 * 7 6 5 35 35 H 0.97005 * 120.00238 * 359.97438 * 10 8 7 36 36 H 1.08996 * 109.47520 * 299.99636 * 11 10 8 37 37 H 1.09004 * 109.47413 * 59.99699 * 11 10 8 38 38 H 1.09002 * 109.47025 * 180.02562 * 14 12 11 39 39 H 1.08992 * 109.47095 * 299.99958 * 14 12 11 40 40 H 1.09004 * 109.47101 * 179.97438 * 15 14 12 41 41 H 1.08992 * 109.47126 * 299.99853 * 15 14 12 42 42 H 1.09004 * 109.46998 * 304.99646 * 18 16 15 43 43 H 1.08998 * 109.47012 * 64.99531 * 18 16 15 44 44 H 0.96695 * 114.00057 * 180.02562 * 19 18 16 45 45 H 1.08996 * 109.46679 * 179.97438 * 20 16 15 46 46 H 1.08992 * 109.47381 * 300.00386 * 20 16 15 47 47 H 1.09002 * 109.47536 * 59.99506 * 21 12 11 48 48 H 1.09002 * 109.47125 * 179.97438 * 21 12 11 49 49 H 1.08000 * 120.10715 * 359.40464 * 23 22 6 50 50 H 1.07999 * 119.66566 * 179.72777 * 24 23 22 51 51 H 1.08003 * 119.73826 * 180.02562 * 25 24 23 52 52 H 1.07997 * 120.11947 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4612 -0.1375 2.3228 6 7 2.8035 -1.0989 3.2343 7 6 3.4093 -0.8403 4.5429 8 6 4.9075 -0.9624 4.4360 9 8 5.4190 -1.2378 3.3713 10 7 5.6790 -0.7655 5.5234 11 6 7.1353 -0.8847 5.4196 12 6 7.7680 -0.6145 6.7863 13 9 7.2888 -1.5455 7.7141 14 6 9.2891 -0.7384 6.6777 15 6 9.8126 0.2801 5.6631 16 6 9.4475 1.6928 6.1238 17 1 9.8981 1.8852 7.0975 18 6 9.9716 2.7114 5.1095 19 8 9.7338 4.0338 5.5960 20 6 7.9264 1.8167 6.2323 21 6 7.4034 0.7983 7.2466 22 6 2.4992 -2.3459 2.7360 23 6 2.6302 -3.6361 3.2389 24 6 2.2165 -4.7107 2.4822 25 6 1.6648 -4.5194 1.2231 26 6 1.5218 -3.2600 0.7119 27 6 1.9342 -2.1569 1.4613 28 1 -0.3934 0.4417 0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 3.5346 1.7703 0.0321 31 1 1.5615 2.4679 -1.2085 32 1 2.5971 0.9248 2.4616 33 1 3.1492 0.1660 4.8711 34 1 3.0363 -1.5659 5.2657 35 1 5.2699 -0.5448 6.3748 36 1 7.3951 -1.8911 5.0913 37 1 7.5087 -0.1591 4.6969 38 1 9.7397 -0.5463 7.6514 39 1 9.5491 -1.7447 6.3496 40 1 10.8963 0.1922 5.5860 41 1 9.3620 0.0877 4.6895 42 1 11.0421 2.5639 4.9665 43 1 9.4559 2.5757 4.1588 44 1 10.0409 4.7324 5.0023 45 1 7.6664 2.8229 6.5609 46 1 7.4758 1.6242 5.2587 47 1 6.3197 0.8870 7.3239 48 1 7.8537 0.9907 8.2205 49 1 3.0583 -3.7953 4.2175 50 1 2.3231 -5.7120 2.8725 51 1 1.3452 -5.3724 0.6430 52 1 1.0913 -3.1188 -0.2684 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16921692_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:52:18 Heat of formation + Delta-G solvation = -106.847263 kcal Electronic energy + Delta-G solvation = -35484.022857 eV Core-core repulsion = 30750.569964 eV Total energy + Delta-G solvation = -4733.452892 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.184 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -48.84398 -42.54705 -40.91796 -39.91892 -38.11713 -37.66610 -37.43081 -35.68569 -34.10028 -32.46541 -32.01461 -31.45181 -30.24814 -29.39307 -27.66171 -25.91376 -25.36148 -24.05560 -23.72017 -22.70804 -22.05680 -21.68462 -20.71325 -20.27034 -18.73780 -18.50012 -18.16709 -17.86035 -17.75003 -17.29477 -16.97960 -16.48083 -16.41793 -16.34528 -16.02014 -15.92593 -15.74289 -15.61109 -15.35034 -15.08671 -14.86697 -14.72518 -14.63132 -14.36201 -14.24706 -14.17805 -14.06275 -13.75405 -13.61128 -13.30740 -13.14356 -13.03208 -12.72543 -12.61744 -12.60283 -12.26894 -12.23299 -12.17072 -12.12457 -11.83115 -11.55969 -11.37092 -11.21253 -11.10347 -10.83544 -10.57474 -10.31108 -10.28865 -9.17471 -8.64256 -5.05312 0.12543 0.61255 1.33491 1.38440 1.41808 1.63133 1.74381 1.99694 2.12680 2.92665 3.17089 3.22968 3.31933 3.40763 3.54817 3.60322 3.64314 3.67481 3.73670 3.82900 3.86735 3.97241 4.03288 4.14687 4.18351 4.19769 4.25964 4.28039 4.36120 4.39137 4.44611 4.47409 4.51041 4.54967 4.59769 4.67179 4.70124 4.76138 4.77136 4.86835 4.90832 4.94709 5.04835 5.07822 5.11325 5.11580 5.17736 5.31242 5.40922 5.48698 5.64074 5.71408 5.73898 6.16103 6.20277 6.37853 6.85892 6.89045 7.03045 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.042 4.042 3 Si 0.801 3.199 4 C -0.224 4.224 5 C 0.080 3.920 6 N -0.466 5.466 7 C 0.088 3.912 8 C 0.493 3.507 9 O -0.571 6.571 10 N -0.710 5.710 11 C 0.101 3.899 12 C 0.116 3.884 13 F -0.215 7.215 14 C -0.135 4.135 15 C -0.112 4.112 16 C -0.091 4.091 17 H 0.075 0.925 18 C 0.076 3.924 19 O -0.593 6.593 20 C -0.104 4.104 21 C -0.134 4.134 22 C 0.090 3.910 23 C -0.135 4.135 24 C -0.109 4.109 25 C -0.154 4.154 26 C -0.090 4.090 27 C -0.117 4.117 28 H 0.393 0.607 29 H 0.088 0.912 30 H -0.293 1.293 31 H -0.298 1.298 32 H 0.209 0.791 33 H 0.171 0.829 34 H 0.142 0.858 35 H 0.418 0.582 36 H 0.061 0.939 37 H 0.092 0.908 38 H 0.087 0.913 39 H 0.080 0.920 40 H 0.084 0.916 41 H 0.070 0.930 42 H 0.053 0.947 43 H 0.049 0.951 44 H 0.396 0.604 45 H 0.073 0.927 46 H 0.065 0.935 47 H 0.089 0.911 48 H 0.081 0.919 49 H 0.131 0.869 50 H 0.145 0.855 51 H 0.136 0.864 52 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.258 5.212 7.152 8.939 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.151 4.151 3 Si 0.707 3.293 4 C -0.231 4.231 5 C -0.045 4.045 6 N -0.148 5.148 7 C -0.036 4.036 8 C 0.279 3.721 9 O -0.449 6.449 10 N -0.365 5.365 11 C -0.023 4.023 12 C 0.097 3.903 13 F -0.195 7.195 14 C -0.173 4.173 15 C -0.149 4.149 16 C -0.109 4.109 17 H 0.094 0.906 18 C -0.001 4.001 19 O -0.401 6.401 20 C -0.141 4.141 21 C -0.172 4.172 22 C -0.015 4.015 23 C -0.155 4.155 24 C -0.128 4.128 25 C -0.172 4.172 26 C -0.109 4.109 27 C -0.121 4.121 28 H 0.243 0.757 29 H 0.105 0.895 30 H -0.221 1.221 31 H -0.225 1.225 32 H 0.226 0.774 33 H 0.188 0.812 34 H 0.160 0.840 35 H 0.256 0.744 36 H 0.080 0.920 37 H 0.110 0.890 38 H 0.105 0.895 39 H 0.099 0.901 40 H 0.102 0.898 41 H 0.089 0.911 42 H 0.072 0.928 43 H 0.067 0.933 44 H 0.245 0.755 45 H 0.092 0.908 46 H 0.084 0.916 47 H 0.108 0.892 48 H 0.100 0.900 49 H 0.149 0.851 50 H 0.162 0.838 51 H 0.154 0.846 52 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 2.050 5.014 6.267 8.284 hybrid contribution 0.477 -0.770 -0.592 1.082 sum 2.527 4.244 5.675 7.524 Atomic orbital electron populations 1.86453 1.17741 1.82390 1.50208 1.24591 0.84720 1.10449 0.95334 0.94130 0.76687 0.73511 0.85002 1.20785 1.11900 0.91815 0.98650 1.22082 0.98752 0.95355 0.88302 1.43445 1.51963 1.03810 1.15628 1.21993 0.88131 1.09426 0.84056 1.21498 0.90753 0.76276 0.83622 1.90809 1.75833 1.48379 1.29847 1.45748 1.06545 1.71544 1.12647 1.21984 0.80490 1.02758 0.97073 1.21204 0.95218 0.88186 0.85644 1.92875 1.89858 1.68425 1.68348 1.22047 0.92096 1.01140 1.02040 1.21537 1.02366 0.92526 0.98518 1.21209 0.96446 0.93639 0.99654 0.90616 1.22258 0.99360 0.82373 0.96154 1.86410 1.85758 1.16477 1.51434 1.21463 0.94589 0.99115 0.98975 1.22097 1.03058 0.91474 1.00546 1.18387 1.01600 0.87062 0.94442 1.20250 1.04644 0.89255 1.01357 1.21120 0.98277 0.99002 0.94367 1.20910 1.02352 0.97027 0.96958 1.20452 0.99262 0.91799 0.99398 1.19371 1.03877 0.93985 0.94872 0.75687 0.89455 1.22092 1.22527 0.77421 0.81172 0.84028 0.74404 0.92013 0.89033 0.89488 0.90132 0.89784 0.91095 0.92846 0.93304 0.75486 0.90834 0.91646 0.89242 0.90044 0.85104 0.83769 0.84623 0.86493 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.33 12.88 -148.98 -1.92 -4.25 16 2 C -0.04 -0.17 3.06 71.23 0.22 0.04 16 3 Si 0.80 -0.55 30.75 68.60 2.11 1.56 16 4 C -0.22 -1.28 5.58 -18.63 -0.10 -1.38 16 5 C 0.08 0.02 9.89 83.00 0.82 0.84 16 6 N -0.47 -0.70 2.27 -519.98 -1.18 -1.89 16 7 C 0.09 -0.63 6.48 85.63 0.56 -0.07 16 8 C 0.49 -0.25 7.90 87.66 0.69 0.45 16 9 O -0.57 -6.30 16.42 -3.03 -0.05 -6.35 16 10 N -0.71 3.71 5.19 -463.07 -2.40 1.31 16 11 C 0.10 -0.25 4.18 86.38 0.36 0.11 16 12 C 0.12 -0.50 1.08 -10.79 -0.01 -0.51 16 13 F -0.21 0.00 16.67 44.97 0.75 0.75 16 14 C -0.14 0.66 5.19 30.59 0.16 0.82 16 15 C -0.11 0.66 4.93 30.60 0.15 0.81 16 16 C -0.09 0.41 2.43 -10.79 -0.03 0.39 16 17 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 18 C 0.08 -0.31 6.43 71.98 0.46 0.15 16 19 O -0.59 1.01 13.20 -148.98 -1.97 -0.95 16 20 C -0.10 0.54 4.83 30.58 0.15 0.69 16 21 C -0.13 0.88 5.01 30.58 0.15 1.04 16 22 C 0.09 0.71 6.80 39.03 0.27 0.97 16 23 C -0.13 -0.85 10.00 22.37 0.22 -0.62 16 24 C -0.11 -0.65 10.01 22.29 0.22 -0.43 16 25 C -0.15 -1.18 9.97 22.03 0.22 -0.96 16 26 C -0.09 -0.96 10.05 22.23 0.22 -0.73 16 27 C -0.12 -1.23 6.35 -20.20 -0.13 -1.36 16 28 H 0.39 -1.98 8.70 -74.06 -0.64 -2.62 16 29 H 0.09 0.68 7.96 -2.39 -0.02 0.66 16 30 H -0.29 -1.62 7.11 99.48 0.71 -0.91 16 31 H -0.30 -1.89 7.11 99.48 0.71 -1.19 16 32 H 0.21 -1.83 6.35 -2.91 -0.02 -1.85 16 33 H 0.17 -2.78 8.12 -2.39 -0.02 -2.80 16 34 H 0.14 -1.61 8.14 -2.39 -0.02 -1.63 16 35 H 0.42 -4.54 7.26 -92.70 -0.67 -5.21 16 36 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 37 H 0.09 -0.17 4.81 -2.39 -0.01 -0.18 16 38 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 39 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 40 H 0.08 -0.58 8.14 -2.38 -0.02 -0.60 16 41 H 0.07 -0.37 6.43 -2.39 -0.02 -0.39 16 42 H 0.05 -0.29 8.14 -2.38 -0.02 -0.31 16 43 H 0.05 -0.23 8.14 -2.39 -0.02 -0.25 16 44 H 0.40 -3.62 9.12 -74.06 -0.68 -4.29 16 45 H 0.07 -0.23 7.82 -2.39 -0.02 -0.25 16 46 H 0.06 -0.31 6.43 -2.39 -0.02 -0.32 16 47 H 0.09 -0.86 6.86 -2.39 -0.02 -0.88 16 48 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 49 H 0.13 0.24 8.06 -2.91 -0.02 0.21 16 50 H 0.14 0.13 8.06 -2.91 -0.02 0.11 16 51 H 0.14 0.48 8.06 -2.91 -0.02 0.46 16 52 H 0.12 1.14 8.06 -2.91 -0.02 1.12 16 Total: 0.00 -31.13 417.09 -1.03 -32.17 By element: Atomic # 1 Polarization: -21.61 SS G_CDS: -0.98 Total: -22.59 kcal Atomic # 6 Polarization: -4.36 SS G_CDS: 4.61 Total: 0.25 kcal Atomic # 7 Polarization: 3.00 SS G_CDS: -3.58 Total: -0.58 kcal Atomic # 8 Polarization: -7.62 SS G_CDS: -3.93 Total: -11.55 kcal Atomic # 9 Polarization: 0.00 SS G_CDS: 0.75 Total: 0.75 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: 2.11 Total: 1.56 kcal Total: -31.13 -1.03 -32.17 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16921692_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.680 kcal (2) G-P(sol) polarization free energy of solvation -31.134 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.033 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.167 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.847 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds