Wall clock time and date at job start Sun Mar 7 2021 13:20:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35659 * 117.00591 * 2 1 4 4 C 1.38402 * 120.11587 * 359.97438 * 3 2 1 5 5 C 1.38733 * 120.03037 * 179.97438 * 4 3 2 6 6 O 1.35708 * 119.86020 * 180.02562 * 5 4 3 7 7 C 1.42896 * 117.00261 * 359.97438 * 6 5 4 8 8 C 1.39138 * 120.27063 * 0.02562 * 5 4 3 9 9 C 1.50706 * 119.87525 * 179.97438 * 8 5 4 10 10 O 1.42893 * 109.47206 * 75.02520 * 9 8 5 11 11 Si 1.86308 * 109.46857 * 195.02597 * 9 8 5 12 12 C 1.37587 * 120.24581 * 0.02562 * 8 5 4 13 13 C 1.39820 * 119.95930 * 0.23215 * 12 8 5 14 14 C 1.47298 * 120.13138 * 179.74590 * 13 12 8 15 15 O 1.21616 * 120.00041 * 179.97438 * 14 13 12 16 16 N 1.34780 * 120.00089 * 359.97438 * 14 13 12 17 17 C 1.46504 * 119.99839 * 179.97438 * 16 14 13 18 18 C 1.52991 * 109.47138 * 180.02562 * 17 16 14 19 19 H 1.09003 * 112.85430 * 45.33076 * 18 17 16 20 20 C 1.53782 * 113.61594 * 176.53072 * 18 17 16 21 21 C 1.53783 * 87.08229 * 139.98097 * 20 18 17 22 22 H 1.08999 * 113.61716 * 219.93739 * 21 20 18 23 23 N 1.46503 * 113.61510 * 89.11556 * 21 20 18 24 24 C 1.34429 * 126.82259 * 275.00015 * 23 21 20 25 25 N 1.30834 * 108.07735 * 179.97438 * 24 23 21 26 26 C 1.33242 * 109.83032 * 359.97438 * 25 24 23 27 27 N 1.30721 * 108.94099 * 359.75846 * 26 25 24 28 28 C 1.53785 * 113.61601 * 274.13816 * 18 17 16 29 29 H 1.08999 * 109.47652 * 300.00767 * 1 2 3 30 30 H 1.09006 * 109.46892 * 59.99851 * 1 2 3 31 31 H 1.08996 * 109.47717 * 180.02562 * 1 2 3 32 32 H 1.08002 * 119.98555 * 0.02562 * 4 3 2 33 33 H 1.09001 * 109.47014 * 299.99793 * 7 6 5 34 34 H 1.09002 * 109.47468 * 59.99979 * 7 6 5 35 35 H 1.09007 * 109.46968 * 179.97438 * 7 6 5 36 36 H 1.08992 * 109.47374 * 315.02182 * 9 8 5 37 37 H 0.96701 * 114.00227 * 300.00311 * 10 9 8 38 38 H 1.48500 * 109.99670 * 298.67887 * 11 9 8 39 39 H 1.48500 * 110.00171 * 60.00002 * 11 9 8 40 40 H 1.08002 * 120.01732 * 179.97438 * 12 8 5 41 41 H 0.96994 * 120.00310 * 0.02562 * 16 14 13 42 42 H 1.08999 * 109.47174 * 300.00084 * 17 16 14 43 43 H 1.08999 * 109.47280 * 60.00199 * 17 16 14 44 44 H 1.09000 * 113.61266 * 254.52450 * 20 18 17 45 45 H 1.08993 * 113.61233 * 25.43123 * 20 18 17 46 46 H 1.08006 * 125.96274 * 359.92679 * 24 23 21 47 47 H 1.07994 * 125.52960 * 180.02562 * 26 25 24 48 48 H 1.09000 * 113.61258 * 334.56733 * 28 18 17 49 49 H 1.08999 * 113.61476 * 105.46701 * 28 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3710 -0.0005 5 6 1.9254 3.6061 0.0000 6 8 1.1853 4.7436 0.0000 7 6 -0.2357 4.5931 -0.0011 8 6 3.3146 3.6833 0.0005 9 6 3.9917 5.0297 0.0005 10 8 3.8942 5.6119 1.3018 11 14 5.7865 4.8222 -0.4541 12 6 4.0725 2.5350 0.0000 13 6 3.4461 1.2849 -0.0060 14 6 4.2538 0.0532 -0.0122 15 8 3.7065 -1.0329 -0.0169 16 7 5.5995 0.1296 -0.0127 17 6 6.4028 -1.0955 -0.0183 18 6 7.8886 -0.7311 -0.0170 19 1 8.1318 0.0524 0.7008 20 6 8.8220 -1.9507 0.0627 21 6 9.7231 -1.2287 -0.9530 22 1 10.1466 -1.8902 -1.7087 23 7 10.7251 -0.3577 -0.3334 24 6 10.5524 0.9160 0.0604 25 7 11.6823 1.3419 0.5641 26 6 12.5951 0.3728 0.5100 27 7 12.0547 -0.6897 -0.0267 28 6 8.4625 -0.4793 -1.4214 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3634 -1.0276 0.0005 32 1 0.2149 2.3165 -0.0005 33 1 -0.5422 4.0444 -0.8917 34 1 -0.5436 4.0435 0.8883 35 1 -0.7052 5.5769 -0.0006 36 1 3.5058 5.6807 -0.7261 37 1 2.9860 5.7492 1.6043 38 1 6.4678 3.9623 0.5468 39 1 5.9015 4.2175 -1.8055 40 1 5.1506 2.5992 0.0000 41 1 6.0360 0.9958 -0.0085 42 1 6.1728 -1.6849 0.8693 43 1 6.1718 -1.6773 -0.9106 44 1 9.2850 -2.0830 1.0405 45 1 8.3764 -2.8674 -0.3234 46 1 9.6404 1.4882 -0.0250 47 1 13.6147 0.4508 0.8574 48 1 7.9184 -0.9931 -2.2139 49 1 8.6356 0.5744 -1.6399 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946164_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:20:20 Heat of formation + Delta-G solvation = 22.374535 kcal Electronic energy + Delta-G solvation = -34663.934337 eV Core-core repulsion = 29983.316363 eV Total energy + Delta-G solvation = -4680.617974 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -43.21470 -42.17806 -40.88966 -40.29875 -39.66031 -38.43780 -36.98387 -35.70587 -33.35891 -32.29464 -32.17442 -31.89197 -29.27176 -29.18944 -28.15828 -27.23707 -26.11995 -25.44739 -24.34324 -23.14619 -22.85464 -22.37168 -21.56630 -20.75762 -20.14842 -18.80262 -18.61676 -18.06536 -17.90174 -17.41028 -17.25118 -16.93185 -16.82943 -16.66680 -16.46409 -16.36348 -16.13022 -15.89490 -15.64104 -15.61392 -15.41750 -15.15304 -14.71130 -14.35798 -14.32967 -14.10655 -13.94251 -13.80919 -13.69307 -13.45243 -13.24601 -13.00346 -12.90180 -12.73398 -12.64074 -12.36580 -12.23460 -11.92690 -11.86166 -11.78812 -11.36333 -11.11795 -10.96730 -10.77947 -10.75193 -10.60192 -10.14541 -10.01591 -9.23446 -4.89509 -0.32891 0.02257 0.62146 1.18592 1.28989 1.55636 1.76463 1.82847 1.86864 2.02036 2.02790 2.05920 2.60888 2.86766 3.03863 3.28518 3.30783 3.32295 3.40736 3.43454 3.62071 3.63946 3.80005 3.84979 3.90257 3.93229 3.95170 3.98229 4.02293 4.04236 4.05439 4.12772 4.16498 4.30647 4.32389 4.37486 4.39502 4.42379 4.45298 4.58045 4.66105 4.68375 4.73803 4.82866 4.91698 4.94879 5.17113 5.29131 5.35226 5.46647 5.80333 5.84179 6.17030 6.42711 6.57362 7.11842 7.25879 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.232 3.768 4 C -0.308 4.308 5 C 0.210 3.790 6 O -0.306 6.306 7 C 0.022 3.978 8 C -0.188 4.188 9 C -0.069 4.069 10 O -0.535 6.535 11 Si 0.740 3.260 12 C -0.011 4.011 13 C -0.206 4.206 14 C 0.566 3.434 15 O -0.515 6.515 16 N -0.734 5.734 17 C 0.134 3.866 18 C -0.133 4.133 19 H 0.099 0.901 20 C -0.132 4.132 21 C 0.129 3.871 22 H 0.118 0.882 23 N -0.363 5.363 24 C 0.252 3.748 25 N -0.542 5.542 26 C 0.199 3.801 27 N -0.315 5.315 28 C -0.139 4.139 29 H 0.058 0.942 30 H 0.058 0.942 31 H 0.108 0.892 32 H 0.147 0.853 33 H 0.060 0.940 34 H 0.061 0.939 35 H 0.109 0.891 36 H 0.076 0.924 37 H 0.366 0.634 38 H -0.250 1.250 39 H -0.245 1.245 40 H 0.135 0.865 41 H 0.395 0.605 42 H 0.075 0.925 43 H 0.076 0.924 44 H 0.083 0.917 45 H 0.110 0.890 46 H 0.213 0.787 47 H 0.219 0.781 48 H 0.115 0.885 49 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.814 3.482 -2.267 6.359 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.183 3.817 4 C -0.328 4.328 5 C 0.162 3.838 6 O -0.218 6.218 7 C -0.072 4.072 8 C -0.189 4.189 9 C -0.178 4.178 10 O -0.341 6.341 11 Si 0.638 3.362 12 C -0.030 4.030 13 C -0.211 4.211 14 C 0.354 3.646 15 O -0.391 6.391 16 N -0.388 5.388 17 C 0.010 3.990 18 C -0.151 4.151 19 H 0.118 0.882 20 C -0.171 4.171 21 C 0.026 3.974 22 H 0.136 0.864 23 N -0.153 5.153 24 C -0.045 4.045 25 N -0.269 5.269 26 C -0.103 4.103 27 N -0.142 5.142 28 C -0.177 4.177 29 H 0.076 0.924 30 H 0.076 0.924 31 H 0.126 0.874 32 H 0.164 0.836 33 H 0.079 0.921 34 H 0.079 0.921 35 H 0.127 0.873 36 H 0.094 0.906 37 H 0.214 0.786 38 H -0.175 1.175 39 H -0.170 1.170 40 H 0.152 0.848 41 H 0.229 0.771 42 H 0.093 0.907 43 H 0.094 0.906 44 H 0.101 0.899 45 H 0.129 0.871 46 H 0.230 0.770 47 H 0.236 0.764 48 H 0.133 0.867 49 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -3.427 1.671 -2.543 4.583 hybrid contribution -2.268 -0.089 0.207 2.280 sum -5.696 1.583 -2.336 6.356 Atomic orbital electron populations 1.23255 0.78115 1.04965 1.01347 1.86401 1.21270 1.24926 1.85764 1.18695 0.90551 0.84509 0.87957 1.21300 1.01162 0.91428 1.18868 1.18717 0.90249 0.84869 0.89943 1.86038 1.19944 1.28719 1.87115 1.23234 0.77289 1.04842 1.01863 1.19457 0.90481 0.96760 1.12183 1.25108 1.13639 0.90348 0.88684 1.86713 1.32180 1.83260 1.31905 0.92802 0.75900 0.88525 0.78954 1.20748 0.98810 0.90287 0.93132 1.19071 0.90802 0.93537 1.17647 1.17773 0.81659 0.88587 0.76610 1.90856 1.71338 1.28585 1.48340 1.45874 1.06060 1.09666 1.77180 1.21320 0.87719 0.86713 1.03214 1.23012 0.94421 0.99884 0.97812 0.88238 1.23350 0.95364 0.97799 1.00544 1.22223 0.86183 0.92751 0.96293 0.86413 1.50252 1.08952 1.10713 1.45420 1.25950 0.99244 0.84823 0.94502 1.70610 0.99964 1.32014 1.24305 1.26116 1.00804 0.86108 0.97320 1.78113 0.89738 1.23995 1.22345 1.23597 0.94136 1.02103 0.97878 0.92353 0.92359 0.87356 0.83578 0.92123 0.92070 0.87259 0.90618 0.78625 1.17453 1.16958 0.84804 0.77073 0.90706 0.90568 0.89865 0.87128 0.77041 0.76437 0.86664 0.89912 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.95 8.56 -40.60 -0.35 -1.30 16 3 C 0.23 0.65 6.70 -38.73 -0.26 0.39 16 4 C -0.31 -0.18 8.01 -39.34 -0.31 -0.49 16 5 C 0.21 0.16 6.62 -39.06 -0.26 -0.10 16 6 O -0.31 0.18 9.36 -18.83 -0.18 0.01 16 7 C 0.02 -0.08 9.80 101.05 0.99 0.91 16 8 C -0.19 -0.22 5.28 -104.52 -0.55 -0.77 16 9 C -0.07 0.00 2.32 36.01 0.08 0.08 16 10 O -0.54 -0.49 12.65 -35.23 -0.45 -0.94 16 11 Si 0.74 -1.08 30.39 -169.99 -5.17 -6.25 16 12 C -0.01 -0.01 8.14 -39.23 -0.32 -0.33 16 13 C -0.21 -0.60 5.89 -104.84 -0.62 -1.21 16 14 C 0.57 2.08 7.76 -12.58 -0.10 1.98 16 15 O -0.52 -3.70 15.15 -16.66 -0.25 -3.95 16 16 N -0.73 -0.09 5.51 -61.43 -0.34 -0.43 16 17 C 0.13 -0.16 5.50 -4.04 -0.02 -0.18 16 18 C -0.13 0.43 3.34 -89.81 -0.30 0.13 16 19 H 0.10 -0.33 7.03 -51.93 -0.37 -0.69 16 20 C -0.13 0.36 7.44 -25.92 -0.19 0.17 16 21 C 0.13 -0.27 5.22 -67.02 -0.35 -0.61 16 22 H 0.12 -0.27 8.14 -51.93 -0.42 -0.69 16 23 N -0.36 -0.29 3.81 -55.23 -0.21 -0.50 16 24 C 0.25 0.12 10.82 -90.65 -0.98 -0.86 16 25 N -0.54 -1.66 11.19 -15.83 -0.18 -1.84 16 26 C 0.20 0.49 13.03 -91.80 -1.20 -0.70 16 27 N -0.32 -1.05 12.70 29.29 0.37 -0.67 16 28 C -0.14 0.56 6.90 -25.83 -0.18 0.38 16 29 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 30 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 31 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 32 H 0.15 -0.28 4.50 -52.49 -0.24 -0.52 16 33 H 0.06 -0.26 7.65 -51.93 -0.40 -0.65 16 34 H 0.06 -0.26 7.65 -51.93 -0.40 -0.66 16 35 H 0.11 -0.57 8.14 -51.93 -0.42 -0.99 16 36 H 0.08 -0.05 7.82 -51.93 -0.41 -0.46 16 37 H 0.37 -0.35 8.59 45.56 0.39 0.04 16 38 H -0.25 0.08 6.80 56.52 0.38 0.46 16 39 H -0.25 0.16 7.11 56.52 0.40 0.56 16 40 H 0.13 -0.07 3.24 -52.49 -0.17 -0.24 16 41 H 0.39 -0.75 6.49 -40.82 -0.26 -1.02 16 42 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 43 H 0.08 -0.07 7.88 -51.93 -0.41 -0.48 16 44 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.11 -0.43 8.10 -51.93 -0.42 -0.85 16 46 H 0.21 -0.71 6.75 -52.48 -0.35 -1.06 16 47 H 0.22 -0.17 8.06 -52.49 -0.42 -0.60 16 48 H 0.12 -0.55 7.92 -51.93 -0.41 -0.96 16 49 H 0.08 -0.38 7.02 -51.93 -0.36 -0.74 16 LS Contribution 400.50 15.07 6.04 6.04 Total: 0.00 -11.69 400.50 -10.63 -22.32 By element: Atomic # 1 Polarization: -5.88 SS G_CDS: -6.35 Total: -12.23 kcal Atomic # 6 Polarization: 3.32 SS G_CDS: -3.57 Total: -0.25 kcal Atomic # 7 Polarization: -3.09 SS G_CDS: -0.35 Total: -3.45 kcal Atomic # 8 Polarization: -4.96 SS G_CDS: -1.22 Total: -6.18 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.17 Total: -6.25 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -11.69 -10.63 -22.32 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946164_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.699 kcal (2) G-P(sol) polarization free energy of solvation -11.694 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.005 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.630 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.324 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.375 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds