Wall clock time and date at job start Sun Mar 7 2021 13:20:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35659 * 117.00591 * 2 1 4 4 C 1.38402 * 120.11587 * 359.97438 * 3 2 1 5 5 C 1.38733 * 120.03037 * 179.97438 * 4 3 2 6 6 O 1.35708 * 119.86020 * 180.02562 * 5 4 3 7 7 C 1.42896 * 117.00261 * 359.97438 * 6 5 4 8 8 C 1.39138 * 120.27063 * 0.02562 * 5 4 3 9 9 C 1.50706 * 119.87525 * 179.97438 * 8 5 4 10 10 O 1.42893 * 109.47206 * 75.02520 * 9 8 5 11 11 Si 1.86308 * 109.46857 * 195.02597 * 9 8 5 12 12 C 1.37587 * 120.24581 * 0.02562 * 8 5 4 13 13 C 1.39820 * 119.95930 * 0.23215 * 12 8 5 14 14 C 1.47298 * 120.13138 * 179.74590 * 13 12 8 15 15 O 1.21616 * 120.00041 * 179.97438 * 14 13 12 16 16 N 1.34780 * 120.00089 * 359.97438 * 14 13 12 17 17 C 1.46504 * 119.99839 * 179.97438 * 16 14 13 18 18 C 1.52991 * 109.47138 * 180.02562 * 17 16 14 19 19 H 1.09003 * 112.85430 * 45.33076 * 18 17 16 20 20 C 1.53782 * 113.61594 * 176.53072 * 18 17 16 21 21 C 1.53783 * 87.08229 * 139.98097 * 20 18 17 22 22 H 1.08999 * 113.61716 * 219.93739 * 21 20 18 23 23 N 1.46503 * 113.61510 * 89.11556 * 21 20 18 24 24 C 1.34429 * 126.82259 * 275.00015 * 23 21 20 25 25 N 1.30834 * 108.07735 * 179.97438 * 24 23 21 26 26 C 1.33242 * 109.83032 * 359.97438 * 25 24 23 27 27 N 1.30721 * 108.94099 * 359.75846 * 26 25 24 28 28 C 1.53785 * 113.61601 * 274.13816 * 18 17 16 29 29 H 1.08999 * 109.47652 * 300.00767 * 1 2 3 30 30 H 1.09006 * 109.46892 * 59.99851 * 1 2 3 31 31 H 1.08996 * 109.47717 * 180.02562 * 1 2 3 32 32 H 1.08002 * 119.98555 * 0.02562 * 4 3 2 33 33 H 1.09001 * 109.47014 * 299.99793 * 7 6 5 34 34 H 1.09002 * 109.47468 * 59.99979 * 7 6 5 35 35 H 1.09007 * 109.46968 * 179.97438 * 7 6 5 36 36 H 1.08992 * 109.47374 * 315.02182 * 9 8 5 37 37 H 0.96701 * 114.00227 * 300.00311 * 10 9 8 38 38 H 1.48500 * 109.99670 * 298.67887 * 11 9 8 39 39 H 1.48500 * 110.00171 * 60.00002 * 11 9 8 40 40 H 1.08002 * 120.01732 * 179.97438 * 12 8 5 41 41 H 0.96994 * 120.00310 * 0.02562 * 16 14 13 42 42 H 1.08999 * 109.47174 * 300.00084 * 17 16 14 43 43 H 1.08999 * 109.47280 * 60.00199 * 17 16 14 44 44 H 1.09000 * 113.61266 * 254.52450 * 20 18 17 45 45 H 1.08993 * 113.61233 * 25.43123 * 20 18 17 46 46 H 1.08006 * 125.96274 * 359.92679 * 24 23 21 47 47 H 1.07994 * 125.52960 * 180.02562 * 26 25 24 48 48 H 1.09000 * 113.61258 * 334.56733 * 28 18 17 49 49 H 1.08999 * 113.61476 * 105.46701 * 28 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3710 -0.0005 5 6 1.9254 3.6061 0.0000 6 8 1.1853 4.7436 0.0000 7 6 -0.2357 4.5931 -0.0011 8 6 3.3146 3.6833 0.0005 9 6 3.9917 5.0297 0.0005 10 8 3.8942 5.6119 1.3018 11 14 5.7865 4.8222 -0.4541 12 6 4.0725 2.5350 0.0000 13 6 3.4461 1.2849 -0.0060 14 6 4.2538 0.0532 -0.0122 15 8 3.7065 -1.0329 -0.0169 16 7 5.5995 0.1296 -0.0127 17 6 6.4028 -1.0955 -0.0183 18 6 7.8886 -0.7311 -0.0170 19 1 8.1318 0.0524 0.7008 20 6 8.8220 -1.9507 0.0627 21 6 9.7231 -1.2287 -0.9530 22 1 10.1466 -1.8902 -1.7087 23 7 10.7251 -0.3577 -0.3334 24 6 10.5524 0.9160 0.0604 25 7 11.6823 1.3419 0.5641 26 6 12.5951 0.3728 0.5100 27 7 12.0547 -0.6897 -0.0267 28 6 8.4625 -0.4793 -1.4214 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3634 -1.0276 0.0005 32 1 0.2149 2.3165 -0.0005 33 1 -0.5422 4.0444 -0.8917 34 1 -0.5436 4.0435 0.8883 35 1 -0.7052 5.5769 -0.0006 36 1 3.5058 5.6807 -0.7261 37 1 2.9860 5.7492 1.6043 38 1 6.4678 3.9623 0.5468 39 1 5.9015 4.2175 -1.8055 40 1 5.1506 2.5992 0.0000 41 1 6.0360 0.9958 -0.0085 42 1 6.1728 -1.6849 0.8693 43 1 6.1718 -1.6773 -0.9106 44 1 9.2850 -2.0830 1.0405 45 1 8.3764 -2.8674 -0.3234 46 1 9.6404 1.4882 -0.0250 47 1 13.6147 0.4508 0.8574 48 1 7.9184 -0.9931 -2.2139 49 1 8.6356 0.5744 -1.6399 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946164_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:20:19 Heat of formation + Delta-G solvation = 21.589533 kcal Electronic energy + Delta-G solvation = -34663.968378 eV Core-core repulsion = 29983.316363 eV Total energy + Delta-G solvation = -4680.652015 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -43.24086 -42.21054 -40.88960 -40.25100 -39.72845 -38.42731 -37.02060 -35.82421 -33.39535 -32.32423 -32.24076 -31.91943 -29.22328 -29.02464 -28.04604 -26.99942 -26.11125 -25.42520 -24.35582 -23.15447 -22.87741 -22.35986 -21.65634 -20.67900 -20.13064 -18.82464 -18.62222 -17.98922 -17.85721 -17.41945 -17.24110 -16.93203 -16.80008 -16.61364 -16.49220 -16.33603 -16.14457 -15.83928 -15.66984 -15.56813 -15.40091 -15.14847 -14.71167 -14.39763 -14.25305 -14.03510 -13.91469 -13.64485 -13.54334 -13.41767 -13.22098 -13.01749 -12.69161 -12.59691 -12.58604 -12.19213 -12.15373 -11.79449 -11.75883 -11.70328 -11.36225 -11.15183 -11.06794 -10.90271 -10.87501 -10.60078 -10.25918 -10.02831 -9.29050 -4.75515 -0.40068 -0.03351 0.58750 1.25292 1.39030 1.59714 1.71496 1.93282 1.93474 1.98346 1.98779 2.08361 2.48936 3.04860 3.23145 3.31133 3.40399 3.42034 3.48492 3.59009 3.62616 3.65807 3.86683 3.95892 3.98755 4.06427 4.08197 4.10863 4.15813 4.22335 4.23771 4.27576 4.32856 4.41828 4.48898 4.57921 4.61814 4.63819 4.65550 4.66364 4.70377 4.80241 4.85902 4.87373 4.93558 5.08495 5.16215 5.28242 5.31922 5.40986 5.86298 5.91584 6.17735 6.36865 6.64751 7.05310 7.10199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.304 6.304 3 C 0.215 3.785 4 C -0.305 4.305 5 C 0.209 3.791 6 O -0.312 6.312 7 C 0.012 3.988 8 C -0.199 4.199 9 C -0.081 4.081 10 O -0.547 6.547 11 Si 0.787 3.213 12 C -0.011 4.011 13 C -0.229 4.229 14 C 0.561 3.439 15 O -0.560 6.560 16 N -0.721 5.721 17 C 0.135 3.865 18 C -0.122 4.122 19 H 0.104 0.896 20 C -0.128 4.128 21 C 0.120 3.880 22 H 0.120 0.880 23 N -0.363 5.363 24 C 0.254 3.746 25 N -0.575 5.575 26 C 0.191 3.809 27 N -0.350 5.350 28 C -0.125 4.125 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.114 0.886 32 H 0.169 0.831 33 H 0.068 0.932 34 H 0.069 0.931 35 H 0.126 0.874 36 H 0.082 0.918 37 H 0.372 0.628 38 H -0.264 1.264 39 H -0.254 1.254 40 H 0.147 0.853 41 H 0.406 0.594 42 H 0.060 0.940 43 H 0.076 0.924 44 H 0.065 0.935 45 H 0.123 0.877 46 H 0.247 0.753 47 H 0.238 0.762 48 H 0.128 0.872 49 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.592 4.828 -2.861 7.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.215 6.215 3 C 0.166 3.834 4 C -0.324 4.324 5 C 0.161 3.839 6 O -0.223 6.223 7 C -0.082 4.082 8 C -0.201 4.201 9 C -0.188 4.188 10 O -0.353 6.353 11 Si 0.685 3.315 12 C -0.029 4.029 13 C -0.233 4.233 14 C 0.350 3.650 15 O -0.440 6.440 16 N -0.374 5.374 17 C 0.012 3.988 18 C -0.141 4.141 19 H 0.122 0.878 20 C -0.167 4.167 21 C 0.017 3.983 22 H 0.137 0.863 23 N -0.153 5.153 24 C -0.042 4.042 25 N -0.302 5.302 26 C -0.112 4.112 27 N -0.178 5.178 28 C -0.164 4.164 29 H 0.090 0.910 30 H 0.092 0.908 31 H 0.132 0.868 32 H 0.186 0.814 33 H 0.087 0.913 34 H 0.088 0.912 35 H 0.144 0.856 36 H 0.100 0.900 37 H 0.221 0.779 38 H -0.190 1.190 39 H -0.179 1.179 40 H 0.164 0.836 41 H 0.242 0.758 42 H 0.079 0.921 43 H 0.094 0.906 44 H 0.084 0.916 45 H 0.141 0.859 46 H 0.263 0.737 47 H 0.254 0.746 48 H 0.146 0.854 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -4.212 3.043 -3.140 6.071 hybrid contribution -2.141 -0.478 0.408 2.231 sum -6.353 2.565 -2.731 7.375 Atomic orbital electron populations 1.23502 0.76300 1.05915 1.02757 1.86362 1.23392 1.25725 1.85986 1.18956 0.90893 0.85002 0.88546 1.21475 1.02188 0.90646 1.18100 1.18835 0.90455 0.85323 0.89247 1.86044 1.21446 1.28158 1.86694 1.23522 0.75686 1.06306 1.02688 1.19706 0.91015 0.97199 1.12145 1.25391 1.15080 0.89852 0.88504 1.86678 1.32920 1.83302 1.32395 0.92242 0.74055 0.87687 0.77520 1.20865 0.99489 0.89794 0.92795 1.19196 0.91244 0.93731 1.19148 1.18021 0.82587 0.88320 0.76068 1.90819 1.72324 1.30038 1.50812 1.45812 1.05191 1.10714 1.75684 1.21351 0.88716 0.86152 1.02562 1.22923 0.92640 0.99782 0.98757 0.87797 1.23347 0.95184 0.98566 0.99571 1.22456 0.86238 0.93135 0.96465 0.86250 1.50392 1.08551 1.11178 1.45192 1.26583 0.99677 0.84792 0.93110 1.70601 1.01004 1.32896 1.25743 1.26571 1.01717 0.85862 0.97011 1.78031 0.91264 1.24971 1.23488 1.23601 0.92437 1.02869 0.97443 0.90954 0.90829 0.86781 0.81392 0.91314 0.91202 0.85552 0.89955 0.77910 1.18987 1.17891 0.83589 0.75772 0.92145 0.90555 0.91579 0.85905 0.73724 0.74606 0.85405 0.88586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.30 -2.52 8.56 -68.79 -0.59 -3.11 16 3 C 0.22 1.41 6.70 22.82 0.15 1.56 16 4 C -0.30 -0.31 8.01 22.43 0.18 -0.13 16 5 C 0.21 0.25 6.62 22.60 0.15 0.40 16 6 O -0.31 0.64 9.36 -90.29 -0.84 -0.20 16 7 C 0.01 -0.10 9.80 113.37 1.11 1.01 16 8 C -0.20 -0.44 5.28 -19.80 -0.10 -0.54 16 9 C -0.08 0.03 2.32 71.24 0.17 0.20 16 10 O -0.55 -0.77 12.65 -148.98 -1.89 -2.65 16 11 Si 0.79 -2.99 30.39 68.60 2.09 -0.90 16 12 C -0.01 -0.03 8.14 22.50 0.18 0.15 16 13 C -0.23 -1.56 5.89 -20.00 -0.12 -1.68 16 14 C 0.56 4.88 7.76 86.63 0.67 5.56 16 15 O -0.56 -9.24 15.15 16.88 0.26 -8.99 16 16 N -0.72 -0.48 5.51 -466.50 -2.57 -3.04 16 17 C 0.14 -0.27 5.50 86.38 0.47 0.20 16 18 C -0.12 0.86 3.34 -10.27 -0.03 0.82 16 19 H 0.10 -0.78 7.03 -2.39 -0.02 -0.80 16 20 C -0.13 0.69 7.44 31.12 0.23 0.92 16 21 C 0.12 -0.54 5.22 45.58 0.24 -0.30 16 22 H 0.12 -0.56 8.14 -2.39 -0.02 -0.58 16 23 N -0.36 -0.57 3.81 -328.64 -1.25 -1.83 16 24 C 0.25 0.12 10.82 180.36 1.95 2.07 16 25 N -0.57 -3.62 11.19 -203.99 -2.28 -5.90 16 26 C 0.19 1.08 13.03 180.76 2.36 3.43 16 27 N -0.35 -2.58 12.70 -61.24 -0.78 -3.36 16 28 C -0.13 1.17 6.90 31.18 0.22 1.39 16 29 H 0.07 -0.38 7.66 -2.39 -0.02 -0.39 16 30 H 0.07 -0.40 7.66 -2.38 -0.02 -0.42 16 31 H 0.11 -0.42 8.14 -2.39 -0.02 -0.44 16 32 H 0.17 -0.80 4.50 -2.91 -0.01 -0.81 16 33 H 0.07 -0.68 7.65 -2.39 -0.02 -0.70 16 34 H 0.07 -0.70 7.65 -2.39 -0.02 -0.72 16 35 H 0.13 -1.53 8.14 -2.38 -0.02 -1.55 16 36 H 0.08 -0.17 7.82 -2.39 -0.02 -0.19 16 37 H 0.37 -0.81 8.59 -74.06 -0.64 -1.45 16 38 H -0.26 0.40 6.80 99.48 0.68 1.08 16 39 H -0.25 0.60 7.11 99.48 0.71 1.31 16 40 H 0.15 -0.18 3.24 -2.91 -0.01 -0.18 16 41 H 0.41 -1.69 6.49 -92.71 -0.60 -2.29 16 42 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 43 H 0.08 -0.12 7.88 -2.39 -0.02 -0.14 16 44 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 45 H 0.12 -0.97 8.10 -2.39 -0.02 -0.99 16 46 H 0.25 -2.05 6.75 -2.91 -0.02 -2.07 16 47 H 0.24 -0.19 8.06 -2.91 -0.02 -0.21 16 48 H 0.13 -1.43 7.92 -2.39 -0.02 -1.45 16 49 H 0.10 -1.09 7.02 -2.39 -0.02 -1.10 16 Total: 0.00 -28.87 400.50 0.88 -27.99 By element: Atomic # 1 Polarization: -13.96 SS G_CDS: -0.20 Total: -14.16 kcal Atomic # 6 Polarization: 7.22 SS G_CDS: 8.94 Total: 16.16 kcal Atomic # 7 Polarization: -7.25 SS G_CDS: -6.88 Total: -14.13 kcal Atomic # 8 Polarization: -11.89 SS G_CDS: -3.06 Total: -14.95 kcal Atomic # 14 Polarization: -2.99 SS G_CDS: 2.09 Total: -0.90 kcal Total: -28.87 0.88 -27.99 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946164_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.579 kcal (2) G-P(sol) polarization free energy of solvation -28.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.712 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.878 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.989 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.590 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds