Wall clock time and date at job start Sun Mar 7 2021 13:21:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35656 * 116.99527 * 2 1 4 4 C 1.40143 * 120.14788 * 179.97438 * 3 2 1 5 5 C 1.47536 * 120.19274 * 0.05428 * 4 3 2 6 6 O 1.21591 * 119.99593 * 359.97058 * 5 4 3 7 7 N 1.34773 * 120.00250 * 179.97438 * 5 4 3 8 8 C 1.46493 * 120.00049 * 179.97438 * 7 5 4 9 9 C 1.53004 * 109.47363 * 179.97438 * 8 7 5 10 10 H 1.09006 * 112.84798 * 43.79975 * 9 8 7 11 11 C 1.53775 * 113.61880 * 174.99630 * 9 8 7 12 12 C 1.53781 * 87.08053 * 139.98038 * 11 9 8 13 13 H 1.09004 * 113.61198 * 219.93564 * 12 11 9 14 14 N 1.46505 * 113.61480 * 89.11992 * 12 11 9 15 15 C 1.34420 * 126.81965 * 275.00053 * 14 12 11 16 16 N 1.30828 * 108.08006 * 179.97438 * 15 14 12 17 17 C 1.33243 * 109.82705 * 359.97438 * 16 15 14 18 18 N 1.30720 * 108.94707 * 359.75876 * 17 16 15 19 19 C 1.53776 * 87.08171 * 334.56730 * 12 11 9 20 20 C 1.39709 * 119.61686 * 180.02562 * 4 3 2 21 21 C 1.37782 * 119.90703 * 0.26302 * 20 4 3 22 22 C 1.50705 * 119.85069 * 179.74141 * 21 20 4 23 23 O 1.42901 * 109.46650 * 64.99980 * 22 21 20 24 24 Si 1.86301 * 109.47300 * 184.99761 * 22 21 20 25 25 C 1.38548 * 120.30001 * 359.48541 * 21 20 4 26 26 C 1.38053 * 120.39153 * 0.51341 * 25 21 20 27 27 H 1.08992 * 109.47448 * 299.99373 * 1 2 3 28 28 H 1.08998 * 109.47474 * 60.00057 * 1 2 3 29 29 H 1.09005 * 109.46824 * 179.97438 * 1 2 3 30 30 H 0.96999 * 119.99664 * 359.97438 * 7 5 4 31 31 H 1.09008 * 109.47086 * 299.99451 * 8 7 5 32 32 H 1.09000 * 109.47809 * 59.99561 * 8 7 5 33 33 H 1.08996 * 113.61950 * 254.53322 * 11 9 8 34 34 H 1.09004 * 113.61498 * 25.43695 * 11 9 8 35 35 H 1.08002 * 125.96542 * 359.92043 * 15 14 12 36 36 H 1.07999 * 125.53191 * 180.02562 * 17 16 15 37 37 H 1.09002 * 113.62068 * 270.88092 * 19 12 11 38 38 H 1.08999 * 113.61314 * 139.98262 * 19 12 11 39 39 H 1.08002 * 120.04298 * 179.97438 * 20 4 3 40 40 H 1.09004 * 109.46997 * 305.00000 * 22 21 20 41 41 H 0.96693 * 114.00552 * 59.99954 * 23 22 21 42 42 H 1.48504 * 109.99614 * 58.68226 * 24 22 21 43 43 H 1.48500 * 109.99858 * 180.02562 * 24 22 21 44 44 H 1.08007 * 119.80253 * 180.23666 * 25 21 20 45 45 H 1.07997 * 119.95901 * 179.76501 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0447 1.2088 0.0000 4 6 3.4440 1.2858 0.0005 5 6 4.2550 0.0533 -0.0001 6 8 3.7095 -1.0333 -0.0005 7 7 5.6004 0.1319 -0.0001 8 6 6.4057 -1.0919 -0.0002 9 6 7.8911 -0.7251 -0.0008 10 1 8.1285 0.0804 0.6943 11 6 8.8257 -1.9400 0.1220 12 6 9.7321 -1.2479 -0.9097 13 1 10.1613 -1.9316 -1.6421 14 7 10.7288 -0.3567 -0.3109 15 6 10.5518 0.9281 0.0426 16 7 11.6778 1.3712 0.5400 17 6 12.5924 0.4024 0.5212 18 7 12.0571 -0.6769 0.0139 19 6 8.4739 -0.5181 -1.4087 20 6 4.0666 2.5365 0.0011 21 6 3.3036 3.6837 0.0066 22 6 3.9765 5.0322 0.0130 23 8 4.6987 5.2099 -1.2072 24 14 2.6882 6.3685 0.1724 25 6 1.9205 3.6033 0.0008 26 6 1.2923 2.3740 0.0002 27 1 -0.3634 0.5137 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 6.0356 0.9988 0.0000 31 1 6.1762 -1.6778 0.8899 32 1 6.1761 -1.6779 -0.8901 33 1 9.2828 -2.0417 1.1062 34 1 8.3839 -2.8690 -0.2386 35 1 9.6395 1.4959 -0.0659 36 1 13.6097 0.4928 0.8723 37 1 7.9358 -1.0582 -2.1878 38 1 8.6469 0.5283 -1.6602 39 1 5.1445 2.6039 0.0019 40 1 4.6662 5.0900 0.8552 41 1 4.1469 5.1702 -2.0002 42 1 1.9090 6.1762 1.4219 43 1 3.3391 7.7032 0.1794 44 1 1.3302 4.5078 0.0013 45 1 0.2137 2.3195 -0.0005 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946164_12496546.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:21:09 Heat of formation + Delta-G solvation = 57.930003 kcal Electronic energy + Delta-G solvation = -29748.457767 eV Core-core repulsion = 25543.601404 eV Total energy + Delta-G solvation = -4204.856363 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -43.21549 -41.79092 -40.69365 -39.66493 -39.24840 -37.21232 -35.70257 -33.46141 -32.69693 -32.07200 -31.91213 -29.27281 -28.51332 -27.22167 -26.26152 -25.68860 -24.58740 -23.11538 -22.71158 -22.31381 -21.52806 -20.73501 -19.59288 -18.48473 -18.14076 -18.01620 -17.52078 -16.95839 -16.81582 -16.72154 -16.41091 -16.23807 -16.11230 -15.95196 -15.84964 -15.61273 -15.37812 -14.81725 -14.70320 -14.61581 -14.41092 -14.04848 -13.79962 -13.74817 -13.57113 -13.23977 -13.19631 -12.99862 -12.48702 -12.35761 -12.22418 -12.12125 -11.92212 -11.88054 -11.84646 -10.96951 -10.90597 -10.76211 -10.61520 -10.47628 -10.30224 -10.06563 -9.33498 -5.14223 -0.30765 0.13779 0.62381 1.18587 1.18964 1.53591 1.81969 1.89189 2.02207 2.05129 2.17061 2.67886 2.88558 3.04639 3.29436 3.32400 3.32734 3.40962 3.45850 3.56304 3.60447 3.80193 3.88947 3.94622 4.01855 4.02817 4.14808 4.15840 4.18123 4.28105 4.33463 4.40664 4.42060 4.43600 4.52575 4.56615 4.60460 4.68625 4.74777 4.83113 4.92179 5.01411 5.17888 5.29185 5.36672 5.44357 5.46334 5.80855 6.22828 6.45959 6.46762 7.11801 7.27492 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.561 3.439 6 O -0.515 6.515 7 N -0.731 5.731 8 C 0.133 3.867 9 C -0.130 4.130 10 H 0.099 0.901 11 C -0.133 4.133 12 C 0.128 3.872 13 H 0.117 0.883 14 N -0.362 5.362 15 C 0.252 3.748 16 N -0.544 5.544 17 C 0.199 3.801 18 N -0.315 5.315 19 C -0.137 4.137 20 C -0.020 4.020 21 C -0.169 4.169 22 C -0.062 4.062 23 O -0.540 6.540 24 Si 0.682 3.318 25 C -0.045 4.045 26 C -0.214 4.214 27 H 0.058 0.942 28 H 0.059 0.941 29 H 0.105 0.895 30 H 0.398 0.602 31 H 0.073 0.927 32 H 0.075 0.925 33 H 0.082 0.918 34 H 0.110 0.890 35 H 0.215 0.785 36 H 0.219 0.781 37 H 0.115 0.885 38 H 0.083 0.917 39 H 0.134 0.866 40 H 0.115 0.885 41 H 0.380 0.620 42 H -0.257 1.257 43 H -0.253 1.253 44 H 0.134 0.866 45 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.964 2.059 -2.828 6.073 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.190 6.190 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.349 3.651 6 O -0.391 6.391 7 N -0.385 5.385 8 C 0.010 3.990 9 C -0.149 4.149 10 H 0.118 0.882 11 C -0.172 4.172 12 C 0.025 3.975 13 H 0.135 0.865 14 N -0.153 5.153 15 C -0.044 4.044 16 N -0.271 5.271 17 C -0.104 4.104 18 N -0.142 5.142 19 C -0.175 4.175 20 C -0.038 4.038 21 C -0.169 4.169 22 C -0.173 4.173 23 O -0.345 6.345 24 Si 0.584 3.416 25 C -0.063 4.063 26 C -0.232 4.232 27 H 0.077 0.923 28 H 0.078 0.922 29 H 0.124 0.876 30 H 0.233 0.767 31 H 0.091 0.909 32 H 0.093 0.907 33 H 0.100 0.900 34 H 0.128 0.872 35 H 0.231 0.769 36 H 0.235 0.765 37 H 0.133 0.867 38 H 0.102 0.898 39 H 0.152 0.848 40 H 0.132 0.868 41 H 0.227 0.773 42 H -0.182 1.182 43 H -0.178 1.178 44 H 0.151 0.849 45 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -4.684 1.355 -1.930 5.244 hybrid contribution 0.131 0.264 0.312 0.429 sum -4.554 1.619 -1.618 5.097 Atomic orbital electron populations 1.23240 0.78139 1.04794 1.01477 1.86381 1.21241 1.25180 1.86159 1.19095 0.90953 0.85077 0.90485 1.19321 0.90897 0.93858 1.13835 1.17939 0.81771 0.88696 0.76728 1.90858 1.71504 1.28612 1.48079 1.45862 1.05974 1.09763 1.76904 1.21312 0.87731 0.86853 1.03104 1.22989 0.94335 0.99849 0.97712 0.88246 1.23363 0.95380 0.98061 1.00385 1.22195 0.86382 0.92515 0.96457 0.86484 1.50249 1.09065 1.09957 1.46028 1.25963 0.99278 0.84434 0.94772 1.70607 1.00057 1.32323 1.24065 1.26109 1.00775 0.85939 0.97569 1.78116 0.89915 1.23986 1.22207 1.23553 0.93959 1.02336 0.97687 1.20950 0.99805 0.89859 0.93222 1.20126 0.93554 0.96061 1.07185 1.24955 1.03128 0.98908 0.90276 1.86504 1.37912 1.95049 1.15084 0.94869 0.81174 0.77802 0.87734 1.20982 0.93627 0.97262 0.94456 1.21242 1.00793 0.91563 1.09633 0.92323 0.92222 0.87648 0.76661 0.90851 0.90662 0.89953 0.87164 0.76908 0.76486 0.86704 0.89821 0.84784 0.86797 0.77296 1.18174 1.17755 0.84858 0.84091 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.28 -0.79 8.57 -40.55 -0.35 -1.14 16 3 C 0.19 0.30 6.70 -38.69 -0.26 0.04 16 4 C -0.18 -0.22 5.89 -104.84 -0.62 -0.84 16 5 C 0.56 1.40 7.76 -12.47 -0.10 1.31 16 6 O -0.51 -3.35 15.16 -16.59 -0.25 -3.60 16 7 N -0.73 0.88 5.51 -61.35 -0.34 0.54 16 8 C 0.13 -0.26 5.51 -4.04 -0.02 -0.28 16 9 C -0.13 0.51 3.35 -89.81 -0.30 0.21 16 10 H 0.10 -0.41 7.03 -51.93 -0.37 -0.77 16 11 C -0.13 0.41 7.44 -25.92 -0.19 0.22 16 12 C 0.13 -0.30 5.21 -67.12 -0.35 -0.65 16 13 H 0.12 -0.28 8.14 -51.93 -0.42 -0.71 16 14 N -0.36 -0.21 3.81 -55.32 -0.21 -0.42 16 15 C 0.25 0.05 10.82 -90.67 -0.98 -0.93 16 16 N -0.54 -1.62 11.19 -15.83 -0.18 -1.79 16 17 C 0.20 0.48 13.03 -91.80 -1.20 -0.71 16 18 N -0.32 -1.02 12.70 29.29 0.37 -0.65 16 19 C -0.14 0.62 6.89 -25.92 -0.18 0.44 16 20 C -0.02 0.02 9.16 -39.20 -0.36 -0.34 16 21 C -0.17 0.27 5.35 -104.67 -0.56 -0.29 16 22 C -0.06 0.13 2.79 36.01 0.10 0.23 16 23 O -0.54 0.97 12.83 -35.23 -0.45 0.51 16 24 Si 0.68 -1.65 29.79 -169.99 -5.06 -6.71 16 25 C -0.05 0.09 8.65 -39.54 -0.34 -0.25 16 26 C -0.21 0.22 9.03 -39.48 -0.36 -0.14 16 27 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 28 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 29 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.40 -1.47 6.50 -40.82 -0.27 -1.74 16 31 H 0.07 -0.04 8.14 -51.92 -0.42 -0.46 16 32 H 0.08 -0.11 7.84 -51.93 -0.41 -0.52 16 33 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.11 -0.46 8.10 -51.93 -0.42 -0.88 16 35 H 0.21 -0.81 6.75 -52.49 -0.35 -1.17 16 36 H 0.22 -0.17 8.06 -52.49 -0.42 -0.59 16 37 H 0.11 -0.60 7.90 -51.93 -0.41 -1.01 16 38 H 0.08 -0.42 7.03 -51.93 -0.36 -0.79 16 39 H 0.13 -0.42 6.40 -52.49 -0.34 -0.76 16 40 H 0.11 -0.21 7.96 -51.93 -0.41 -0.62 16 41 H 0.38 -2.04 8.70 45.56 0.40 -1.64 16 42 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 43 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 44 H 0.13 -0.56 4.88 -52.48 -0.26 -0.82 16 45 H 0.14 -0.45 6.30 -52.49 -0.33 -0.78 16 LS Contribution 372.51 15.07 5.61 5.61 Total: 0.00 -12.51 372.51 -11.21 -23.72 By element: Atomic # 1 Polarization: -9.44 SS G_CDS: -5.63 Total: -15.07 kcal Atomic # 6 Polarization: 3.71 SS G_CDS: -4.72 Total: -1.01 kcal Atomic # 7 Polarization: -1.96 SS G_CDS: -0.35 Total: -2.32 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -1.05 Total: -4.23 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.06 Total: -6.71 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -12.51 -11.21 -23.72 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946164_12496546.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.653 kcal (2) G-P(sol) polarization free energy of solvation -12.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.723 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds